Protein–RNA interactions for Protein: P38959

VPS41, Vacuolar protein sorting-associated protein 41, yeastyeast

Predictions only

Length 992 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS41P38959 PKH3YDR466W 2697 nt1.91□□□□□ -2.1
VPS41P38959 YHR210CYHR210C 1026 nt1.91□□□□□ -2.1
VPS41P38959 BLI1YKL061W 342 nt1.91□□□□□ -2.1
VPS41P38959 PAU18YLL064C 363 nt1.91□□□□□ -2.1
VPS41P38959 CYB5YNL111C 363 nt1.91□□□□□ -2.1
VPS41P38959 PAU6YNR076W 363 nt1.91□□□□□ -2.1
VPS41P38959 YBR064WYBR064W 429 nt1.91□□□□□ -2.1
VPS41P38959 MEC1YBR136W 7107 nt1.91□□□□□ -2.1
VPS41P38959 SCW11YGL028C 1629 nt1.91□□□□□ -2.1
VPS41P38959 UBP1YDL122W 2430 nt1.9□□□□□ -2.1
VPS41P38959 PEP1YBL017C 4740 nt1.9□□□□□ -2.1
VPS41P38959 MMS22YLR320W 4365 nt1.9□□□□□ -2.11
VPS41P38959 snR72snR72 98 nt1.9□□□□□ -2.11
VPS41P38959 YNL337WYNL337W 255 nt1.9□□□□□ -2.11
VPS41P38959 LYS14YDR034C 2373 nt1.9□□□□□ -2.11
VPS41P38959 snR55snR55 98 nt1.89□□□□□ -2.11
VPS41P38959 YNL028WYNL028W 318 nt1.89□□□□□ -2.11
VPS41P38959 PLC1YPL268W 2610 nt1.89□□□□□ -2.11
VPS41P38959 VPS15YBR097W 4365 nt1.88□□□□□ -2.11
VPS41P38959 SAC3YDR159W 3906 nt1.88□□□□□ -2.11
VPS41P38959 YCR087C-AYCR087C-A 462 nt1.88□□□□□ -2.11
VPS41P38959 SSS1YDR086C 243 nt1.88□□□□□ -2.11
VPS41P38959 YDR406W-AYDR406W-A 246 nt1.88□□□□□ -2.11
VPS41P38959 GYP5YPL249C 2685 nt1.88□□□□□ -2.11
VPS41P38959 SPT21YMR179W 2277 nt1.88□□□□□ -2.11
VPS41P38959 ZIP1YDR285W 2628 nt1.87□□□□□ -2.11
VPS41P38959 VIK1YPL253C 1944 nt1.87□□□□□ -2.11
VPS41P38959 IRC20YLR247C 4671 nt1.87□□□□□ -2.11
VPS41P38959 YCR018C-AYCR018C-A 255 nt1.87□□□□□ -2.11
VPS41P38959 YMR046W-AYMR046W-A 129 nt1.87□□□□□ -2.11
VPS41P38959 CSE2YNR010W 450 nt1.87□□□□□ -2.11
VPS41P38959 LCD1YDR499W 2244 nt1.87□□□□□ -2.11
VPS41P38959 YMR307C-AYMR307C-A 195 nt1.86□□□□□ -2.11
VPS41P38959 ZRG17YNR039C 1818 nt1.86□□□□□ -2.11
VPS41P38959 IRR1YIL026C 3453 nt1.85□□□□□ -2.11
VPS41P38959 TDA9YML081W 3756 nt1.84□□□□□ -2.11
VPS41P38959 YDR003W-AYDR003W-A 123 nt1.84□□□□□ -2.11
VPS41P38959 YGL052WYGL052W 306 nt1.84□□□□□ -2.11
VPS41P38959 YJL197C-AYJL197C-A 282 nt1.84□□□□□ -2.11
VPS41P38959 YLR035C-AYLR035C-A 3468 nt1.84□□□□□ -2.12
VPS41P38959 YJR039WYJR039W 3366 nt1.84□□□□□ -2.12
VPS41P38959 YLL032CYLL032C 2478 nt1.83□□□□□ -2.12
VPS41P38959 SAS3YBL052C 2496 nt1.83□□□□□ -2.12
VPS41P38959 MAK10YEL053C 2202 nt1.83□□□□□ -2.12
VPS41P38959 IRE1YHR079C 3348 nt1.83□□□□□ -2.12
VPS41P38959 SRP14YDL092W 441 nt1.82□□□□□ -2.12
VPS41P38959 PAU2YEL049W 363 nt1.82□□□□□ -2.12
VPS41P38959 PFD1YJL179W 330 nt1.82□□□□□ -2.12
VPS41P38959 IES4YOR189W 351 nt1.82□□□□□ -2.12
