Protein–RNA interactions for Protein: Q04437

YKU80, ATP-dependent DNA helicase II subunit 2, yeastyeast

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YKU80Q04437 PCC1YKR095W-A 267 nt1.64□□□□□ -2.15
YKU80Q04437 YNL146WYNL146W 303 nt1.64□□□□□ -2.15
YKU80Q04437 YOR108C-AYOR108C-A 210 nt1.64□□□□□ -2.15
YKU80Q04437 TIM18YOR297C 579 nt1.64□□□□□ -2.15
YKU80Q04437 YOR376WYOR376W 369 nt1.64□□□□□ -2.15
YKU80Q04437 SBE22YHR103W 2559 nt1.64□□□□□ -2.15
YKU80Q04437 COF1YLL050C 432 nt1.63□□□□□ -2.15
YKU80Q04437 UFD2YDL190C 2886 nt1.63□□□□□ -2.15
YKU80Q04437 NHP2YDL208W 471 nt1.62□□□□□ -2.15
YKU80Q04437 YDR413CYDR413C 576 nt1.62□□□□□ -2.15
YKU80Q04437 YJL022WYJL022W 309 nt1.62□□□□□ -2.15
YKU80Q04437 YJL135WYJL135W 318 nt1.62□□□□□ -2.15
YKU80Q04437 YKL118WYKL118W 312 nt1.62□□□□□ -2.15
YKU80Q04437 FIG2YCR089W 4830 nt1.62□□□□□ -2.15
YKU80Q04437 CHS1YNL192W 3396 nt1.62□□□□□ -2.15
YKU80Q04437 snR72snR72 98 nt1.61□□□□□ -2.15
YKU80Q04437 RPL38YLR325C 237 nt1.61□□□□□ -2.15
YKU80Q04437 YMR242W-AYMR242W-A 90 nt1.61□□□□□ -2.15
YKU80Q04437 YNL277W-AYNL277W-A 189 nt1.61□□□□□ -2.15
YKU80Q04437 YPR002C-AYPR002C-A 198 nt1.61□□□□□ -2.15
YKU80Q04437 PET127YOR017W 2403 nt1.61□□□□□ -2.15
YKU80Q04437 ALK1YGL021W 2283 nt1.61□□□□□ -2.15
YKU80Q04437 AIM44YPL158C 2277 nt1.61□□□□□ -2.15
YKU80Q04437 KIP1YBL063W 3336 nt1.61□□□□□ -2.15
YKU80Q04437 YCS4YLR272C 3531 nt1.61□□□□□ -2.15
YKU80Q04437 tQ(UUG)E2tQ(UUG)E2 72 nt1.6□□□□□ -2.15
YKU80Q04437 VPS55YJR044C 423 nt1.6□□□□□ -2.15
YKU80Q04437 YOR199WYOR199W 330 nt1.6□□□□□ -2.15
YKU80Q04437 snR36snR36 182 nt1.6□□□□□ -2.15
YKU80Q04437 KAP122YGL016W 3246 nt1.6□□□□□ -2.15
YKU80Q04437 ATG11YPR049C 3537 nt1.6□□□□□ -2.15
YKU80Q04437 SCW11YGL028C 1629 nt1.59□□□□□ -2.15
YKU80Q04437 YMR175W-AYMR175W-A 195 nt1.59□□□□□ -2.15
YKU80Q04437 APL2YKL135C 2181 nt1.59□□□□□ -2.16
YKU80Q04437 SLX4YLR135W 2247 nt1.59□□□□□ -2.16
YKU80Q04437 VPS54YDR027C 2670 nt1.58□□□□□ -2.16
YKU80Q04437 NPC2YDL046W 522 nt1.58□□□□□ -2.16
YKU80Q04437 YFL032WYFL032W 321 nt1.58□□□□□ -2.16
YKU80Q04437 YGL217CYGL217C 342 nt1.58□□□□□ -2.16
YKU80Q04437 YLR419WYLR419W 4308 nt1.58□□□□□ -2.16
YKU80Q04437 YDR102CYDR102C 333 nt1.57□□□□□ -2.16
YKU80Q04437 CSN9YDR179C 489 nt1.57□□□□□ -2.16
YKU80Q04437 HTB2YBL002W 396 nt1.57□□□□□ -2.16
YKU80Q04437 YML099W-AYML099W-A 330 nt1.57□□□□□ -2.16
YKU80Q04437 YMR031W-AYMR031W-A 327 nt1.57□□□□□ -2.16
YKU80Q04437 YOL160WYOL160W 342 nt1.57□□□□□ -2.16
YKU80Q04437 FYV8YGR196C 2454 nt1.57□□□□□ -2.16
YKU80Q04437 YDR182W-AYDR182W-A 204 nt1.56□□□□□ -2.16
YKU80Q04437 YJL015CYJL015C 285 nt1.56□□□□□ -2.16
YKU80Q04437 YMR290W-AYMR290W-A 348 nt1.56□□□□□ -2.16
YKU80Q04437 YOR161W-BYOR161W-B 261 nt1.56□□□□□ -2.16
YKU80Q04437 EST2YLR318W 2655 nt1.56□□□□□ -2.16
YKU80Q04437 SPC110YDR356W 2835 nt1.56□□□□□ -2.16
YKU80Q04437 CLU1YMR012W 3834 nt1.56□□□□□ -2.16
YKU80Q04437 POL5YEL055C 3069 nt1.55□□□□□ -2.16
YKU80Q04437 SSK2YNR031C 4740 nt1.55□□□□□ -2.16
YKU80Q04437 PIK1YNL267W 3201 nt1.55□□□□□ -2.16
YKU80Q04437 CCH1YGR217W 6120 nt1.54□□□□□ -2.16
YKU80Q04437 MAD1YGL086W 2250 nt1.54□□□□□ -2.16
YKU80Q04437 RPL35AYDL191W 363 nt1.54□□□□□ -2.16
YKU80Q04437 YER097WYER097W 330 nt1.54□□□□□ -2.16
YKU80Q04437 AZF1YOR113W 2745 nt1.54□□□□□ -2.16
YKU80Q04437 BRR2YER172C 6492 nt1.54□□□□□ -2.16
YKU80Q04437 MSN5YDR335W 3675 nt1.54□□□□□ -2.16
YKU80Q04437 SLI15YBR156C 2097 nt1.54□□□□□ -2.16
YKU80Q04437 NUT1YGL151W 3399 nt1.53□□□□□ -2.16
YKU80Q04437 PMD1YER132C 5262 nt1.53□□□□□ -2.16
YKU80Q04437 ENV11YGR071C 2583 nt1.53□□□□□ -2.17
YKU80Q04437 MAM33YIL070C 801 nt1.52□□□□□ -2.17
YKU80Q04437 YAR029WYAR029W 225 nt1.52□□□□□ -2.17
YKU80Q04437 MPT5YGL178W 2580 nt1.51□□□□□ -2.17
YKU80Q04437 YDR048CYDR048C 315 nt1.51□□□□□ -2.17
YKU80Q04437 CUL3YGR003W 2235 nt1.51□□□□□ -2.17
YKU80Q04437 YER181CYER181C 324 nt1.5□□□□□ -2.17
YKU80Q04437 PKH2YOL100W 3246 nt1.49□□□□□ -2.17
YKU80Q04437 HKR1YDR420W 5409 nt1.49□□□□□ -2.17
YKU80Q04437 YDL211CYDL211C 1119 nt1.49□□□□□ -2.17
YKU80Q04437 COA6YMR244C-A 315 nt1.49□□□□□ -2.17
YKU80Q04437 LCD1YDR499W 2244 nt1.48□□□□□ -2.17
YKU80Q04437 RAD34YDR314C 2079 nt1.48□□□□□ -2.17
YKU80Q04437 SEC21YNL287W 2808 nt1.48□□□□□ -2.17
YKU80Q04437 YDR169C-AYDR169C-A 150 nt1.48□□□□□ -2.17
YKU80Q04437 YHR007C-AYHR007C-A 216 nt1.48□□□□□ -2.17
YKU80Q04437 COG4YPR105C 2586 nt1.48□□□□□ -2.17
YKU80Q04437 YGR109W-BYGR109W-B 4644 nt1.47□□□□□ -2.17
YKU80Q04437 TRM3YDL112W 4311 nt1.47□□□□□ -2.17
YKU80Q04437 STE5YDR103W 2754 nt1.47□□□□□ -2.17
YKU80Q04437 YGL149WYGL149W 306 nt1.47□□□□□ -2.17
YKU80Q04437 YIR044CYIR044C 186 nt1.47□□□□□ -2.17
YKU80Q04437 RPL39YJL189W 156 nt1.47□□□□□ -2.17
YKU80Q04437 TAR1YLR154W-C 375 nt1.47□□□□□ -2.17
YKU80Q04437 PIP2YOR363C 2991 nt1.47□□□□□ -2.17
YKU80Q04437 SMC1YFL008W 3678 nt1.46□□□□□ -2.18
YKU80Q04437 SEC3YER008C 4011 nt1.46□□□□□ -2.18
YKU80Q04437 SPT21YMR179W 2277 nt1.46□□□□□ -2.18
YKU80Q04437 CAT8YMR280C 4302 nt1.46□□□□□ -2.18
YKU80Q04437 FIG4YNL325C 2640 nt1.46□□□□□ -2.18
YKU80Q04437 YLR255CYLR255C 354 nt1.46□□□□□ -2.18
YKU80Q04437 MMS4YBR098W 2076 nt1.46□□□□□ -2.18
YKU80Q04437 YCR022CYCR022C 345 nt1.45□□□□□ -2.18
Retrieved 100 of 7,029 protein–RNA pairs in 44 ms