RNA–Protein interactions for RNA: ENST00000407847.4

PRDM6-201, Transcript of PR/SET domain 6, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRDM6, Length 9,267 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM6-201ENST00000407847 PELP1Q8IZL8 1130 aaKnown RBP25.04■■□□□ 1.6
PRDM6-201ENST00000407847 MYT1Q01538 1121 aa24.36■■□□□ 1.49
PRDM6-201ENST00000407847 CCER1Q8TC90 406 aaPredicted RBP23.71■■□□□ 1.39
PRDM6-201ENST00000407847 NISCHQ9Y2I1 1504 aa23.42■■□□□ 1.34
PRDM6-201ENST00000407847 DCAF8L2P0C7V8 631 aa23.36■■□□□ 1.33
PRDM6-201ENST00000407847 ZEB1P37275 1124 aaPredicted RBP23.26■■□□□ 1.31
PRDM6-201ENST00000407847 CENPBP07199 599 aaPredicted RBP23.26■■□□□ 1.31
PRDM6-201ENST00000407847 YTHDC1Q96MU7 727 aaKnown RBP23.16■■□□□ 1.3
PRDM6-201ENST00000407847 ERICH6Q7L0X2 663 aa23.14■■□□□ 1.29
PRDM6-201ENST00000407847 FAM9AQ8IZU1 332 aaPredicted RBP23.13■■□□□ 1.29
PRDM6-201ENST00000407847 APLP2Q06481 763 aa23.1■■□□□ 1.29
PRDM6-201ENST00000407847 SUPT5HO00267 1087 aaKnown RBP22.69■■□□□ 1.22
PRDM6-201ENST00000407847 NEFLP07196 543 aa22.67■■□□□ 1.22
PRDM6-201ENST00000407847 TTBK1Q5TCY1 1321 aaPredicted RBP22.44■■□□□ 1.18
PRDM6-201ENST00000407847 DAXXQ9UER7 740 aaPredicted RBP22.23■■□□□ 1.15
PRDM6-201ENST00000407847 PCGF6Q9BYE7 350 aa21.98■■□□□ 1.11
PRDM6-201ENST00000407847 SHROOM4Q9ULL8 1493 aa21.93■■□□□ 1.1
PRDM6-201ENST00000407847 RTL5Q5HYW3 569 aaPredicted RBP21.8■■□□□ 1.08
PRDM6-201ENST00000407847 CLSPNQ9HAW4 1339 aa21.64■■□□□ 1.05
PRDM6-201ENST00000407847 TRIM26Q12899 539 aaPredicted RBP21.63■■□□□ 1.05
PRDM6-201ENST00000407847 TRIM41Q8WV44 630 aa21.62■■□□□ 1.05
PRDM6-201ENST00000407847 ZNF316A6NFI3 1004 aaPredicted RBP21.59■■□□□ 1.05
PRDM6-201ENST00000407847 MYT1LQ9UL68 1186 aa21.54■■□□□ 1.04
PRDM6-201ENST00000407847 UBTFP17480 764 aaKnown RBP21.37■■□□□ 1.01
PRDM6-201ENST00000407847 GLIPR1L2Q4G1C9 344 aa21.36■■□□□ 1.01
PRDM6-201ENST00000407847 HRCP23327 699 aa21.32■■□□□ 1
PRDM6-201ENST00000407847 EHMT2Q96KQ7 1210 aa21.3■■□□□ 1
PRDM6-201ENST00000407847 ANP32BQ92688 251 aaKnown RBP21.03■□□□□ 0.96
PRDM6-201ENST00000407847 ATP1B4Q9UN42 357 aaPredicted RBP21.02■□□□□ 0.96
PRDM6-201ENST00000407847 CDK11AQ9UQ88 783 aaPredicted RBP21■□□□□ 0.95
PRDM6-201ENST00000407847 NEFMP07197 916 aa20.99■□□□□ 0.95
PRDM6-201ENST00000407847 ZBTB47Q9UFB7 747 aaPredicted RBP20.96■□□□□ 0.95
PRDM6-201ENST00000407847 DIEXFQ68CQ4 756 aaKnown RBP20.93■□□□□ 0.94
PRDM6-201ENST00000407847 ANP32AP39687 249 aaKnown RBP20.9■□□□□ 0.94
PRDM6-201ENST00000407847 ANP32CO43423 234 aa20.72■□□□□ 0.91
PRDM6-201ENST00000407847 ANP32EQ9BTT0 268 aa20.65■□□□□ 0.9
PRDM6-201ENST00000407847 RANGAP1P46060 587 aaPredicted RBP20.64■□□□□ 0.9
PRDM6-201ENST00000407847 UPF2Q9HAU5 1272 aaKnown RBP20.64■□□□□ 0.9
PRDM6-201ENST00000407847 ACIN1Q9UKV3 1341 aaKnown RBP20.62■□□□□ 0.89
PRDM6-201ENST00000407847 EIF5BO60841 1220 aaKnown RBP20.62■□□□□ 0.89
PRDM6-201ENST00000407847 CCDC180Q9P1Z9 1646 aa20.51■□□□□ 0.87
PRDM6-201ENST00000407847 CANXP27824 592 aaKnown RBP20.47■□□□□ 0.87
PRDM6-201ENST00000407847 POLR3GLQ9BT43 218 aa20.47■□□□□ 0.87
PRDM6-201ENST00000407847 TNNT2P45379 298 aaPredicted RBP20.47■□□□□ 0.87
PRDM6-201ENST00000407847 DCAF1Q9Y4B6 1507 aa20.42■□□□□ 0.86
PRDM6-201ENST00000407847 HSP90AA1P07900 732 aaKnown RBP20.38■□□□□ 0.85
PRDM6-201ENST00000407847 GTF3C3Q9Y5Q9 886 aa20.37■□□□□ 0.85
PRDM6-201ENST00000407847 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.36■□□□□ 0.85
PRDM6-201ENST00000407847 HNRNPUL2Q1KMD3 747 aaKnown RBP20.36■□□□□ 0.85
PRDM6-201ENST00000407847 SLC4A1APQ9BWU0 796 aaKnown RBP20.31■□□□□ 0.84
PRDM6-201ENST00000407847 TRIM44Q96DX7 344 aaPredicted RBP20.3■□□□□ 0.84
PRDM6-201ENST00000407847 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.25■□□□□ 0.83
PRDM6-201ENST00000407847 CHIC1Q5VXU3 224 aa20.24■□□□□ 0.83
PRDM6-201ENST00000407847 ITGAEP38570 1179 aa20.23■□□□□ 0.83
PRDM6-201ENST00000407847 NCLP19338 710 aaKnown RBP20.23■□□□□ 0.83
PRDM6-201ENST00000407847 DDRGK1Q96HY6 314 aa20.22■□□□□ 0.83
PRDM6-201ENST00000407847 BECN1Q14457 450 aa20.16■□□□□ 0.82
PRDM6-201ENST00000407847 CDK11BP21127 795 aaKnown RBP20.13■□□□□ 0.81
PRDM6-201ENST00000407847 FAM50AQ14320 339 aaKnown RBP20.12■□□□□ 0.81
PRDM6-201ENST00000407847 GOLGA6L22H0YM25 854 aa20.1■□□□□ 0.81
PRDM6-201ENST00000407847 TRIM52Q96A61 297 aa20.06■□□□□ 0.8
PRDM6-201ENST00000407847 ERICH6BQ5W0A0 696 aa20.06■□□□□ 0.8
PRDM6-201ENST00000407847 TONSLQ96HA7 1378 aa20.02■□□□□ 0.8
PRDM6-201ENST00000407847 MYH16Q9H6N6 1097 aa19.99■□□□□ 0.79
PRDM6-201ENST00000407847 ARID4BQ4LE39 1312 aaPredicted RBP19.97■□□□□ 0.79
PRDM6-201ENST00000407847 NEUROD1Q13562 356 aa19.96■□□□□ 0.79
PRDM6-201ENST00000407847 PPARGC1BQ86YN6 1023 aaKnown RBP19.93■□□□□ 0.78
PRDM6-201ENST00000407847 GOLGA6L6A8MZA4 724 aa19.92■□□□□ 0.78
PRDM6-201ENST00000407847 NRDCO43847 1150 aa19.9■□□□□ 0.78
PRDM6-201ENST00000407847 CHMP4BQ9H444 224 aaKnown RBP19.86■□□□□ 0.77
PRDM6-201ENST00000407847 CCDC136Q96JN2 1154 aa19.86■□□□□ 0.77
PRDM6-201ENST00000407847 BCANQ96GW7 911 aa19.85■□□□□ 0.77
PRDM6-201ENST00000407847 CFAP44Q96MT7 982 aa19.85■□□□□ 0.77
PRDM6-201ENST00000407847 PPM1GO15355 546 aaPredicted RBP19.84■□□□□ 0.77
PRDM6-201ENST00000407847 CASC1Q6TDU7 716 aa19.84■□□□□ 0.77
PRDM6-201ENST00000407847 L1TD1Q5T7N2 865 aaKnown RBP19.84■□□□□ 0.77
PRDM6-201ENST00000407847 PTMSP20962 102 aa19.83■□□□□ 0.77
PRDM6-201ENST00000407847 EEA1Q15075 1411 aa19.82■□□□□ 0.76
PRDM6-201ENST00000407847 ZRSR1Q15695 479 aaKnown RBP19.81■□□□□ 0.76
PRDM6-201ENST00000407847 CHAF1AQ13111 956 aaPredicted RBP19.79■□□□□ 0.76
PRDM6-201ENST00000407847 LOC105371045A0A1W2PR82 267 aa19.78■□□□□ 0.76
PRDM6-201ENST00000407847 SLC24A1O60721 1099 aa19.78■□□□□ 0.76
PRDM6-201ENST00000407847 USP35Q9P2H5 1018 aa19.76■□□□□ 0.75
PRDM6-201ENST00000407847 NPM2Q86SE8 214 aaKnown RBP19.74■□□□□ 0.75
PRDM6-201ENST00000407847 FKBP8Q14318 412 aa19.71■□□□□ 0.75
PRDM6-201ENST00000407847 ZNF326Q5BKZ1 582 aaKnown RBP19.68■□□□□ 0.74
PRDM6-201ENST00000407847 CNGB1Q14028 1251 aaPredicted RBP19.67■□□□□ 0.74
PRDM6-201ENST00000407847 HNRNPUQ00839 825 aaKnown RBP eCLIP19.67■□□□□ 0.74
PRDM6-201ENST00000407847 WDR43Q15061 677 aaKnown RBP eCLIP19.67■□□□□ 0.74
PRDM6-201ENST00000407847 TMC1Q8TDI8 760 aa19.65■□□□□ 0.74
PRDM6-201ENST00000407847 MS4A1P11836 297 aa19.64■□□□□ 0.74
PRDM6-201ENST00000407847 CDCA8Q53HL2 280 aa19.63■□□□□ 0.73
PRDM6-201ENST00000407847 RSF1Q96T23 1441 aaPredicted RBP19.6■□□□□ 0.73
PRDM6-201ENST00000407847 PTMAP06454 111 aaKnown RBP19.59■□□□□ 0.73
PRDM6-201ENST00000407847 DNTTIP2Q5QJE6 756 aaKnown RBP19.52■□□□□ 0.72
PRDM6-201ENST00000407847 NBR1Q14596 966 aa19.52■□□□□ 0.72
PRDM6-201ENST00000407847 ESF1Q9H501 851 aaKnown RBP19.51■□□□□ 0.71
PRDM6-201ENST00000407847 SCRIBQ14160 1630 aa19.51■□□□□ 0.71
PRDM6-201ENST00000407847 ZCCHC6Q5VYS8 1495 aaKnown RBP19.48■□□□□ 0.71
PRDM6-201ENST00000407847 CSRNP3Q8WYN3 585 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 194.6 ms