RNA–Protein interactions for RNA: ENST00000361566.7

KRT19-201, Transcript of keratin 19, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT19, Length 1,390 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT19-201ENST00000361566 NISCHQ9Y2I1 1504 aa47.92■■■■■ 5.26
KRT19-201ENST00000361566 CCDC180Q9P1Z9 1646 aa42.31■■■■■ 4.36
KRT19-201ENST00000361566 ABCC9O60706 1549 aa41.1■■■■■ 4.17
KRT19-201ENST00000361566 ZCCHC6Q5VYS8 1495 aaKnown RBP40.03■■■■■ 4
KRT19-201ENST00000361566 DCAF8L2P0C7V8 631 aa39.8■■■■□ 3.96
KRT19-201ENST00000361566 DCAF1Q9Y4B6 1507 aa39.73■■■■□ 3.95
KRT19-201ENST00000361566 MYO15BQ96JP2 1530 aa39.69■■■■□ 3.94
KRT19-201ENST00000361566 NACADO15069 1562 aa39.67■■■■□ 3.94
KRT19-201ENST00000361566 RB1CC1Q8TDY2 1594 aa39.53■■■■□ 3.92
KRT19-201ENST00000361566 SCRIBQ14160 1630 aa38.57■■■■□ 3.77
KRT19-201ENST00000361566 UNC13AQ9UPW8 1703 aa38.56■■■■□ 3.76
KRT19-201ENST00000361566 PABPN1Q86U42 306 aaKnown RBP eCLIP38.34■■■■□ 3.73
KRT19-201ENST00000361566 BICRAQ9NZM4 1560 aa38.26■■■■□ 3.72
KRT19-201ENST00000361566 DNAJC5BQ9UF47 199 aa38.24■■■■□ 3.71
KRT19-201ENST00000361566 SHROOM4Q9ULL8 1493 aa38.16■■■■□ 3.7
KRT19-201ENST00000361566 CECR2Q9BXF3 1484 aa37.22■■■■□ 3.55
KRT19-201ENST00000361566 EIF4G1Q04637 1599 aaKnown RBP37.21■■■■□ 3.55
KRT19-201ENST00000361566 BAZ1AQ9NRL2 1556 aaPredicted RBP37.1■■■■□ 3.53
KRT19-201ENST00000361566 CC2D2AQ9P2K1 1620 aa37.08■■■■□ 3.53
KRT19-201ENST00000361566 SMARCA4P51532 1647 aa37.01■■■■□ 3.52
KRT19-201ENST00000361566 MROH2BQ7Z745 1585 aa36.9■■■■□ 3.5
KRT19-201ENST00000361566 RSF1Q96T23 1441 aaPredicted RBP36.75■■■■□ 3.47
KRT19-201ENST00000361566 SMARCA2P51531 1590 aa36.69■■■■□ 3.46
KRT19-201ENST00000361566 ATAD2BQ9ULI0 1458 aa36.69■■■■□ 3.46
KRT19-201ENST00000361566 PEG3Q9GZU2 1588 aa36.68■■■■□ 3.46
KRT19-201ENST00000361566 NCAPD3P42695 1498 aa36.61■■■■□ 3.45
KRT19-201ENST00000361566 WIZO95785 1651 aa36.52■■■■□ 3.44
KRT19-201ENST00000361566 HMGXB3Q12766 1538 aa36.44■■■■□ 3.42
KRT19-201ENST00000361566 BAZ1BQ9UIG0 1483 aaKnown RBP36.41■■■■□ 3.42
KRT19-201ENST00000361566 SUPT5HO00267 1087 aaKnown RBP36.31■■■■□ 3.4
KRT19-201ENST00000361566 TOP2AP11388 1531 aaKnown RBP36.2■■■■□ 3.39
KRT19-201ENST00000361566 CCDC88BA6NC98 1476 aa35.8■■■■□ 3.32
KRT19-201ENST00000361566 CADPSQ9ULU8 1353 aa35.58■■■■□ 3.29
KRT19-201ENST00000361566 LAMC3Q9Y6N6 1575 aa35.51■■■■□ 3.27
KRT19-201ENST00000361566 ERCC6Q03468 1493 aa35.49■■■■□ 3.27
KRT19-201ENST00000361566 CFTRP13569 1480 aa35.48■■■■□ 3.27
KRT19-201ENST00000361566 NESP48681 1621 aa35.42■■■■□ 3.26
KRT19-201ENST00000361566 CUX2O14529 1486 aa35.29■■■■□ 3.24
KRT19-201ENST00000361566 PDS5BQ9NTI5 1447 aa35.29■■■■□ 3.24
KRT19-201ENST00000361566 PRDM2Q13029 1718 aa35.21■■■■□ 3.23
KRT19-201ENST00000361566 FANCD2Q9BXW9 1451 aa35.12■■■■□ 3.21
KRT19-201ENST00000361566 CEP164Q9UPV0 1460 aa35.01■■■■□ 3.2
KRT19-201ENST00000361566 KIF21AQ7Z4S6 1674 aa35.01■■■■□ 3.19
KRT19-201ENST00000361566 DNAJC5Q9H3Z4 198 aa34.91■■■■□ 3.18
KRT19-201ENST00000361566 THOC2Q8NI27 1593 aaKnown RBP34.91■■■■□ 3.18
KRT19-201ENST00000361566 MRC2Q9UBG0 1479 aa34.83■■■■□ 3.17
KRT19-201ENST00000361566 ABCC8Q09428 1581 aa34.76■■■■□ 3.15
KRT19-201ENST00000361566 URB2Q14146 1524 aaKnown RBP34.69■■■■□ 3.14
KRT19-201ENST00000361566 WDR62O43379 1518 aa34.68■■■■□ 3.14
KRT19-201ENST00000361566 WRNQ14191 1432 aaPredicted RBP eCLIP34.65■■■■□ 3.14
KRT19-201ENST00000361566 DNMBPQ6XZF7 1577 aa34.64■■■■□ 3.14
KRT19-201ENST00000361566 TOPBP1Q92547 1522 aa34.62■■■■□ 3.13
KRT19-201ENST00000361566 CUX1P39880 1505 aa34.58■■■■□ 3.13
KRT19-201ENST00000361566 TOP2BQ02880 1626 aa34.48■■■■□ 3.11
KRT19-201ENST00000361566 BIVM-ERCC5R4GMW8 1640 aa34.46■■■■□ 3.11
KRT19-201ENST00000361566 SYNJ1O43426 1573 aa34.45■■■■□ 3.1
KRT19-201ENST00000361566 FGD5Q6ZNL6 1462 aa34.37■■■■□ 3.09
KRT19-201ENST00000361566 POLA1P09884 1462 aaPredicted RBP34.36■■■■□ 3.09
KRT19-201ENST00000361566 TRIM41Q8WV44 630 aa34.33■■■■□ 3.09
KRT19-201ENST00000361566 CHIC1Q5VXU3 224 aa34.31■■■■□ 3.08
KRT19-201ENST00000361566 SOGA1O94964 1423 aa34.29■■■■□ 3.08
KRT19-201ENST00000361566 IFT140Q96RY7 1462 aa34.28■■■■□ 3.08
KRT19-201ENST00000361566 RAD54L2Q9Y4B4 1467 aa34.19■■■■□ 3.06
KRT19-201ENST00000361566 TARBP1Q13395 1621 aaKnown RBP34.18■■■■□ 3.06
KRT19-201ENST00000361566 ABCA10Q8WWZ4 1543 aa34.11■■■■□ 3.05
KRT19-201ENST00000361566 WDR97A6NE52 1622 aa34.01■■■■□ 3.04
KRT19-201ENST00000361566 ZNF608Q9ULD9 1512 aaPredicted RBP34■■■■□ 3.03
KRT19-201ENST00000361566 TDRD9Q8NDG6 1382 aaKnown RBP33.98■■■■□ 3.03
KRT19-201ENST00000361566 AQRO60306 1485 aaKnown RBP eCLIP33.93■■■■□ 3.028e-8■■■■■ 39.5
KRT19-201ENST00000361566 KIF27Q86VH2 1401 aa33.9■■■■□ 3.02
KRT19-201ENST00000361566 GAPVD1Q14C86 1478 aa33.89■■■■□ 3.02
KRT19-201ENST00000361566 EIF4G3O43432 1585 aaKnown RBP33.88■■■■□ 3.01
KRT19-201ENST00000361566 ABCA5Q8WWZ7 1642 aa33.86■■■■□ 3.01
KRT19-201ENST00000361566 GRIN2BQ13224 1484 aa33.8■■■■□ 3
KRT19-201ENST00000361566 OSCARQ8IYS5 282 aa33.76■■■■□ 3
KRT19-201ENST00000361566 ERICH3Q5RHP9 1530 aa33.72■■■□□ 2.99
KRT19-201ENST00000361566 EEA1Q15075 1411 aa33.72■■■□□ 2.99
KRT19-201ENST00000361566 RUSC2Q8N2Y8 1516 aa33.71■■■□□ 2.99
KRT19-201ENST00000361566 PBRM1Q86U86 1689 aa33.7■■■□□ 2.98
KRT19-201ENST00000361566 IGF1RP08069 1367 aa33.69■■■□□ 2.98
KRT19-201ENST00000361566 MAGI1Q96QZ7 1491 aaPredicted RBP33.64■■■□□ 2.98
KRT19-201ENST00000361566 SNAPC4Q5SXM2 1469 aa33.6■■■□□ 2.97
KRT19-201ENST00000361566 CSRNP3Q8WYN3 585 aa33.59■■■□□ 2.97
KRT19-201ENST00000361566 FHAD1B1AJZ9 1412 aa33.54■■■□□ 2.96
KRT19-201ENST00000361566 CUL7Q14999 1698 aa33.51■■■□□ 2.96
KRT19-201ENST00000361566 FAM9AQ8IZU1 332 aaPredicted RBP33.51■■■□□ 2.96
KRT19-201ENST00000361566 CARMIL1Q5VZK9 1371 aa33.51■■■□□ 2.95
KRT19-201ENST00000361566 SYNJ2O15056 1496 aa33.5■■■□□ 2.95
KRT19-201ENST00000361566 ADAMTS12P58397 1594 aa33.48■■■□□ 2.95
KRT19-201ENST00000361566 CHMP7Q8WUX9 453 aaPredicted RBP33.47■■■□□ 2.95
KRT19-201ENST00000361566 FBLN2P98095 1184 aa33.42■■■□□ 2.94
KRT19-201ENST00000361566 PRXQ9BXM0 1461 aa33.39■■■□□ 2.94
KRT19-201ENST00000361566 RAPGEF2Q9Y4G8 1499 aa33.36■■■□□ 2.93
KRT19-201ENST00000361566 GRIN2AQ12879 1464 aa33.34■■■□□ 2.93
KRT19-201ENST00000361566 CHD1O14646 1710 aa33.32■■■□□ 2.93
KRT19-201ENST00000361566 KIF21BO75037 1637 aa33.23■■■□□ 2.91
KRT19-201ENST00000361566 NUP160Q12769 1436 aa33.19■■■□□ 2.9
KRT19-201ENST00000361566 RIMBP3CA6NJZ7 1639 aa33.18■■■□□ 2.9
KRT19-201ENST00000361566 RIMBP3BA6NNM3 1639 aa33.18■■■□□ 2.9
KRT19-201ENST00000361566 RIMBP3Q9UFD9 1639 aa33.18■■■□□ 2.9
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms