Protein–RNA interactions for Protein: Q9Y597

KCTD3, BTB/POZ domain-containing protein KCTD3, humanhuman

Predictions only

Length 815 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCTD3Q9Y597 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
KCTD3Q9Y597 ISCU-212ENST00000547005 795 ntTSL 3 BASIC20.26■□□□□ 0.83
KCTD3Q9Y597 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
KCTD3Q9Y597 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
KCTD3Q9Y597 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
KCTD3Q9Y597 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
KCTD3Q9Y597 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
KCTD3Q9Y597 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.25■□□□□ 0.83
KCTD3Q9Y597 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
KCTD3Q9Y597 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
KCTD3Q9Y597 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC20.25■□□□□ 0.83
KCTD3Q9Y597 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
KCTD3Q9Y597 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC20.25■□□□□ 0.83
KCTD3Q9Y597 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
KCTD3Q9Y597 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC20.25■□□□□ 0.83
KCTD3Q9Y597 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
KCTD3Q9Y597 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC20.25■□□□□ 0.83
KCTD3Q9Y597 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
KCTD3Q9Y597 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
KCTD3Q9Y597 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC20.25■□□□□ 0.83
KCTD3Q9Y597 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC20.25■□□□□ 0.83
KCTD3Q9Y597 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
KCTD3Q9Y597 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
KCTD3Q9Y597 ABHD17AP1-201ENST00000358206 933 ntBASIC20.25■□□□□ 0.83
KCTD3Q9Y597 BX276092.2-201ENST00000417668 665 ntBASIC20.25■□□□□ 0.83
KCTD3Q9Y597 GUSBP6-202ENST00000438529 1198 ntBASIC20.25■□□□□ 0.83
KCTD3Q9Y597 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC20.25■□□□□ 0.83
KCTD3Q9Y597 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC20.25■□□□□ 0.83
KCTD3Q9Y597 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC20.25■□□□□ 0.83
KCTD3Q9Y597 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC20.25■□□□□ 0.83
KCTD3Q9Y597 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
KCTD3Q9Y597 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
KCTD3Q9Y597 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
KCTD3Q9Y597 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
KCTD3Q9Y597 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC20.25■□□□□ 0.83
KCTD3Q9Y597 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
KCTD3Q9Y597 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC20.25■□□□□ 0.83
KCTD3Q9Y597 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
KCTD3Q9Y597 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
KCTD3Q9Y597 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
KCTD3Q9Y597 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
KCTD3Q9Y597 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC20.24■□□□□ 0.83
KCTD3Q9Y597 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
KCTD3Q9Y597 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.24■□□□□ 0.83
KCTD3Q9Y597 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
KCTD3Q9Y597 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
KCTD3Q9Y597 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC20.24■□□□□ 0.83
KCTD3Q9Y597 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
KCTD3Q9Y597 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC20.24■□□□□ 0.83
KCTD3Q9Y597 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC20.24■□□□□ 0.83
KCTD3Q9Y597 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC20.24■□□□□ 0.83
KCTD3Q9Y597 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
KCTD3Q9Y597 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
KCTD3Q9Y597 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
KCTD3Q9Y597 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
KCTD3Q9Y597 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC20.23■□□□□ 0.83
KCTD3Q9Y597 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
KCTD3Q9Y597 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
KCTD3Q9Y597 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
KCTD3Q9Y597 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC20.23■□□□□ 0.83
KCTD3Q9Y597 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
KCTD3Q9Y597 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
KCTD3Q9Y597 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.22■□□□□ 0.83
KCTD3Q9Y597 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
KCTD3Q9Y597 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
KCTD3Q9Y597 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
KCTD3Q9Y597 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
KCTD3Q9Y597 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC20.22■□□□□ 0.83
KCTD3Q9Y597 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC20.22■□□□□ 0.83
KCTD3Q9Y597 MIPEPP3-201ENST00000412105 444 ntBASIC20.22■□□□□ 0.83
KCTD3Q9Y597 TSPY6P-201ENST00000448518 926 ntBASIC20.22■□□□□ 0.83
KCTD3Q9Y597 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
KCTD3Q9Y597 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
KCTD3Q9Y597 AL589743.5-201ENST00000616611 1050 ntBASIC20.22■□□□□ 0.83
KCTD3Q9Y597 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
KCTD3Q9Y597 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
KCTD3Q9Y597 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
KCTD3Q9Y597 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC20.22■□□□□ 0.83
KCTD3Q9Y597 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
KCTD3Q9Y597 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
KCTD3Q9Y597 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
KCTD3Q9Y597 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
KCTD3Q9Y597 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
KCTD3Q9Y597 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
KCTD3Q9Y597 SLC25A24-204ENST00000569674 2357 ntBASIC20.21■□□□□ 0.83
KCTD3Q9Y597 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
KCTD3Q9Y597 LSM12P1-201ENST00000411836 588 ntBASIC20.21■□□□□ 0.83
KCTD3Q9Y597 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
KCTD3Q9Y597 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC20.21■□□□□ 0.83
KCTD3Q9Y597 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
KCTD3Q9Y597 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC20.21■□□□□ 0.83
KCTD3Q9Y597 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
KCTD3Q9Y597 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC20.21■□□□□ 0.83
KCTD3Q9Y597 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
KCTD3Q9Y597 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
KCTD3Q9Y597 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.21■□□□□ 0.83
KCTD3Q9Y597 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
KCTD3Q9Y597 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.21■□□□□ 0.83
KCTD3Q9Y597 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
KCTD3Q9Y597 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms