Protein–RNA interactions for Protein: Q12200

NCR1, NPC intracellular cholesterol transporter 1-related protein 1, yeastyeast

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NCR1Q12200 PAU18YLL064C 363 nt3.48□□□□□ -1.85
NCR1Q12200 PAU6YNR076W 363 nt3.48□□□□□ -1.85
NCR1Q12200 PAU20YOL161C 363 nt3.48□□□□□ -1.85
NCR1Q12200 XRN1YGL173C 4587 nt3.48□□□□□ -1.85
NCR1Q12200 PNC1YGL037C 651 nt3.47□□□□□ -1.85
NCR1Q12200 CHO2YGR157W 2610 nt3.47□□□□□ -1.85
NCR1Q12200 EPL1YFL024C 2499 nt3.47□□□□□ -1.85
NCR1Q12200 DGR2YKL121W 2559 nt3.47□□□□□ -1.85
NCR1Q12200 BOI1YBL085W 2943 nt3.47□□□□□ -1.85
NCR1Q12200 RRP5YMR229C 5190 nt3.46□□□□□ -1.85
NCR1Q12200 RPL37BYDR500C 267 nt3.46□□□□□ -1.86
NCR1Q12200 YGR146C-AYGR146C-A 162 nt3.46□□□□□ -1.86
NCR1Q12200 STU1YBL034C 4542 nt3.46□□□□□ -1.86
NCR1Q12200 ZDS2YML109W 2829 nt3.46□□□□□ -1.86
NCR1Q12200 CHS2YBR038W 2892 nt3.45□□□□□ -1.86
NCR1Q12200 SSM4YIL030C 3960 nt3.45□□□□□ -1.86
NCR1Q12200 RRP12YPL012W 3687 nt3.45□□□□□ -1.86
NCR1Q12200 STU2YLR045C 2667 nt3.45□□□□□ -1.86
NCR1Q12200 UBP15YMR304W 3693 nt3.45□□□□□ -1.86
NCR1Q12200 YJR039WYJR039W 3366 nt3.44□□□□□ -1.86
NCR1Q12200 VBA4YDR119W 2307 nt3.44□□□□□ -1.86
NCR1Q12200 STB4YMR019W 2850 nt3.43□□□□□ -1.86
NCR1Q12200 TOP1YOL006C 2310 nt3.43□□□□□ -1.86
NCR1Q12200 DAN4YJR151C 3486 nt3.43□□□□□ -1.86
NCR1Q12200 SAP190YKR028W 3102 nt3.42□□□□□ -1.86
NCR1Q12200 RAD5YLR032W 3510 nt3.42□□□□□ -1.86
NCR1Q12200 ENV11YGR071C 2583 nt3.42□□□□□ -1.86
NCR1Q12200 SUL1YBR294W 2580 nt3.42□□□□□ -1.86
NCR1Q12200 BRE1YDL074C 2103 nt3.41□□□□□ -1.86
NCR1Q12200 MNL2YLR057W 2550 nt3.41□□□□□ -1.86
NCR1Q12200 SYT1YPR095C 3681 nt3.41□□□□□ -1.86
NCR1Q12200 SAS3YBL052C 2496 nt3.41□□□□□ -1.86
NCR1Q12200 FLO9YAL063C 3969 nt3.41□□□□□ -1.86
NCR1Q12200 YDR210W-BYDR210W-B 5313 nt3.41□□□□□ -1.86
NCR1Q12200 YDR261W-BYDR261W-B 5313 nt3.41□□□□□ -1.86
NCR1Q12200 YFL002W-AYFL002W-A 5313 nt3.41□□□□□ -1.86
NCR1Q12200 YGR161W-BYGR161W-B 5313 nt3.41□□□□□ -1.86
NCR1Q12200 YLR410W-BYLR410W-B 5313 nt3.41□□□□□ -1.86
NCR1Q12200 YCL019WYCL019W 5313 nt3.41□□□□□ -1.86
NCR1Q12200 COG4YPR105C 2586 nt3.41□□□□□ -1.86
NCR1Q12200 YPR022CYPR022C 3402 nt3.4□□□□□ -1.86
NCR1Q12200 YGL123C-AYGL123C-A 231 nt3.4□□□□□ -1.87
NCR1Q12200 YMR317WYMR317W 3423 nt3.4□□□□□ -1.87
NCR1Q12200 SPA2YLL021W 4401 nt3.39□□□□□ -1.87
NCR1Q12200 HRD3YLR207W 2502 nt3.39□□□□□ -1.87
NCR1Q12200 tQ(UUG)BtQ(UUG)B 72 nt3.39□□□□□ -1.87
NCR1Q12200 MBB1YJL199C 327 nt3.39□□□□□ -1.87
NCR1Q12200 PHO91YNR013C 2685 nt3.39□□□□□ -1.87
NCR1Q12200 SMC3YJL074C 3693 nt3.38□□□□□ -1.87
NCR1Q12200 KSP1YHR082C 3090 nt3.38□□□□□ -1.87
NCR1Q12200 AUS1YOR011W 4185 nt3.38□□□□□ -1.87
NCR1Q12200 VPS3YDR495C 3036 nt3.37□□□□□ -1.87
NCR1Q12200 AFI1YOR129C 2682 nt3.37□□□□□ -1.87
NCR1Q12200 UBP3YER151C 2739 nt3.37□□□□□ -1.87
NCR1Q12200 RTT10YPL183C 3042 nt3.37□□□□□ -1.87
NCR1Q12200 KAP123YER110C 3342 nt3.36□□□□□ -1.87
NCR1Q12200 SPO22YIL073C 2928 nt3.36□□□□□ -1.87
NCR1Q12200 YGR109W-BYGR109W-B 4644 nt3.35□□□□□ -1.87
NCR1Q12200 RPS21AYKR057W 264 nt3.35□□□□□ -1.87
NCR1Q12200 STT4YLR305C 5703 nt3.35□□□□□ -1.87
NCR1Q12200 ZRG8YER033C 3231 nt3.34□□□□□ -1.87
NCR1Q12200 YGR122C-AYGR122C-A 129 nt3.34□□□□□ -1.87
NCR1Q12200 RPN1YHR027C 2982 nt3.34□□□□□ -1.87
NCR1Q12200 YHR080CYHR080C 4038 nt3.33□□□□□ -1.88
NCR1Q12200 RPS22AYJL190C 393 nt3.33□□□□□ -1.88
NCR1Q12200 YEL025CYEL025C 3567 nt3.33□□□□□ -1.88
NCR1Q12200 RPA190YOR341W 4995 nt3.32□□□□□ -1.88
NCR1Q12200 UFD2YDL190C 2886 nt3.32□□□□□ -1.88
NCR1Q12200 RTP1YMR185W 2946 nt3.32□□□□□ -1.88
NCR1Q12200 SKI7YOR076C 2244 nt3.31□□□□□ -1.88
NCR1Q12200 YOR161W-AYOR161W-A 81 nt3.31□□□□□ -1.88
NCR1Q12200 IST2YBR086C 2841 nt3.31□□□□□ -1.88
NCR1Q12200 MMS1YPR164W 4224 nt3.31□□□□□ -1.88
NCR1Q12200 NET1YJL076W 3570 nt3.31□□□□□ -1.88
NCR1Q12200 STE23YLR389C 3084 nt3.3□□□□□ -1.88
NCR1Q12200 TAE2YPL009C 3117 nt3.3□□□□□ -1.88
NCR1Q12200 YKL100W-AYKL100W-A 90 nt3.3□□□□□ -1.88
NCR1Q12200 NFT1YKR103W 3657 nt3.3□□□□□ -1.88
NCR1Q12200 RPS29AYLR388W 171 nt3.29□□□□□ -1.88
NCR1Q12200 FAS1YKL182W 6156 nt3.29□□□□□ -1.88
NCR1Q12200 MYO5YMR109W 3660 nt3.29□□□□□ -1.88
NCR1Q12200 PKH2YOL100W 3246 nt3.29□□□□□ -1.88
NCR1Q12200 PRP6YBR055C 2700 nt3.28□□□□□ -1.89
NCR1Q12200 NMD2YHR077C 3270 nt3.27□□□□□ -1.89
NCR1Q12200 TIM9YEL020W-A 264 nt3.27□□□□□ -1.89
NCR1Q12200 SAP185YJL098W 3177 nt3.27□□□□□ -1.89
NCR1Q12200 SIZ1YDR409W 2715 nt3.27□□□□□ -1.89
NCR1Q12200 MET6YER091C 2304 nt3.26□□□□□ -1.89
NCR1Q12200 TBS1YBR150C 3285 nt3.26□□□□□ -1.89
NCR1Q12200 NOP14YDL148C 2433 nt3.26□□□□□ -1.89
NCR1Q12200 SEC10YLR166C 2616 nt3.26□□□□□ -1.89
NCR1Q12200 GCN1YGL195W 8019 nt3.26□□□□□ -1.89
NCR1Q12200 YIL082W-AYIL082W-A 4497 nt3.25□□□□□ -1.89
NCR1Q12200 RGC1YPR115W 3252 nt3.25□□□□□ -1.89
NCR1Q12200 RPM2YML091C 3609 nt3.24□□□□□ -1.89
NCR1Q12200 VMR1YHL035C 4779 nt3.24□□□□□ -1.89
NCR1Q12200 SMC2YFR031C 3513 nt3.24□□□□□ -1.89
NCR1Q12200 MGA2YIR033W 3342 nt3.24□□□□□ -1.89
NCR1Q12200 EMC5YIL027C 426 nt3.22□□□□□ -1.89
NCR1Q12200 YOR394C-AYOR394C-A 168 nt3.22□□□□□ -1.89
Retrieved 100 of 7,029 protein–RNA pairs in 27.7 ms