RNA–Protein interactions for RNA: ENST00000458671.6

RTBDN-203, Transcript of retbindin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RTBDN, Length 1,066 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTBDN-203ENST00000458671 NISCHQ9Y2I1 1504 aa49.76■■■■■ 5.56
RTBDN-203ENST00000458671 CCDC180Q9P1Z9 1646 aa44.64■■■■■ 4.74
RTBDN-203ENST00000458671 ABCC9O60706 1549 aa44.29■■■■■ 4.68
RTBDN-203ENST00000458671 RB1CC1Q8TDY2 1594 aa42.32■■■■■ 4.37
RTBDN-203ENST00000458671 NACADO15069 1562 aa42.07■■■■■ 4.33
RTBDN-203ENST00000458671 DCAF8L2P0C7V8 631 aa41.84■■■■■ 4.29
RTBDN-203ENST00000458671 MYO15BQ96JP2 1530 aa41.56■■■■■ 4.24
RTBDN-203ENST00000458671 UNC13AQ9UPW8 1703 aa41.46■■■■■ 4.23
RTBDN-203ENST00000458671 ZCCHC6Q5VYS8 1495 aaKnown RBP41.32■■■■■ 4.2
RTBDN-203ENST00000458671 PABPN1Q86U42 306 aaKnown RBP eCLIP41.22■■■■■ 4.19
RTBDN-203ENST00000458671 DNAJC5BQ9UF47 199 aa41.22■■■■■ 4.19
RTBDN-203ENST00000458671 DCAF1Q9Y4B6 1507 aa41.13■■■■■ 4.18
RTBDN-203ENST00000458671 BICRAQ9NZM4 1560 aa41.05■■■■■ 4.16
RTBDN-203ENST00000458671 SCRIBQ14160 1630 aa40.66■■■■■ 4.1
RTBDN-203ENST00000458671 SHROOM4Q9ULL8 1493 aa40.54■■■■■ 4.08
RTBDN-203ENST00000458671 CC2D2AQ9P2K1 1620 aa40.07■■■■■ 4.01
RTBDN-203ENST00000458671 EIF4G1Q04637 1599 aaKnown RBP40.04■■■■■ 4
RTBDN-203ENST00000458671 CECR2Q9BXF3 1484 aa39.87■■■■□ 3.97
RTBDN-203ENST00000458671 SMARCA4P51532 1647 aa38.81■■■■□ 3.8
RTBDN-203ENST00000458671 NCAPD3P42695 1498 aa38.79■■■■□ 3.8
RTBDN-203ENST00000458671 ATAD2BQ9ULI0 1458 aa38.73■■■■□ 3.79
RTBDN-203ENST00000458671 SMARCA2P51531 1590 aa38.67■■■■□ 3.78
RTBDN-203ENST00000458671 BAZ1AQ9NRL2 1556 aaPredicted RBP38.65■■■■□ 3.78
RTBDN-203ENST00000458671 HMGXB3Q12766 1538 aa38.58■■■■□ 3.77
RTBDN-203ENST00000458671 PEG3Q9GZU2 1588 aa38.42■■■■□ 3.74
RTBDN-203ENST00000458671 BAZ1BQ9UIG0 1483 aaKnown RBP38.4■■■■□ 3.74
RTBDN-203ENST00000458671 MROH2BQ7Z745 1585 aa38.35■■■■□ 3.73
RTBDN-203ENST00000458671 ERCC6Q03468 1493 aa38.24■■■■□ 3.71
RTBDN-203ENST00000458671 NESP48681 1621 aa38.12■■■■□ 3.69
RTBDN-203ENST00000458671 CUX2O14529 1486 aa38.08■■■■□ 3.69
RTBDN-203ENST00000458671 WIZO95785 1651 aa37.95■■■■□ 3.67
RTBDN-203ENST00000458671 LAMC3Q9Y6N6 1575 aa37.94■■■■□ 3.66
RTBDN-203ENST00000458671 THOC2Q8NI27 1593 aaKnown RBP37.75■■■■□ 3.63
RTBDN-203ENST00000458671 KIF21AQ7Z4S6 1674 aa37.74■■■■□ 3.63
RTBDN-203ENST00000458671 DNAJC5Q9H3Z4 198 aa37.68■■■■□ 3.62
RTBDN-203ENST00000458671 PDS5BQ9NTI5 1447 aa37.67■■■■□ 3.62
RTBDN-203ENST00000458671 CADPSQ9ULU8 1353 aa37.62■■■■□ 3.61
RTBDN-203ENST00000458671 RSF1Q96T23 1441 aaPredicted RBP37.61■■■■□ 3.61
RTBDN-203ENST00000458671 TOP2AP11388 1531 aaKnown RBP37.47■■■■□ 3.59
RTBDN-203ENST00000458671 MRC2Q9UBG0 1479 aa37.34■■■■□ 3.57
RTBDN-203ENST00000458671 CFTRP13569 1480 aa37.26■■■■□ 3.56
RTBDN-203ENST00000458671 WDR62O43379 1518 aa37.26■■■■□ 3.56
RTBDN-203ENST00000458671 CEP164Q9UPV0 1460 aa37.26■■■■□ 3.55
RTBDN-203ENST00000458671 FANCD2Q9BXW9 1451 aa37.22■■■■□ 3.55
RTBDN-203ENST00000458671 PRDM2Q13029 1718 aa37.08■■■■□ 3.53
RTBDN-203ENST00000458671 CCDC88BA6NC98 1476 aa37.01■■■■□ 3.51
RTBDN-203ENST00000458671 URB2Q14146 1524 aaKnown RBP36.9■■■■□ 3.5
RTBDN-203ENST00000458671 TOPBP1Q92547 1522 aa36.55■■■■□ 3.44
RTBDN-203ENST00000458671 ABCC8Q09428 1581 aa36.5■■■■□ 3.43
RTBDN-203ENST00000458671 IFT140Q96RY7 1462 aa36.5■■■■□ 3.43
RTBDN-203ENST00000458671 DNMBPQ6XZF7 1577 aa36.48■■■■□ 3.43
RTBDN-203ENST00000458671 ZNF608Q9ULD9 1512 aaPredicted RBP36.39■■■■□ 3.42
RTBDN-203ENST00000458671 OSCARQ8IYS5 282 aa36.33■■■■□ 3.41
RTBDN-203ENST00000458671 EIF4G3O43432 1585 aaKnown RBP36.28■■■■□ 3.4
RTBDN-203ENST00000458671 TARBP1Q13395 1621 aaKnown RBP36.24■■■■□ 3.39
RTBDN-203ENST00000458671 POLA1P09884 1462 aaPredicted RBP36.2■■■■□ 3.39
RTBDN-203ENST00000458671 TRIM41Q8WV44 630 aa36.17■■■■□ 3.38
RTBDN-203ENST00000458671 SUPT5HO00267 1087 aaKnown RBP36.14■■■■□ 3.38
RTBDN-203ENST00000458671 AQRO60306 1485 aaKnown RBP eCLIP36.08■■■■□ 3.37
RTBDN-203ENST00000458671 RAD54L2Q9Y4B4 1467 aa36.05■■■■□ 3.36
RTBDN-203ENST00000458671 CUX1P39880 1505 aa36.02■■■■□ 3.36
RTBDN-203ENST00000458671 FGD5Q6ZNL6 1462 aa36.01■■■■□ 3.36
RTBDN-203ENST00000458671 SOGA1O94964 1423 aa36■■■■□ 3.35
RTBDN-203ENST00000458671 CHD1O14646 1710 aa36■■■■□ 3.35
RTBDN-203ENST00000458671 RIMBP3CA6NJZ7 1639 aa35.93■■■■□ 3.34
RTBDN-203ENST00000458671 RIMBP3BA6NNM3 1639 aa35.93■■■■□ 3.34
RTBDN-203ENST00000458671 RIMBP3Q9UFD9 1639 aa35.93■■■■□ 3.34
RTBDN-203ENST00000458671 WDR97A6NE52 1622 aa35.92■■■■□ 3.34
RTBDN-203ENST00000458671 TDRD9Q8NDG6 1382 aaKnown RBP35.89■■■■□ 3.34
RTBDN-203ENST00000458671 ARHGEF11O15085 1522 aa35.81■■■■□ 3.32
RTBDN-203ENST00000458671 FBLN2P98095 1184 aa35.79■■■■□ 3.32
RTBDN-203ENST00000458671 SNAPC4Q5SXM2 1469 aa35.76■■■■□ 3.32
RTBDN-203ENST00000458671 GRIN2BQ13224 1484 aa35.69■■■■□ 3.3
RTBDN-203ENST00000458671 PBRM1Q86U86 1689 aa35.68■■■■□ 3.3
RTBDN-203ENST00000458671 MAGI1Q96QZ7 1491 aaPredicted RBP35.67■■■■□ 3.3
RTBDN-203ENST00000458671 ABCA10Q8WWZ4 1543 aa35.62■■■■□ 3.29
RTBDN-203ENST00000458671 GAPVD1Q14C86 1478 aa35.6■■■■□ 3.29
RTBDN-203ENST00000458671 ABCA5Q8WWZ7 1642 aa35.59■■■■□ 3.29
RTBDN-203ENST00000458671 BIVM-ERCC5R4GMW8 1640 aa35.58■■■■□ 3.29
RTBDN-203ENST00000458671 CHMP7Q8WUX9 453 aaPredicted RBP35.57■■■■□ 3.28
RTBDN-203ENST00000458671 SYNJ1O43426 1573 aa35.55■■■■□ 3.28
RTBDN-203ENST00000458671 TOP2BQ02880 1626 aa35.55■■■■□ 3.28
RTBDN-203ENST00000458671 SYNJ2O15056 1496 aa35.54■■■■□ 3.28
RTBDN-203ENST00000458671 CLASP1Q7Z460 1538 aa35.52■■■■□ 3.28
RTBDN-203ENST00000458671 WRNQ14191 1432 aaPredicted RBP eCLIP35.51■■■■□ 3.28
RTBDN-203ENST00000458671 CYB5RLQ6IPT4 315 aa35.46■■■■□ 3.27
RTBDN-203ENST00000458671 ARAP1Q96P48 1450 aa35.46■■■■□ 3.27
RTBDN-203ENST00000458671 ADAMTS12P58397 1594 aa35.3■■■■□ 3.24
RTBDN-203ENST00000458671 GRIN2AQ12879 1464 aa35.24■■■■□ 3.23
RTBDN-203ENST00000458671 ERICH3Q5RHP9 1530 aa35.19■■■■□ 3.22
RTBDN-203ENST00000458671 FHAD1B1AJZ9 1412 aa35.15■■■■□ 3.22
RTBDN-203ENST00000458671 CEP170Q5SW79 1584 aa35.13■■■■□ 3.21
RTBDN-203ENST00000458671 NUP160Q12769 1436 aa35.09■■■■□ 3.21
RTBDN-203ENST00000458671 TRHP20396 242 aaPredicted RBP35■■■■□ 3.19
RTBDN-203ENST00000458671 ERCC6L2Q5T890 1561 aa34.97■■■■□ 3.19
RTBDN-203ENST00000458671 SHROOM2Q13796 1616 aa34.97■■■■□ 3.19
RTBDN-203ENST00000458671 KIF27Q86VH2 1401 aa34.81■■■■□ 3.16
RTBDN-203ENST00000458671 RUSC2Q8N2Y8 1516 aa34.8■■■■□ 3.16
RTBDN-203ENST00000458671 CUL7Q14999 1698 aa34.79■■■■□ 3.16
RTBDN-203ENST00000458671 PRG4Q92954 1404 aaPredicted RBP34.73■■■■□ 3.15
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms