Protein–RNA interactions for Protein: Q7RTU4

BHLHA9, Class A basic helix-loop-helix protein 9, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BHLHA9Q7RTU4 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
BHLHA9Q7RTU4 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
BHLHA9Q7RTU4 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC20.92■□□□□ 0.94
BHLHA9Q7RTU4 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC20.92■□□□□ 0.94
BHLHA9Q7RTU4 ABHD17AP6-201ENST00000458502 1044 ntBASIC20.92■□□□□ 0.94
BHLHA9Q7RTU4 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
BHLHA9Q7RTU4 AC098590.1-201ENST00000468126 897 ntBASIC20.92■□□□□ 0.94
BHLHA9Q7RTU4 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
BHLHA9Q7RTU4 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
BHLHA9Q7RTU4 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
BHLHA9Q7RTU4 AC069544.1-201ENST00000609399 999 ntBASIC20.92■□□□□ 0.94
BHLHA9Q7RTU4 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
BHLHA9Q7RTU4 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
BHLHA9Q7RTU4 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20.92■□□□□ 0.94
BHLHA9Q7RTU4 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC20.92■□□□□ 0.94
BHLHA9Q7RTU4 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
BHLHA9Q7RTU4 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
BHLHA9Q7RTU4 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
BHLHA9Q7RTU4 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
BHLHA9Q7RTU4 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
BHLHA9Q7RTU4 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
BHLHA9Q7RTU4 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC20.91■□□□□ 0.94
BHLHA9Q7RTU4 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
BHLHA9Q7RTU4 HLA-G-202ENST00000376815 851 ntBASIC20.91■□□□□ 0.94
BHLHA9Q7RTU4 HLA-G-203ENST00000376818 1127 ntBASIC20.91■□□□□ 0.94
BHLHA9Q7RTU4 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
BHLHA9Q7RTU4 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC20.91■□□□□ 0.94
BHLHA9Q7RTU4 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
BHLHA9Q7RTU4 RPS2P52-201ENST00000469610 820 ntBASIC20.91■□□□□ 0.94
BHLHA9Q7RTU4 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC20.91■□□□□ 0.94
BHLHA9Q7RTU4 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
BHLHA9Q7RTU4 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC20.91■□□□□ 0.94
BHLHA9Q7RTU4 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC20.91■□□□□ 0.94
BHLHA9Q7RTU4 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
BHLHA9Q7RTU4 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
BHLHA9Q7RTU4 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
BHLHA9Q7RTU4 BX119927.1-201ENST00000636596 1552 ntBASIC20.91■□□□□ 0.94
BHLHA9Q7RTU4 TMEM191A-211ENST00000637163 1067 ntBASIC20.91■□□□□ 0.94
BHLHA9Q7RTU4 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.9■□□□□ 0.94
BHLHA9Q7RTU4 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC20.9■□□□□ 0.94
BHLHA9Q7RTU4 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
BHLHA9Q7RTU4 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC20.9■□□□□ 0.94
BHLHA9Q7RTU4 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
BHLHA9Q7RTU4 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
BHLHA9Q7RTU4 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
BHLHA9Q7RTU4 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
BHLHA9Q7RTU4 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
BHLHA9Q7RTU4 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
BHLHA9Q7RTU4 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
BHLHA9Q7RTU4 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
BHLHA9Q7RTU4 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
BHLHA9Q7RTU4 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC20.9■□□□□ 0.94
BHLHA9Q7RTU4 MMD2-204ENST00000612910 778 ntTSL 5 BASIC20.9■□□□□ 0.94
BHLHA9Q7RTU4 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
BHLHA9Q7RTU4 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
BHLHA9Q7RTU4 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
BHLHA9Q7RTU4 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
BHLHA9Q7RTU4 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
BHLHA9Q7RTU4 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
BHLHA9Q7RTU4 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC20.89■□□□□ 0.94
BHLHA9Q7RTU4 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
BHLHA9Q7RTU4 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
BHLHA9Q7RTU4 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
BHLHA9Q7RTU4 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC20.89■□□□□ 0.93
BHLHA9Q7RTU4 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
BHLHA9Q7RTU4 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.89■□□□□ 0.93
BHLHA9Q7RTU4 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
BHLHA9Q7RTU4 KRT18P29-201ENST00000397031 1267 ntBASIC20.89■□□□□ 0.93
BHLHA9Q7RTU4 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC20.89■□□□□ 0.93
BHLHA9Q7RTU4 THEM4-205ENST00000489410 643 ntTSL 2 BASIC20.89■□□□□ 0.93
BHLHA9Q7RTU4 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC20.89■□□□□ 0.93
BHLHA9Q7RTU4 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC20.89■□□□□ 0.93
BHLHA9Q7RTU4 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
BHLHA9Q7RTU4 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
BHLHA9Q7RTU4 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
BHLHA9Q7RTU4 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
BHLHA9Q7RTU4 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC20.89■□□□□ 0.93
BHLHA9Q7RTU4 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC20.89■□□□□ 0.93
BHLHA9Q7RTU4 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
BHLHA9Q7RTU4 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
BHLHA9Q7RTU4 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
BHLHA9Q7RTU4 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20.88■□□□□ 0.93
BHLHA9Q7RTU4 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
BHLHA9Q7RTU4 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC20.88■□□□□ 0.93
BHLHA9Q7RTU4 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
BHLHA9Q7RTU4 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
BHLHA9Q7RTU4 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
BHLHA9Q7RTU4 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
BHLHA9Q7RTU4 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC20.88■□□□□ 0.93
BHLHA9Q7RTU4 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
BHLHA9Q7RTU4 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC20.88■□□□□ 0.93
BHLHA9Q7RTU4 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
BHLHA9Q7RTU4 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC20.88■□□□□ 0.93
BHLHA9Q7RTU4 MTDHP1-201ENST00000605323 784 ntBASIC20.88■□□□□ 0.93
BHLHA9Q7RTU4 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
BHLHA9Q7RTU4 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
BHLHA9Q7RTU4 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
BHLHA9Q7RTU4 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC20.88■□□□□ 0.93
BHLHA9Q7RTU4 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC20.88■□□□□ 0.93
BHLHA9Q7RTU4 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms