RNA–Protein interactions for RNA: ENST00000374369.7

GDF5-201, Transcript of growth differentiation factor 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GDF5, Length 2,383 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDF5-201ENST00000374369 NISCHQ9Y2I1 1504 aa34.69■■■■□ 3.14
GDF5-201ENST00000374369 CCDC180Q9P1Z9 1646 aa30.42■■■□□ 2.46
GDF5-201ENST00000374369 ABCC9O60706 1549 aa29.39■■■□□ 2.3
GDF5-201ENST00000374369 ZCCHC6Q5VYS8 1495 aaKnown RBP29.04■■■□□ 2.24
GDF5-201ENST00000374369 DCAF8L2P0C7V8 631 aa28.8■■■□□ 2.2
GDF5-201ENST00000374369 DCAF1Q9Y4B6 1507 aa28.6■■■□□ 2.17
GDF5-201ENST00000374369 SHROOM4Q9ULL8 1493 aa28.51■■■□□ 2.15
GDF5-201ENST00000374369 NACADO15069 1562 aa28.45■■■□□ 2.15
GDF5-201ENST00000374369 MYO15BQ96JP2 1530 aa28.45■■■□□ 2.14
GDF5-201ENST00000374369 RB1CC1Q8TDY2 1594 aa28.34■■■□□ 2.13
GDF5-201ENST00000374369 SCRIBQ14160 1630 aa28.01■■■□□ 2.07
GDF5-201ENST00000374369 HRCP23327 699 aa28■■■□□ 2.07
GDF5-201ENST00000374369 UNC13AQ9UPW8 1703 aa27.89■■■□□ 2.06
GDF5-201ENST00000374369 PELP1Q8IZL8 1130 aaKnown RBP27.72■■■□□ 2.03
GDF5-201ENST00000374369 SUPT5HO00267 1087 aaKnown RBP27.69■■■□□ 2.02
GDF5-201ENST00000374369 BICRAQ9NZM4 1560 aa27.67■■■□□ 2.02
GDF5-201ENST00000374369 PABPN1Q86U42 306 aaKnown RBP eCLIP27.64■■■□□ 2.01
GDF5-201ENST00000374369 PPARGC1BQ86YN6 1023 aaKnown RBP27.11■■□□□ 1.93
GDF5-201ENST00000374369 CECR2Q9BXF3 1484 aa27.11■■□□□ 1.93
GDF5-201ENST00000374369 PCGF6Q9BYE7 350 aa27.05■■□□□ 1.92
GDF5-201ENST00000374369 MROH2BQ7Z745 1585 aa26.85■■□□□ 1.89
GDF5-201ENST00000374369 MYT1Q01538 1121 aa26.82■■□□□ 1.88
GDF5-201ENST00000374369 EIF4G1Q04637 1599 aaKnown RBP26.8■■□□□ 1.88
GDF5-201ENST00000374369 SMARCA4P51532 1647 aa26.78■■□□□ 1.88
GDF5-201ENST00000374369 BAZ1AQ9NRL2 1556 aaPredicted RBP26.76■■□□□ 1.87
GDF5-201ENST00000374369 RSF1Q96T23 1441 aaPredicted RBP26.73■■□□□ 1.87
GDF5-201ENST00000374369 CHIC1Q5VXU3 224 aa26.66■■□□□ 1.86
GDF5-201ENST00000374369 WIZO95785 1651 aa26.59■■□□□ 1.85
GDF5-201ENST00000374369 DNAJC5BQ9UF47 199 aa26.58■■□□□ 1.85
GDF5-201ENST00000374369 SCAF1Q9H7N4 1312 aaKnown RBP26.56■■□□□ 1.84
GDF5-201ENST00000374369 CC2D2AQ9P2K1 1620 aa26.56■■□□□ 1.84
GDF5-201ENST00000374369 ATAD2BQ9ULI0 1458 aa26.49■■□□□ 1.83
GDF5-201ENST00000374369 PEG3Q9GZU2 1588 aa26.45■■□□□ 1.83
GDF5-201ENST00000374369 SMARCA2P51531 1590 aa26.35■■□□□ 1.81
GDF5-201ENST00000374369 ZEB1P37275 1124 aaPredicted RBP26.32■■□□□ 1.8
GDF5-201ENST00000374369 NCAPD3P42695 1498 aa26.32■■□□□ 1.8
GDF5-201ENST00000374369 TRIM26Q12899 539 aaPredicted RBP26.29■■□□□ 1.8
GDF5-201ENST00000374369 BAZ1BQ9UIG0 1483 aaKnown RBP26.25■■□□□ 1.79
GDF5-201ENST00000374369 TOP2AP11388 1531 aaKnown RBP26.21■■□□□ 1.79
GDF5-201ENST00000374369 HMGXB3Q12766 1538 aa26.21■■□□□ 1.79
GDF5-201ENST00000374369 CCDC88BA6NC98 1476 aa26■■□□□ 1.75
GDF5-201ENST00000374369 ACIN1Q9UKV3 1341 aaKnown RBP25.9■■□□□ 1.74
GDF5-201ENST00000374369 TRIM41Q8WV44 630 aa25.88■■□□□ 1.73
GDF5-201ENST00000374369 LOC105371045A0A1W2PR82 267 aa25.85■■□□□ 1.73
GDF5-201ENST00000374369 NEUROD1Q13562 356 aa25.7■■□□□ 1.7
GDF5-201ENST00000374369 NESP48681 1621 aa25.69■■□□□ 1.7
GDF5-201ENST00000374369 CADPSQ9ULU8 1353 aa25.6■■□□□ 1.69
GDF5-201ENST00000374369 CFTRP13569 1480 aa25.6■■□□□ 1.69
GDF5-201ENST00000374369 FAM9AQ8IZU1 332 aaPredicted RBP25.59■■□□□ 1.69
GDF5-201ENST00000374369 GTF3C3Q9Y5Q9 886 aa25.59■■□□□ 1.69
GDF5-201ENST00000374369 CENPBP07199 599 aaPredicted RBP25.56■■□□□ 1.68
GDF5-201ENST00000374369 LAMC3Q9Y6N6 1575 aa25.47■■□□□ 1.67
GDF5-201ENST00000374369 ABCC8Q09428 1581 aa25.41■■□□□ 1.66
GDF5-201ENST00000374369 EHMT2Q96KQ7 1210 aa25.36■■□□□ 1.65
GDF5-201ENST00000374369 PRDM2Q13029 1718 aa25.36■■□□□ 1.65
GDF5-201ENST00000374369 FANCD2Q9BXW9 1451 aa25.33■■□□□ 1.65
GDF5-201ENST00000374369 TTBK1Q5TCY1 1321 aaPredicted RBP25.32■■□□□ 1.64
GDF5-201ENST00000374369 KIF21AQ7Z4S6 1674 aa25.31■■□□□ 1.64
GDF5-201ENST00000374369 PDS5BQ9NTI5 1447 aa25.26■■□□□ 1.63
GDF5-201ENST00000374369 DIEXFQ68CQ4 756 aaKnown RBP25.22■■□□□ 1.63
GDF5-201ENST00000374369 CEP164Q9UPV0 1460 aa25.18■■□□□ 1.62
GDF5-201ENST00000374369 ERCC6Q03468 1493 aa25.13■■□□□ 1.61
GDF5-201ENST00000374369 SYNJ1O43426 1573 aa25.12■■□□□ 1.61
GDF5-201ENST00000374369 CUX1P39880 1505 aa25.12■■□□□ 1.61
GDF5-201ENST00000374369 URB2Q14146 1524 aaKnown RBP25.12■■□□□ 1.61
GDF5-201ENST00000374369 WRNQ14191 1432 aaPredicted RBP eCLIP25.11■■□□□ 1.61
GDF5-201ENST00000374369 SOGA1O94964 1423 aa25.09■■□□□ 1.61
GDF5-201ENST00000374369 THOC2Q8NI27 1593 aaKnown RBP25.04■■□□□ 1.6
GDF5-201ENST00000374369 MRC2Q9UBG0 1479 aa25.02■■□□□ 1.6
GDF5-201ENST00000374369 TOPBP1Q92547 1522 aa25.01■■□□□ 1.59
GDF5-201ENST00000374369 TOP2BQ02880 1626 aa24.98■■□□□ 1.59
GDF5-201ENST00000374369 RUSC2Q8N2Y8 1516 aa24.98■■□□□ 1.59
GDF5-201ENST00000374369 CCER1Q8TC90 406 aaPredicted RBP24.98■■□□□ 1.59
GDF5-201ENST00000374369 DNMBPQ6XZF7 1577 aa24.98■■□□□ 1.59
GDF5-201ENST00000374369 BIVM-ERCC5R4GMW8 1640 aa24.97■■□□□ 1.59
GDF5-201ENST00000374369 WDR62O43379 1518 aa24.94■■□□□ 1.58
GDF5-201ENST00000374369 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.94■■□□□ 1.58
GDF5-201ENST00000374369 CSRNP3Q8WYN3 585 aa24.91■■□□□ 1.58
GDF5-201ENST00000374369 FGD5Q6ZNL6 1462 aa24.89■■□□□ 1.58
GDF5-201ENST00000374369 EEA1Q15075 1411 aa24.87■■□□□ 1.57
GDF5-201ENST00000374369 POLA1P09884 1462 aaPredicted RBP24.87■■□□□ 1.57
GDF5-201ENST00000374369 RAD54L2Q9Y4B4 1467 aa24.83■■□□□ 1.57
GDF5-201ENST00000374369 CUX2O14529 1486 aa24.83■■□□□ 1.56
GDF5-201ENST00000374369 BCL11AQ9H165 835 aa24.74■■□□□ 1.55
GDF5-201ENST00000374369 UBTFP17480 764 aaKnown RBP24.72■■□□□ 1.55
GDF5-201ENST00000374369 TARBP1Q13395 1621 aaKnown RBP24.71■■□□□ 1.55
GDF5-201ENST00000374369 TNIKQ9UKE5 1360 aa24.7■■□□□ 1.54
GDF5-201ENST00000374369 ZNF316A6NFI3 1004 aaPredicted RBP24.7■■□□□ 1.54
GDF5-201ENST00000374369 CEP162Q5TB80 1403 aa24.67■■□□□ 1.54
GDF5-201ENST00000374369 GOLGA3Q08378 1498 aa24.65■■□□□ 1.54
GDF5-201ENST00000374369 ZNF608Q9ULD9 1512 aaPredicted RBP24.65■■□□□ 1.54
GDF5-201ENST00000374369 WDR97A6NE52 1622 aa24.64■■□□□ 1.54
GDF5-201ENST00000374369 YTHDC1Q96MU7 727 aaKnown RBP24.64■■□□□ 1.54
GDF5-201ENST00000374369 ABCA10Q8WWZ4 1543 aa24.63■■□□□ 1.53
GDF5-201ENST00000374369 CLSPNQ9HAW4 1339 aa24.62■■□□□ 1.53
GDF5-201ENST00000374369 ANP32EQ9BTT0 268 aa24.62■■□□□ 1.53
GDF5-201ENST00000374369 TDRD9Q8NDG6 1382 aaKnown RBP24.61■■□□□ 1.53
GDF5-201ENST00000374369 IFT140Q96RY7 1462 aa24.6■■□□□ 1.53
GDF5-201ENST00000374369 AQRO60306 1485 aaKnown RBP eCLIP24.56■■□□□ 1.52
GDF5-201ENST00000374369 KIF21BO75037 1637 aa24.54■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms