Protein–RNA interactions for Protein: P32500

NDC1, Nucleoporin NDC1, yeastyeast

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NDC1P32500 PET309YLR067C 2898 nt1.66□□□□□ -2.14
NDC1P32500 MYO4YAL029C 4416 nt1.65□□□□□ -2.14
NDC1P32500 SRP14YDL092W 441 nt1.65□□□□□ -2.15
NDC1P32500 YMR272W-BYMR272W-B 108 nt1.65□□□□□ -2.15
NDC1P32500 YOR008C-AYOR008C-A 225 nt1.65□□□□□ -2.15
NDC1P32500 MSC6YOR354C 2079 nt1.65□□□□□ -2.15
NDC1P32500 PEP1YBL017C 4740 nt1.65□□□□□ -2.15
NDC1P32500 SSS1YDR086C 243 nt1.64□□□□□ -2.15
NDC1P32500 YGL188C-AYGL188C-A 141 nt1.64□□□□□ -2.15
NDC1P32500 SCW11YGL028C 1629 nt1.64□□□□□ -2.15
NDC1P32500 HIR3YJR140C 4947 nt1.63□□□□□ -2.15
NDC1P32500 ZIP1YDR285W 2628 nt1.63□□□□□ -2.15
NDC1P32500 IRC20YLR247C 4671 nt1.63□□□□□ -2.15
NDC1P32500 snR80snR80 171 nt1.63□□□□□ -2.15
NDC1P32500 SDH2YLL041C 801 nt1.63□□□□□ -2.15
NDC1P32500 YMR247W-AYMR247W-A 144 nt1.63□□□□□ -2.15
NDC1P32500 BPH1YCR032W 6504 nt1.63□□□□□ -2.15
NDC1P32500 MSH5YDL154W 2706 nt1.62□□□□□ -2.15
NDC1P32500 LCD1YDR499W 2244 nt1.62□□□□□ -2.15
NDC1P32500 INA22YIR024C 651 nt1.62□□□□□ -2.15
NDC1P32500 snR49snR49 165 nt1.62□□□□□ -2.15
NDC1P32500 MAK10YEL053C 2202 nt1.62□□□□□ -2.15
NDC1P32500 MPT5YGL178W 2580 nt1.61□□□□□ -2.15
NDC1P32500 DCP2YNL118C 2913 nt1.61□□□□□ -2.15
NDC1P32500 NIP100YPL174C 2607 nt1.61□□□□□ -2.15
NDC1P32500 YOL160WYOL160W 342 nt1.61□□□□□ -2.15
NDC1P32500 FAB1YFR019W 6837 nt1.61□□□□□ -2.15
NDC1P32500 LHS1YKL073W 2646 nt1.61□□□□□ -2.15
NDC1P32500 PKH3YDR466W 2697 nt1.61□□□□□ -2.15
NDC1P32500 SPT21YMR179W 2277 nt1.6□□□□□ -2.15
NDC1P32500 SPC98YNL126W 2541 nt1.6□□□□□ -2.15
NDC1P32500 YGL041CYGL041C 204 nt1.6□□□□□ -2.15
NDC1P32500 YBR064WYBR064W 429 nt1.6□□□□□ -2.15
NDC1P32500 ENV11YGR071C 2583 nt1.6□□□□□ -2.15
NDC1P32500 SPG3YDR504C 384 nt1.59□□□□□ -2.15
NDC1P32500 CSE2YNR010W 450 nt1.59□□□□□ -2.15
NDC1P32500 VIK1YPL253C 1944 nt1.59□□□□□ -2.15
NDC1P32500 CTR9YOL145C 3234 nt1.59□□□□□ -2.16
NDC1P32500 RLM1YPL089C 2031 nt1.59□□□□□ -2.16
NDC1P32500 ADR1YDR216W 3972 nt1.58□□□□□ -2.16
NDC1P32500 YMR242W-AYMR242W-A 90 nt1.58□□□□□ -2.16
NDC1P32500 YNL028WYNL028W 318 nt1.58□□□□□ -2.16
NDC1P32500 MLH3YPL164C 2148 nt1.58□□□□□ -2.16
NDC1P32500 IRE1YHR079C 3348 nt1.58□□□□□ -2.16
NDC1P32500 YJR039WYJR039W 3366 nt1.58□□□□□ -2.16
NDC1P32500 YDR182W-AYDR182W-A 204 nt1.57□□□□□ -2.16
NDC1P32500 YMR172C-AYMR172C-A 384 nt1.57□□□□□ -2.16
NDC1P32500 YOR015WYOR015W 360 nt1.57□□□□□ -2.16
NDC1P32500 SAS3YBL052C 2496 nt1.57□□□□□ -2.16
NDC1P32500 ZIP2YGL249W 2115 nt1.57□□□□□ -2.16
NDC1P32500 PAU3YCR104W 375 nt1.56□□□□□ -2.16
NDC1P32500 YLR120W-AYLR120W-A 102 nt1.56□□□□□ -2.16
NDC1P32500 ABF2YMR072W 552 nt1.56□□□□□ -2.16
NDC1P32500 YOL155W-AYOL155W-A 135 nt1.56□□□□□ -2.16
NDC1P32500 YCK3YER123W 1575 nt1.55□□□□□ -2.16
NDC1P32500 HMI1YOL095C 2121 nt1.55□□□□□ -2.16
NDC1P32500 APL2YKL135C 2181 nt1.55□□□□□ -2.16
NDC1P32500 YLR419WYLR419W 4308 nt1.55□□□□□ -2.16
NDC1P32500 YJL197C-AYJL197C-A 282 nt1.55□□□□□ -2.16
NDC1P32500 MSH6YDR097C 3729 nt1.55□□□□□ -2.16
NDC1P32500 CDC36YDL165W 576 nt1.54□□□□□ -2.16
NDC1P32500 YGL052WYGL052W 306 nt1.54□□□□□ -2.16
NDC1P32500 JLP2YMR132C 627 nt1.54□□□□□ -2.16
NDC1P32500 YCL023CYCL023C 348 nt1.54□□□□□ -2.16
NDC1P32500 PIG1YLR273C 1947 nt1.54□□□□□ -2.16
NDC1P32500 RAD34YDR314C 2079 nt1.54□□□□□ -2.16
NDC1P32500 SEY1YOR165W 2331 nt1.54□□□□□ -2.16
NDC1P32500 DGR2YKL121W 2559 nt1.53□□□□□ -2.16
NDC1P32500 ATG11YPR049C 3537 nt1.53□□□□□ -2.16
NDC1P32500 YOR093CYOR093C 4947 nt1.53□□□□□ -2.16
NDC1P32500 SBE22YHR103W 2559 nt1.53□□□□□ -2.16
NDC1P32500 YMR321CYMR321C 318 nt1.53□□□□□ -2.16
NDC1P32500 YOR108C-AYOR108C-A 210 nt1.53□□□□□ -2.16
NDC1P32500 SEC63YOR254C 1992 nt1.53□□□□□ -2.16
NDC1P32500 PDE2YOR360C 1581 nt1.53□□□□□ -2.16
NDC1P32500 FRK1YPL141C 2598 nt1.53□□□□□ -2.16
NDC1P32500 MAD1YGL086W 2250 nt1.52□□□□□ -2.17
NDC1P32500 TDA9YML081W 3756 nt1.52□□□□□ -2.17
NDC1P32500 VPS54YDR027C 2670 nt1.52□□□□□ -2.17
NDC1P32500 snR55snR55 98 nt1.52□□□□□ -2.17
NDC1P32500 YBR174CYBR174C 315 nt1.52□□□□□ -2.17
NDC1P32500 AI5_ALPHAQ0070 1893 nt1.52□□□□□ -2.17
NDC1P32500 IRA1YBR140C 9279 nt1.52□□□□□ -2.17
NDC1P32500 SPO75YLL005C 2607 nt1.52□□□□□ -2.17
NDC1P32500 PAU2YEL049W 363 nt1.51□□□□□ -2.17
NDC1P32500 RPL34BYIL052C 366 nt1.51□□□□□ -2.17
NDC1P32500 NPR2YEL062W 1848 nt1.51□□□□□ -2.17
NDC1P32500 NOC3YLR002C 1992 nt1.5□□□□□ -2.17
NDC1P32500 RPL31AYDL075W 342 nt1.5□□□□□ -2.17
NDC1P32500 YMR307C-AYMR307C-A 195 nt1.5□□□□□ -2.17
NDC1P32500 IES4YOR189W 351 nt1.5□□□□□ -2.17
NDC1P32500 CFT1YDR301W 4074 nt1.5□□□□□ -2.17
NDC1P32500 TBS1YBR150C 3285 nt1.49□□□□□ -2.17
NDC1P32500 tM(CAU)Q1tM(CAU)Q1 76 nt1.49□□□□□ -2.17
NDC1P32500 RPS27BYHR021C 249 nt1.49□□□□□ -2.17
NDC1P32500 YBL008W-AYBL008W-A 240 nt1.49□□□□□ -2.17
NDC1P32500 YMR175W-AYMR175W-A 195 nt1.49□□□□□ -2.17
NDC1P32500 YOR019WYOR019W 2193 nt1.49□□□□□ -2.17
NDC1P32500 MON2YNL297C 4911 nt1.48□□□□□ -2.17
NDC1P32500 SFB2YNL049C 2631 nt1.48□□□□□ -2.17
Retrieved 100 of 7,029 protein–RNA pairs in 15.5 ms