RNA–Protein interactions for RNA: ENST00000407967.7

RNFT2-204, Transcript of ring finger protein, transmembrane 2, humanhuman

TSL 5 BASIC

Gene RNFT2, Length 2,415 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT2-204ENST00000407967 NISCHQ9Y2I1 1504 aa37.82■■■■□ 3.64
RNFT2-204ENST00000407967 CCDC180Q9P1Z9 1646 aa32.4■■■□□ 2.78
RNFT2-204ENST00000407967 SHROOM4Q9ULL8 1493 aa32.25■■■□□ 2.75
RNFT2-204ENST00000407967 ZCCHC6Q5VYS8 1495 aaKnown RBP31.95■■■□□ 2.71
RNFT2-204ENST00000407967 SUPT5HO00267 1087 aaKnown RBP31.55■■■□□ 2.64
RNFT2-204ENST00000407967 DCAF8L2P0C7V8 631 aa31.49■■■□□ 2.63
RNFT2-204ENST00000407967 DCAF1Q9Y4B6 1507 aa31.13■■■□□ 2.57
RNFT2-204ENST00000407967 CHIC1Q5VXU3 224 aa30.57■■■□□ 2.48
RNFT2-204ENST00000407967 MYO15BQ96JP2 1530 aa30.45■■■□□ 2.47
RNFT2-204ENST00000407967 SCRIBQ14160 1630 aa30.23■■■□□ 2.43
RNFT2-204ENST00000407967 ABCC9O60706 1549 aa30.13■■■□□ 2.41
RNFT2-204ENST00000407967 NACADO15069 1562 aa30■■■□□ 2.39
RNFT2-204ENST00000407967 RSF1Q96T23 1441 aaPredicted RBP29.89■■■□□ 2.38
RNFT2-204ENST00000407967 LOC105371045A0A1W2PR82 267 aa29.72■■■□□ 2.35
RNFT2-204ENST00000407967 RB1CC1Q8TDY2 1594 aa29.59■■■□□ 2.33
RNFT2-204ENST00000407967 CECR2Q9BXF3 1484 aa29.56■■■□□ 2.32
RNFT2-204ENST00000407967 PCGF6Q9BYE7 350 aa29.53■■■□□ 2.32
RNFT2-204ENST00000407967 MROH2BQ7Z745 1585 aa29.43■■■□□ 2.3
RNFT2-204ENST00000407967 HRCP23327 699 aa29.39■■■□□ 2.3
RNFT2-204ENST00000407967 TRIM41Q8WV44 630 aa29.36■■■□□ 2.29
RNFT2-204ENST00000407967 WIZO95785 1651 aa29.29■■■□□ 2.28
RNFT2-204ENST00000407967 FAM9AQ8IZU1 332 aaPredicted RBP29.18■■■□□ 2.26
RNFT2-204ENST00000407967 BAZ1AQ9NRL2 1556 aaPredicted RBP29.04■■■□□ 2.24
RNFT2-204ENST00000407967 UNC13AQ9UPW8 1703 aa29■■■□□ 2.23
RNFT2-204ENST00000407967 EHMT2Q96KQ7 1210 aa28.98■■■□□ 2.23
RNFT2-204ENST00000407967 TRIM26Q12899 539 aaPredicted RBP28.94■■■□□ 2.22
RNFT2-204ENST00000407967 PPARGC1BQ86YN6 1023 aaKnown RBP28.89■■■□□ 2.22
RNFT2-204ENST00000407967 SMARCA4P51532 1647 aa28.84■■■□□ 2.21
RNFT2-204ENST00000407967 EIF4G1Q04637 1599 aaKnown RBP28.79■■■□□ 2.2
RNFT2-204ENST00000407967 TOP2AP11388 1531 aaKnown RBP28.77■■■□□ 2.2
RNFT2-204ENST00000407967 PABPN1Q86U42 306 aaKnown RBP eCLIP28.7■■■□□ 2.18
RNFT2-204ENST00000407967 BICRAQ9NZM4 1560 aa28.67■■■□□ 2.18
RNFT2-204ENST00000407967 CCDC88BA6NC98 1476 aa28.67■■■□□ 2.18
RNFT2-204ENST00000407967 SMARCA2P51531 1590 aa28.63■■■□□ 2.17
RNFT2-204ENST00000407967 ABCC8Q09428 1581 aa28.6■■■□□ 2.17
RNFT2-204ENST00000407967 PEG3Q9GZU2 1588 aa28.38■■■□□ 2.13
RNFT2-204ENST00000407967 SOGA1O94964 1423 aa28.29■■■□□ 2.12
RNFT2-204ENST00000407967 ZEB1P37275 1124 aaPredicted RBP28.2■■■□□ 2.11
RNFT2-204ENST00000407967 RUSC2Q8N2Y8 1516 aa28.18■■■□□ 2.1
RNFT2-204ENST00000407967 ATAD2BQ9ULI0 1458 aa28.12■■■□□ 2.09
RNFT2-204ENST00000407967 CSRNP3Q8WYN3 585 aa28.09■■■□□ 2.09
RNFT2-204ENST00000407967 WRNQ14191 1432 aaPredicted RBP eCLIP28.08■■■□□ 2.09
RNFT2-204ENST00000407967 CEP162Q5TB80 1403 aa28.07■■■□□ 2.08
RNFT2-204ENST00000407967 BAZ1BQ9UIG0 1483 aaKnown RBP28.05■■■□□ 2.08
RNFT2-204ENST00000407967 EEA1Q15075 1411 aa28.03■■■□□ 2.08
RNFT2-204ENST00000407967 TNIKQ9UKE5 1360 aa28.01■■■□□ 2.08
RNFT2-204ENST00000407967 UBTFP17480 764 aaKnown RBP28■■■□□ 2.07
RNFT2-204ENST00000407967 TTBK1Q5TCY1 1321 aaPredicted RBP28■■■□□ 2.07
RNFT2-204ENST00000407967 SYNJ1O43426 1573 aa27.98■■■□□ 2.07
RNFT2-204ENST00000407967 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.89■■■□□ 2.05
RNFT2-204ENST00000407967 GOLGA3Q08378 1498 aa27.89■■■□□ 2.05
RNFT2-204ENST00000407967 CCER1Q8TC90 406 aaPredicted RBP27.77■■■□□ 2.04
RNFT2-204ENST00000407967 CEP164Q9UPV0 1460 aa27.73■■■□□ 2.03
RNFT2-204ENST00000407967 HMGXB3Q12766 1538 aa27.72■■■□□ 2.03
RNFT2-204ENST00000407967 NCAPD3P42695 1498 aa27.71■■■□□ 2.03
RNFT2-204ENST00000407967 KIF21BO75037 1637 aa27.7■■■□□ 2.02
RNFT2-204ENST00000407967 PELP1Q8IZL8 1130 aaKnown RBP27.67■■■□□ 2.02
RNFT2-204ENST00000407967 TOP2BQ02880 1626 aa27.61■■■□□ 2.01
RNFT2-204ENST00000407967 RAPGEF2Q9Y4G8 1499 aa27.6■■■□□ 2.01
RNFT2-204ENST00000407967 CLIP1P30622 1438 aa27.58■■■□□ 2.01
RNFT2-204ENST00000407967 RANGAP1P46060 587 aaPredicted RBP27.55■■■□□ 2
RNFT2-204ENST00000407967 BIVM-ERCC5R4GMW8 1640 aa27.52■■■□□ 2
RNFT2-204ENST00000407967 VPS8Q8N3P4 1428 aa27.43■■□□□ 1.98
RNFT2-204ENST00000407967 CUX1P39880 1505 aa27.39■■□□□ 1.98
RNFT2-204ENST00000407967 CFTRP13569 1480 aa27.34■■□□□ 1.97
RNFT2-204ENST00000407967 HNRNPUL2Q1KMD3 747 aaKnown RBP27.32■■□□□ 1.96
RNFT2-204ENST00000407967 APLP2Q06481 763 aa27.32■■□□□ 1.96
RNFT2-204ENST00000407967 PRXQ9BXM0 1461 aa27.3■■□□□ 1.96
RNFT2-204ENST00000407967 SCAF1Q9H7N4 1312 aaKnown RBP27.3■■□□□ 1.96
RNFT2-204ENST00000407967 ERICH3Q5RHP9 1530 aa27.26■■□□□ 1.95
RNFT2-204ENST00000407967 PRDM2Q13029 1718 aa27.21■■□□□ 1.95
RNFT2-204ENST00000407967 KIF27Q86VH2 1401 aa27.21■■□□□ 1.95
RNFT2-204ENST00000407967 ARAP1Q96P48 1450 aa27.16■■□□□ 1.94
RNFT2-204ENST00000407967 DIEXFQ68CQ4 756 aaKnown RBP27.14■■□□□ 1.93
RNFT2-204ENST00000407967 CC2D2AQ9P2K1 1620 aa27.11■■□□□ 1.93
RNFT2-204ENST00000407967 CADPSQ9ULU8 1353 aa27.07■■□□□ 1.92
RNFT2-204ENST00000407967 KANK4Q5T7N3 995 aaPredicted RBP27.04■■□□□ 1.92
RNFT2-204ENST00000407967 CUX2O14529 1486 aa27.01■■□□□ 1.91
RNFT2-204ENST00000407967 ZNF316A6NFI3 1004 aaPredicted RBP26.97■■□□□ 1.91
RNFT2-204ENST00000407967 ARHGAP35Q9NRY4 1499 aa26.95■■□□□ 1.9
RNFT2-204ENST00000407967 IGF1RP08069 1367 aa26.94■■□□□ 1.9
RNFT2-204ENST00000407967 FGD5Q6ZNL6 1462 aa26.93■■□□□ 1.9
RNFT2-204ENST00000407967 CARMIL1Q5VZK9 1371 aa26.83■■□□□ 1.89
RNFT2-204ENST00000407967 NEUROD1Q13562 356 aa26.81■■□□□ 1.88
RNFT2-204ENST00000407967 FANCD2Q9BXW9 1451 aa26.81■■□□□ 1.88
RNFT2-204ENST00000407967 ACIN1Q9UKV3 1341 aaKnown RBP26.8■■□□□ 1.88
RNFT2-204ENST00000407967 RRBP1Q9P2E9 1410 aaKnown RBP26.76■■□□□ 1.87
RNFT2-204ENST00000407967 DHX57Q6P158 1386 aaKnown RBP26.73■■□□□ 1.87
RNFT2-204ENST00000407967 NESP48681 1621 aa26.72■■□□□ 1.87
RNFT2-204ENST00000407967 RAD54L2Q9Y4B4 1467 aa26.7■■□□□ 1.86
RNFT2-204ENST00000407967 DNMBPQ6XZF7 1577 aa26.68■■□□□ 1.86
RNFT2-204ENST00000407967 CCNB3Q8WWL7 1395 aa26.68■■□□□ 1.86
RNFT2-204ENST00000407967 ITGAEP38570 1179 aa26.68■■□□□ 1.86
RNFT2-204ENST00000407967 P3H3Q8IVL6 736 aa26.65■■□□□ 1.86
RNFT2-204ENST00000407967 CENPBP07199 599 aaPredicted RBP26.64■■□□□ 1.86
RNFT2-204ENST00000407967 TOPBP1Q92547 1522 aa26.63■■□□□ 1.85
RNFT2-204ENST00000407967 TIAM1Q13009 1591 aa26.62■■□□□ 1.85
RNFT2-204ENST00000407967 POLA1P09884 1462 aaPredicted RBP26.61■■□□□ 1.85
RNFT2-204ENST00000407967 LAMC3Q9Y6N6 1575 aa26.61■■□□□ 1.85
RNFT2-204ENST00000407967 MIER1Q8N108 512 aa26.59■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms