Protein–RNA interactions for Protein: Q04839

GFD1, mRNA transport factor GFD1, yeastyeast

Known RBP Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
GFD1Q04839 YBL083CYBL083C 426 nt2.22□□□□□ -2.05
GFD1Q04839 YOR008C-AYOR008C-A 225 nt2.22□□□□□ -2.05
GFD1Q04839 YBR184WYBR184W 1572 nt2.22□□□□□ -2.05
GFD1Q04839 RRP6YOR001W 2202 nt2.22□□□□□ -2.05
GFD1Q04839 RGA1YOR127W 3024 nt2.22□□□□□ -2.05
GFD1Q04839 snR60snR60 104 nt2.21□□□□□ -2.06
GFD1Q04839 YNL114CYNL114C 372 nt2.21□□□□□ -2.06
GFD1Q04839 FKS1YLR342W 5631 nt2.21□□□□□ -2.06
GFD1Q04839 SEC31YDL195W 3822 nt2.21□□□□□ -2.06
GFD1Q04839 GRR1YJR090C 3456 nt2.2□□□□□ -2.06
GFD1Q04839 YER172C-AYER172C-A 381 nt2.2□□□□□ -2.06
GFD1Q04839 YOR015WYOR015W 360 nt2.2□□□□□ -2.06
GFD1Q04839 SCW11YGL028C 1629 nt2.2□□□□□ -2.06
GFD1Q04839 YNL018CYNL018C 1839 nt2.19□□□□□ -2.06
GFD1Q04839 STH1YIL126W 4080 nt2.19□□□□□ -2.06
GFD1Q04839 CRM1YGR218W 3255 nt2.19□□□□□ -2.06
GFD1Q04839 IRR1YIL026C 3453 nt2.19□□□□□ -2.06
GFD1Q04839 YDR286CYDR286C 345 nt2.19□□□□□ -2.06
GFD1Q04839 RPL42BYHR141C 321 nt2.19□□□□□ -2.06
GFD1Q04839 PCC1YKR095W-A 267 nt2.19□□□□□ -2.06
GFD1Q04839 YMR172C-AYMR172C-A 384 nt2.19□□□□□ -2.06
GFD1Q04839 RPL42AYNL162W 321 nt2.19□□□□□ -2.06
GFD1Q04839 YNL198CYNL198C 303 nt2.19□□□□□ -2.06
GFD1Q04839 YPR002C-AYPR002C-A 198 nt2.19□□□□□ -2.06
GFD1Q04839 KAP123YER110C 3342 nt2.19□□□□□ -2.06
GFD1Q04839 YPR097WYPR097W 3222 nt2.18□□□□□ -2.06
GFD1Q04839 SSQ1YLR369W 1974 nt2.18□□□□□ -2.06
GFD1Q04839 YDL118WYDL118W 381 nt2.18□□□□□ -2.06
GFD1Q04839 APQ12YIL040W 417 nt2.18□□□□□ -2.06
GFD1Q04839 INA22YIR024C 651 nt2.18□□□□□ -2.06
GFD1Q04839 YOL155W-AYOL155W-A 135 nt2.18□□□□□ -2.06
GFD1Q04839 NEO1YIL048W 3456 nt2.18□□□□□ -2.06
GFD1Q04839 RAV1YJR033C 4074 nt2.18□□□□□ -2.06
GFD1Q04839 YCK3YER123W 1575 nt2.18□□□□□ -2.06
GFD1Q04839 SMY1YKL079W 1971 nt2.18□□□□□ -2.06
GFD1Q04839 SET2YJL168C 2202 nt2.17□□□□□ -2.06
GFD1Q04839 YGR250CYGR250C 2346 nt2.17□□□□□ -2.06
GFD1Q04839 SSS1YDR086C 243 nt2.17□□□□□ -2.06
GFD1Q04839 YGL007C-AYGL007C-A 87 nt2.17□□□□□ -2.06
GFD1Q04839 PAM16YJL104W 450 nt2.17□□□□□ -2.06
GFD1Q04839 YJL135WYJL135W 318 nt2.17□□□□□ -2.06
GFD1Q04839 PAU8YAL068C 363 nt2.17□□□□□ -2.06
GFD1Q04839 TRX1YLR043C 312 nt2.17□□□□□ -2.06
GFD1Q04839 YMR046W-AYMR046W-A 129 nt2.17□□□□□ -2.06
GFD1Q04839 PAU20YOL161C 363 nt2.17□□□□□ -2.06
GFD1Q04839 IES4YOR189W 351 nt2.17□□□□□ -2.06
GFD1Q04839 EFR3YMR212C 2349 nt2.17□□□□□ -2.06
GFD1Q04839 GYP5YPL249C 2685 nt2.16□□□□□ -2.06
GFD1Q04839 RPH1YER169W 2391 nt2.16□□□□□ -2.06
GFD1Q04839 EMP24YGL200C 612 nt2.16□□□□□ -2.06
GFD1Q04839 YLR146W-AYLR146W-A 189 nt2.16□□□□□ -2.06
GFD1Q04839 VPH1YOR270C 2523 nt2.16□□□□□ -2.06
GFD1Q04839 HSL1YKL101W 4557 nt2.15□□□□□ -2.06
GFD1Q04839 PAU18YLL064C 363 nt2.15□□□□□ -2.07
GFD1Q04839 PAU6YNR076W 363 nt2.15□□□□□ -2.07
GFD1Q04839 YOR302WYOR302W 78 nt2.15□□□□□ -2.07
GFD1Q04839 PLC1YPL268W 2610 nt2.15□□□□□ -2.07
GFD1Q04839 MPT5YGL178W 2580 nt2.14□□□□□ -2.07
GFD1Q04839 CFT2YLR115W 2580 nt2.14□□□□□ -2.07
GFD1Q04839 YCR043CYCR043C 384 nt2.14□□□□□ -2.07
GFD1Q04839 YLR120W-AYLR120W-A 102 nt2.14□□□□□ -2.07
GFD1Q04839 MNL2YLR057W 2550 nt2.14□□□□□ -2.07
GFD1Q04839 PUT3YKL015W 2940 nt2.13□□□□□ -2.07
GFD1Q04839 YDR406W-AYDR406W-A 246 nt2.13□□□□□ -2.07
GFD1Q04839 YLR154W-AYLR154W-A 186 nt2.13□□□□□ -2.07
GFD1Q04839 CYB5YNL111C 363 nt2.13□□□□□ -2.07
GFD1Q04839 MET18YIL128W 3099 nt2.12□□□□□ -2.07
GFD1Q04839 LCD1YDR499W 2244 nt2.12□□□□□ -2.07
GFD1Q04839 snR72snR72 98 nt2.12□□□□□ -2.07
GFD1Q04839 YGL052WYGL052W 306 nt2.12□□□□□ -2.07
GFD1Q04839 YJL197C-AYJL197C-A 282 nt2.12□□□□□ -2.07
GFD1Q04839 YCL023CYCL023C 348 nt2.12□□□□□ -2.07
GFD1Q04839 YCL046WYCL046W 324 nt2.12□□□□□ -2.07
GFD1Q04839 COS111YBR203W 2775 nt2.12□□□□□ -2.07
GFD1Q04839 SLM1YIL105C 2061 nt2.11□□□□□ -2.07
GFD1Q04839 tF(GAA)QtF(GAA)Q 75 nt2.11□□□□□ -2.07
GFD1Q04839 YMR321CYMR321C 318 nt2.11□□□□□ -2.07
GFD1Q04839 CSE2YNR010W 450 nt2.11□□□□□ -2.07
GFD1Q04839 INP2YMR163C 2118 nt2.11□□□□□ -2.07
GFD1Q04839 SNF5YBR289W 2718 nt2.11□□□□□ -2.07
GFD1Q04839 snR55snR55 98 nt2.1□□□□□ -2.07
GFD1Q04839 PAU2YEL049W 363 nt2.1□□□□□ -2.07
GFD1Q04839 GPG1YGL121C 381 nt2.1□□□□□ -2.07
GFD1Q04839 RPS17AYML024W 411 nt2.1□□□□□ -2.07
GFD1Q04839 NUP100YKL068W 2880 nt2.1□□□□□ -2.07
GFD1Q04839 CHC1YGL206C 4962 nt2.1□□□□□ -2.07
GFD1Q04839 SWI5YDR146C 2130 nt2.09□□□□□ -2.07
GFD1Q04839 LYS14YDR034C 2373 nt2.09□□□□□ -2.07
GFD1Q04839 VIK1YPL253C 1944 nt2.09□□□□□ -2.07
GFD1Q04839 RFX1YLR176C 2436 nt2.09□□□□□ -2.07
GFD1Q04839 PFD1YJL179W 330 nt2.09□□□□□ -2.07
GFD1Q04839 YMR307C-AYMR307C-A 195 nt2.09□□□□□ -2.07
GFD1Q04839 YNL028WYNL028W 318 nt2.09□□□□□ -2.07
GFD1Q04839 ELG1YOR144C 2376 nt2.09□□□□□ -2.08
GFD1Q04839 ATG11YPR049C 3537 nt2.09□□□□□ -2.08
GFD1Q04839 GIP3YPL137C 3831 nt2.08□□□□□ -2.08
GFD1Q04839 MUK1YPL070W 1839 nt2.08□□□□□ -2.08
GFD1Q04839 YHR073W-AYHR073W-A 177 nt2.08□□□□□ -2.08
GFD1Q04839 YLR294CYLR294C 330 nt2.08□□□□□ -2.08
GFD1Q04839 MNE1YOR350C 1992 nt2.08□□□□□ -2.08
Retrieved 100 of 7,029 protein–RNA pairs in 40.1 ms