Protein–RNA interactions for Protein: Q9BRG1

VPS25, Vacuolar protein-sorting-associated protein 25, humanhuman

Predictions only

Length 176 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25Q9BRG1 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
VPS25Q9BRG1 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
VPS25Q9BRG1 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
VPS25Q9BRG1 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
VPS25Q9BRG1 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
VPS25Q9BRG1 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
VPS25Q9BRG1 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
VPS25Q9BRG1 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
VPS25Q9BRG1 BOC-212ENST00000485230 2173 ntTSL 2 BASIC14.13□□□□□ -0.15
VPS25Q9BRG1 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC14.13□□□□□ -0.15
VPS25Q9BRG1 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
VPS25Q9BRG1 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
VPS25Q9BRG1 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
VPS25Q9BRG1 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
VPS25Q9BRG1 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
VPS25Q9BRG1 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC14.13□□□□□ -0.15
VPS25Q9BRG1 TPR-209ENST00000613151 2478 ntTSL 5 BASIC14.13□□□□□ -0.15
VPS25Q9BRG1 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC14.13□□□□□ -0.15
VPS25Q9BRG1 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
VPS25Q9BRG1 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
VPS25Q9BRG1 AC084018.2-201ENST00000613093 2607 ntBASIC14.12□□□□□ -0.15
VPS25Q9BRG1 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VPS25Q9BRG1 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VPS25Q9BRG1 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC14.12□□□□□ -0.15
VPS25Q9BRG1 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
VPS25Q9BRG1 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
VPS25Q9BRG1 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC14.12□□□□□ -0.15
VPS25Q9BRG1 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC14.12□□□□□ -0.15
VPS25Q9BRG1 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
VPS25Q9BRG1 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC14.12□□□□□ -0.15
VPS25Q9BRG1 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
VPS25Q9BRG1 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC14.12□□□□□ -0.15
VPS25Q9BRG1 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VPS25Q9BRG1 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VPS25Q9BRG1 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
VPS25Q9BRG1 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC14.12□□□□□ -0.15
VPS25Q9BRG1 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VPS25Q9BRG1 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
VPS25Q9BRG1 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
VPS25Q9BRG1 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC14.12□□□□□ -0.15
VPS25Q9BRG1 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
VPS25Q9BRG1 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
VPS25Q9BRG1 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
VPS25Q9BRG1 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
VPS25Q9BRG1 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
VPS25Q9BRG1 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
VPS25Q9BRG1 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
VPS25Q9BRG1 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
VPS25Q9BRG1 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
VPS25Q9BRG1 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC14.11□□□□□ -0.15
VPS25Q9BRG1 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
VPS25Q9BRG1 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
VPS25Q9BRG1 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
VPS25Q9BRG1 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
VPS25Q9BRG1 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
VPS25Q9BRG1 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
VPS25Q9BRG1 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC14.11□□□□□ -0.15
VPS25Q9BRG1 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
VPS25Q9BRG1 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
VPS25Q9BRG1 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
VPS25Q9BRG1 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC14.1□□□□□ -0.15
VPS25Q9BRG1 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
VPS25Q9BRG1 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC14.1□□□□□ -0.15
VPS25Q9BRG1 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC14.1□□□□□ -0.15
VPS25Q9BRG1 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
VPS25Q9BRG1 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
VPS25Q9BRG1 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
VPS25Q9BRG1 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
VPS25Q9BRG1 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
VPS25Q9BRG1 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
VPS25Q9BRG1 AL390961.4-201ENST00000623958 2535 ntBASIC14.1□□□□□ -0.15
VPS25Q9BRG1 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
VPS25Q9BRG1 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC14.1□□□□□ -0.15
VPS25Q9BRG1 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
VPS25Q9BRG1 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
VPS25Q9BRG1 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
VPS25Q9BRG1 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC14.1□□□□□ -0.15
VPS25Q9BRG1 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC14.1□□□□□ -0.15
VPS25Q9BRG1 ALDH1A3-203ENST00000557963 1670 ntBASIC14.1□□□□□ -0.15
VPS25Q9BRG1 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
VPS25Q9BRG1 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
VPS25Q9BRG1 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC14.1□□□□□ -0.15
VPS25Q9BRG1 AL162727.3-201ENST00000635661 2787 ntBASIC14.1□□□□□ -0.15
VPS25Q9BRG1 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC14.1□□□□□ -0.15
VPS25Q9BRG1 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC14.1□□□□□ -0.15
VPS25Q9BRG1 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
VPS25Q9BRG1 OVCH1-AS1-204ENST00000641955 5529 ntBASIC14.1□□□□□ -0.15
VPS25Q9BRG1 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
VPS25Q9BRG1 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
VPS25Q9BRG1 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
VPS25Q9BRG1 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
VPS25Q9BRG1 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
VPS25Q9BRG1 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
VPS25Q9BRG1 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
VPS25Q9BRG1 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
VPS25Q9BRG1 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
VPS25Q9BRG1 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC14.09□□□□□ -0.15
VPS25Q9BRG1 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
VPS25Q9BRG1 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
VPS25Q9BRG1 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms