RNA–Protein interactions for RNA: ENST00000358144.6

CNTNAP3-202, Transcript of contactin associated protein like 3, humanhuman

TSL 5 BASIC

Gene CNTNAP3, Length 4,885 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3-202ENST00000358144 DCAF8L2P0C7V8 631 aa24.67■■□□□ 1.54
CNTNAP3-202ENST00000358144 SUPT5HO00267 1087 aaKnown RBP24.58■■□□□ 1.52
CNTNAP3-202ENST00000358144 PELP1Q8IZL8 1130 aaKnown RBP24.47■■□□□ 1.51
CNTNAP3-202ENST00000358144 MYT1Q01538 1121 aa24.16■■□□□ 1.46
CNTNAP3-202ENST00000358144 PCGF6Q9BYE7 350 aa24.05■■□□□ 1.44
CNTNAP3-202ENST00000358144 CENPBP07199 599 aaPredicted RBP23.8■■□□□ 1.4
CNTNAP3-202ENST00000358144 SHROOM4Q9ULL8 1493 aa23.8■■□□□ 1.4
CNTNAP3-202ENST00000358144 EHMT2Q96KQ7 1210 aa23.67■■□□□ 1.38
CNTNAP3-202ENST00000358144 NISCHQ9Y2I1 1504 aa23.67■■□□□ 1.38
CNTNAP3-202ENST00000358144 ZEB1P37275 1124 aaPredicted RBP23.61■■□□□ 1.37
CNTNAP3-202ENST00000358144 ERICH6Q7L0X2 663 aa23.42■■□□□ 1.34
CNTNAP3-202ENST00000358144 HRCP23327 699 aa23.37■■□□□ 1.33
CNTNAP3-202ENST00000358144 CCER1Q8TC90 406 aaPredicted RBP23.21■■□□□ 1.31
CNTNAP3-202ENST00000358144 FAM9AQ8IZU1 332 aaPredicted RBP23.15■■□□□ 1.3
CNTNAP3-202ENST00000358144 APLP2Q06481 763 aa23.09■■□□□ 1.29
CNTNAP3-202ENST00000358144 YTHDC1Q96MU7 727 aaKnown RBP23.08■■□□□ 1.29
CNTNAP3-202ENST00000358144 TTBK1Q5TCY1 1321 aaPredicted RBP23.06■■□□□ 1.28
CNTNAP3-202ENST00000358144 NEFLP07196 543 aa22.87■■□□□ 1.25
CNTNAP3-202ENST00000358144 PPARGC1BQ86YN6 1023 aaKnown RBP22.86■■□□□ 1.25
CNTNAP3-202ENST00000358144 TRIM26Q12899 539 aaPredicted RBP22.85■■□□□ 1.25
CNTNAP3-202ENST00000358144 TRIM41Q8WV44 630 aa22.64■■□□□ 1.21
CNTNAP3-202ENST00000358144 GTF3C3Q9Y5Q9 886 aa22.37■■□□□ 1.17
CNTNAP3-202ENST00000358144 DIEXFQ68CQ4 756 aaKnown RBP22.33■■□□□ 1.16
CNTNAP3-202ENST00000358144 LOC105371045A0A1W2PR82 267 aa22.3■■□□□ 1.16
CNTNAP3-202ENST00000358144 RANGAP1P46060 587 aaPredicted RBP22.28■■□□□ 1.16
CNTNAP3-202ENST00000358144 CHIC1Q5VXU3 224 aa22.26■■□□□ 1.15
CNTNAP3-202ENST00000358144 UBTFP17480 764 aaKnown RBP22.23■■□□□ 1.15
CNTNAP3-202ENST00000358144 ACIN1Q9UKV3 1341 aaKnown RBP22.09■■□□□ 1.13
CNTNAP3-202ENST00000358144 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.08■■□□□ 1.13
CNTNAP3-202ENST00000358144 RTL5Q5HYW3 569 aaPredicted RBP22.07■■□□□ 1.12
CNTNAP3-202ENST00000358144 DAXXQ9UER7 740 aaPredicted RBP22.06■■□□□ 1.12
CNTNAP3-202ENST00000358144 ATP1B4Q9UN42 357 aaPredicted RBP21.9■■□□□ 1.1
CNTNAP3-202ENST00000358144 HNRNPUL2Q1KMD3 747 aaKnown RBP21.89■■□□□ 1.09
CNTNAP3-202ENST00000358144 BCANQ96GW7 911 aa21.85■■□□□ 1.09
CNTNAP3-202ENST00000358144 SCAF1Q9H7N4 1312 aaKnown RBP21.72■■□□□ 1.07
CNTNAP3-202ENST00000358144 ITGAEP38570 1179 aa21.68■■□□□ 1.06
CNTNAP3-202ENST00000358144 ZNF316A6NFI3 1004 aaPredicted RBP21.65■■□□□ 1.06
CNTNAP3-202ENST00000358144 CDK11AQ9UQ88 783 aaPredicted RBP21.64■■□□□ 1.05
CNTNAP3-202ENST00000358144 NEUROD1Q13562 356 aa21.59■■□□□ 1.05
CNTNAP3-202ENST00000358144 POLR3GLQ9BT43 218 aa21.54■■□□□ 1.04
CNTNAP3-202ENST00000358144 CNGB1Q14028 1251 aaPredicted RBP21.49■■□□□ 1.03
CNTNAP3-202ENST00000358144 CLSPNQ9HAW4 1339 aa21.43■■□□□ 1.02
CNTNAP3-202ENST00000358144 EIF5BO60841 1220 aaKnown RBP21.41■■□□□ 1.02
CNTNAP3-202ENST00000358144 ANP32CO43423 234 aa21.33■■□□□ 1
CNTNAP3-202ENST00000358144 MYT1LQ9UL68 1186 aa21.31■■□□□ 1
CNTNAP3-202ENST00000358144 ANP32AP39687 249 aaKnown RBP21.27■■□□□ 1
CNTNAP3-202ENST00000358144 FKBP8Q14318 412 aa21.27■□□□□ 0.99
CNTNAP3-202ENST00000358144 ANP32EQ9BTT0 268 aa21.15■□□□□ 0.98
CNTNAP3-202ENST00000358144 DCAF1Q9Y4B6 1507 aa21.12■□□□□ 0.97
CNTNAP3-202ENST00000358144 GLIPR1L2Q4G1C9 344 aa21.12■□□□□ 0.97
CNTNAP3-202ENST00000358144 NPM2Q86SE8 214 aaKnown RBP21.05■□□□□ 0.96
CNTNAP3-202ENST00000358144 NBR1Q14596 966 aa21.04■□□□□ 0.96
CNTNAP3-202ENST00000358144 FAM50AQ14320 339 aaKnown RBP20.99■□□□□ 0.95
CNTNAP3-202ENST00000358144 BCL11AQ9H165 835 aa20.98■□□□□ 0.95
CNTNAP3-202ENST00000358144 MIER1Q8N108 512 aa20.97■□□□□ 0.95
CNTNAP3-202ENST00000358144 ZBTB47Q9UFB7 747 aaPredicted RBP20.9■□□□□ 0.94
CNTNAP3-202ENST00000358144 HNRNPUQ00839 825 aaKnown RBP eCLIP20.84■□□□□ 0.93
CNTNAP3-202ENST00000358144 TRIM52Q96A61 297 aa20.83■□□□□ 0.92
CNTNAP3-202ENST00000358144 DDX10Q13206 875 aaKnown RBP20.79■□□□□ 0.92
CNTNAP3-202ENST00000358144 CCDC136Q96JN2 1154 aa20.7■□□□□ 0.9
CNTNAP3-202ENST00000358144 SLC4A1APQ9BWU0 796 aaKnown RBP20.7■□□□□ 0.9
CNTNAP3-202ENST00000358144 ANP32BQ92688 251 aaKnown RBP20.68■□□□□ 0.9
CNTNAP3-202ENST00000358144 ZNF326Q5BKZ1 582 aaKnown RBP20.67■□□□□ 0.9
CNTNAP3-202ENST00000358144 IRX6P78412 446 aaPredicted RBP20.65■□□□□ 0.9
CNTNAP3-202ENST00000358144 CANXP27824 592 aaKnown RBP20.63■□□□□ 0.89
CNTNAP3-202ENST00000358144 FAM9BQ8IZU0 186 aa20.61■□□□□ 0.89
CNTNAP3-202ENST00000358144 SUPT16HQ9Y5B9 1047 aaKnown RBP20.58■□□□□ 0.89
CNTNAP3-202ENST00000358144 CSRNP3Q8WYN3 585 aa20.57■□□□□ 0.88
CNTNAP3-202ENST00000358144 ARXQ96QS3 562 aa20.55■□□□□ 0.88
CNTNAP3-202ENST00000358144 RTN4Q9NQC3 1192 aaKnown RBP20.55■□□□□ 0.88
CNTNAP3-202ENST00000358144 MYO15BQ96JP2 1530 aa20.52■□□□□ 0.87
CNTNAP3-202ENST00000358144 UPF2Q9HAU5 1272 aaKnown RBP20.5■□□□□ 0.87
CNTNAP3-202ENST00000358144 NEFMP07197 916 aa20.46■□□□□ 0.87
CNTNAP3-202ENST00000358144 HSP90AA1P07900 732 aaKnown RBP20.46■□□□□ 0.87
CNTNAP3-202ENST00000358144 TONSLQ96HA7 1378 aa20.46■□□□□ 0.87
CNTNAP3-202ENST00000358144 DEKP35659 375 aaKnown RBP20.43■□□□□ 0.86
CNTNAP3-202ENST00000358144 ERICH6BQ5W0A0 696 aa20.42■□□□□ 0.86
CNTNAP3-202ENST00000358144 CCDC180Q9P1Z9 1646 aa20.4■□□□□ 0.86
CNTNAP3-202ENST00000358144 MRS2Q9HD23 443 aa20.4■□□□□ 0.86
CNTNAP3-202ENST00000358144 NOP58Q9Y2X3 529 aaKnown RBP20.38■□□□□ 0.85
CNTNAP3-202ENST00000358144 SALL2Q9Y467 1007 aaPredicted RBP20.37■□□□□ 0.85
CNTNAP3-202ENST00000358144 RBM19Q9Y4C8 960 aaKnown RBP20.37■□□□□ 0.85
CNTNAP3-202ENST00000358144 PPM1GO15355 546 aaPredicted RBP20.36■□□□□ 0.85
CNTNAP3-202ENST00000358144 DDRGK1Q96HY6 314 aa20.36■□□□□ 0.85
CNTNAP3-202ENST00000358144 TMC1Q8TDI8 760 aa20.32■□□□□ 0.84
CNTNAP3-202ENST00000358144 HIRIP3Q9BW71 556 aaPredicted RBP20.31■□□□□ 0.84
CNTNAP3-202ENST00000358144 TRIM44Q96DX7 344 aaPredicted RBP20.28■□□□□ 0.84
CNTNAP3-202ENST00000358144 TSHZ2Q9NRE2 1034 aa20.27■□□□□ 0.84
CNTNAP3-202ENST00000358144 LAS1LQ9Y4W2 734 aaKnown RBP20.27■□□□□ 0.84
CNTNAP3-202ENST00000358144 PPP4R2Q9NY27 417 aa20.26■□□□□ 0.83
CNTNAP3-202ENST00000358144 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.25■□□□□ 0.83
CNTNAP3-202ENST00000358144 NAP1L5Q96NT1 182 aaPredicted RBP20.25■□□□□ 0.83
CNTNAP3-202ENST00000358144 TNNT2P45379 298 aaPredicted RBP20.2■□□□□ 0.82
CNTNAP3-202ENST00000358144 BECN1Q14457 450 aa20.19■□□□□ 0.82
CNTNAP3-202ENST00000358144 P3H3Q8IVL6 736 aa20.17■□□□□ 0.82
CNTNAP3-202ENST00000358144 B4GALNT3Q6L9W6 998 aa20.11■□□□□ 0.81
CNTNAP3-202ENST00000358144 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.11■□□□□ 0.81
CNTNAP3-202ENST00000358144 EIF4G2P78344 907 aaKnown RBP eCLIP20.06■□□□□ 0.8
CNTNAP3-202ENST00000358144 GOLGA6L22H0YM25 854 aa19.99■□□□□ 0.79
CNTNAP3-202ENST00000358144 WDR43Q15061 677 aaKnown RBP eCLIP19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 126.3 ms