VPS41P38959 SEC63YOR254C 1992 nt1.81□□□□□ -2.12
VPS41P38959 PDE2YOR360C 1581 nt1.81□□□□□ -2.12
VPS41P38959 YMR272W-BYMR272W-B 108 nt1.81□□□□□ -2.12
VPS41P38959 YMR321CYMR321C 318 nt1.81□□□□□ -2.12
VPS41P38959 MSH6YDR097C 3729 nt1.8□□□□□ -2.12
VPS41P38959 INA22YIR024C 651 nt1.8□□□□□ -2.12
VPS41P38959 YLR120W-AYLR120W-A 102 nt1.8□□□□□ -2.12
VPS41P38959 HMI1YOL095C 2121 nt1.8□□□□□ -2.12
VPS41P38959 DNF3YMR162C 4971 nt1.79□□□□□ -2.12
VPS41P38959 YOR019WYOR019W 2193 nt1.79□□□□□ -2.12
VPS41P38959 YMR172C-AYMR172C-A 384 nt1.79□□□□□ -2.12
VPS41P38959 YOR015WYOR015W 360 nt1.79□□□□□ -2.12
VPS41P38959 MSC6YOR354C 2079 nt1.79□□□□□ -2.12
VPS41P38959 FRK1YPL141C 2598 nt1.79□□□□□ -2.12
VPS41P38959 BPH1YCR032W 6504 nt1.79□□□□□ -2.12
VPS41P38959 NPR2YEL062W 1848 nt1.78□□□□□ -2.12
VPS41P38959 GPG1YGL121C 381 nt1.78□□□□□ -2.12
VPS41P38959 MDM20YOL076W 2391 nt1.78□□□□□ -2.12
VPS41P38959 ZIP2YGL249W 2115 nt1.78□□□□□ -2.13
VPS41P38959 CTR9YOL145C 3234 nt1.77□□□□□ -2.13
VPS41P38959 YMR230W-AYMR230W-A 189 nt1.77□□□□□ -2.13
VPS41P38959 YOR218CYOR218C 420 nt1.77□□□□□ -2.13
VPS41P38959 RLM1YPL089C 2031 nt1.76□□□□□ -2.13
VPS41P38959 YER088C-AYER088C-A 324 nt1.76□□□□□ -2.13
VPS41P38959 YMR242W-AYMR242W-A 90 nt1.76□□□□□ -2.13
VPS41P38959 YOL160WYOL160W 342 nt1.76□□□□□ -2.13
VPS41P38959 YBR174CYBR174C 315 nt1.76□□□□□ -2.13
VPS41P38959 MLH3YPL164C 2148 nt1.76□□□□□ -2.13
VPS41P38959 YCK3YER123W 1575 nt1.76□□□□□ -2.13
VPS41P38959 SEY1YOR165W 2331 nt1.75□□□□□ -2.13
VPS41P38959 MPT5YGL178W 2580 nt1.75□□□□□ -2.13
VPS41P38959 YOR108C-AYOR108C-A 210 nt1.75□□□□□ -2.13
VPS41P38959 YPR092WYPR092W 306 nt1.75□□□□□ -2.13
VPS41P38959 VPS54YDR027C 2670 nt1.75□□□□□ -2.13
VPS41P38959 SPC98YNL126W 2541 nt1.74□□□□□ -2.13
VPS41P38959 RPS27BYHR021C 249 nt1.74□□□□□ -2.13
VPS41P38959 APQ12YIL040W 417 nt1.74□□□□□ -2.13
VPS41P38959 YNL198CYNL198C 303 nt1.74□□□□□ -2.13
VPS41P38959 SPO24YPR036W-A 204 nt1.74□□□□□ -2.13
VPS41P38959 REV3YPL167C 4515 nt1.74□□□□□ -2.13
VPS41P38959 RPL34BYIL052C 366 nt1.73□□□□□ -2.13
VPS41P38959 YOR225WYOR225W 330 nt1.73□□□□□ -2.13
VPS41P38959 AI5_ALPHAQ0070 1893 nt1.73□□□□□ -2.13
VPS41P38959 tF(GAA)QtF(GAA)Q 75 nt1.72□□□□□ -2.13
VPS41P38959 YOR302WYOR302W 78 nt1.72□□□□□ -2.13
VPS41P38959 YCL023CYCL023C 348 nt1.72□□□□□ -2.13
VPS41P38959 ADR1YDR216W 3972 nt1.72□□□□□ -2.13
VPS41P38959 BRR2YER172C 6492 nt1.72□□□□□ -2.13
VPS41P38959 TBS1YBR150C 3285 nt1.72□□□□□ -2.13
VPS41P38959 SEC5YDR166C 2916 nt1.71□□□□□ -2.14
VPS41P38959 ISD11YER048W-A 285 nt1.71□□□□□ -2.14
Retrieved 100 of 7,029 protein–RNA pairs in 36.7 ms