Protein–RNA interactions for Protein: P40343

VPS27, Vacuolar protein sorting-associated protein 27, yeastyeast

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS27P40343 YOR343W-BYOR343W-B 5313 nt2.08□□□□□ -2.08
VPS27P40343 ZRG17YNR039C 1818 nt2.07□□□□□ -2.08
VPS27P40343 MEC1YBR136W 7107 nt2.07□□□□□ -2.08
VPS27P40343 tW(UCA)QtW(UCA)Q 74 nt2.07□□□□□ -2.08
VPS27P40343 NUT2YPR168W 474 nt2.07□□□□□ -2.08
VPS27P40343 MSH5YDL154W 2706 nt2.07□□□□□ -2.08
VPS27P40343 UTP21YLR409C 2820 nt2.07□□□□□ -2.08
VPS27P40343 PAC1YOR269W 1485 nt2.07□□□□□ -2.08
VPS27P40343 YGR250CYGR250C 2346 nt2.06□□□□□ -2.08
VPS27P40343 YMR045CYMR045C 5268 nt2.06□□□□□ -2.08
VPS27P40343 SWI5YDR146C 2130 nt2.06□□□□□ -2.08
VPS27P40343 MSH6YDR097C 3729 nt2.06□□□□□ -2.08
VPS27P40343 FMP23YBR047W 528 nt2.05□□□□□ -2.08
VPS27P40343 SAR1YPL218W 573 nt2.05□□□□□ -2.08
VPS27P40343 SGO1YOR073W 1773 nt2.05□□□□□ -2.08
VPS27P40343 TRM3YDL112W 4311 nt2.05□□□□□ -2.08
VPS27P40343 LYS14YDR034C 2373 nt2.05□□□□□ -2.08
VPS27P40343 ADR1YDR216W 3972 nt2.04□□□□□ -2.08
VPS27P40343 COA6YMR244C-A 315 nt2.04□□□□□ -2.08
VPS27P40343 RKM1YPL208W 1752 nt2.04□□□□□ -2.08
VPS27P40343 YPL225WYPL225W 441 nt2.04□□□□□ -2.08
VPS27P40343 YHL041WYHL041W 450 nt2.03□□□□□ -2.08
VPS27P40343 YAF9YNL107W 681 nt2.03□□□□□ -2.08
VPS27P40343 TIM18YOR297C 579 nt2.03□□□□□ -2.08
VPS27P40343 YBP1YBR216C 2025 nt2.03□□□□□ -2.08
VPS27P40343 EFR3YMR212C 2349 nt2.02□□□□□ -2.09
VPS27P40343 tT(UGU)HtT(UGU)H 72 nt2.02□□□□□ -2.09
VPS27P40343 YHR210CYHR210C 1026 nt2.02□□□□□ -2.09
VPS27P40343 TRX1YLR043C 312 nt2.02□□□□□ -2.09
VPS27P40343 RPL38YLR325C 237 nt2.02□□□□□ -2.09
VPS27P40343 YPL038W-AYPL038W-A 192 nt2.02□□□□□ -2.09
VPS27P40343 YHR214C-BYHR214C-B 5382 nt2.02□□□□□ -2.09
VPS27P40343 CTR9YOL145C 3234 nt2.02□□□□□ -2.09
VPS27P40343 MYO2YOR326W 4725 nt2.02□□□□□ -2.09
VPS27P40343 RFX1YLR176C 2436 nt2.01□□□□□ -2.09
VPS27P40343 RPL31AYDL075W 342 nt2.01□□□□□ -2.09
VPS27P40343 YDR003W-AYDR003W-A 123 nt2.01□□□□□ -2.09
VPS27P40343 YDR102CYDR102C 333 nt2.01□□□□□ -2.09
VPS27P40343 CSN9YDR179C 489 nt2.01□□□□□ -2.09
VPS27P40343 CYC7YEL039C 342 nt2.01□□□□□ -2.09
VPS27P40343 YMR141W-AYMR141W-A 225 nt2.01□□□□□ -2.09
VPS27P40343 YOP1YPR028W 543 nt2.01□□□□□ -2.09
VPS27P40343 SWI6YLR182W 2412 nt2.01□□□□□ -2.09
VPS27P40343 LHS1YKL073W 2646 nt2.01□□□□□ -2.09
VPS27P40343 IRA1YBR140C 9279 nt2.01□□□□□ -2.09
VPS27P40343 MDM20YOL076W 2391 nt2□□□□□ -2.09
VPS27P40343 RLM1YPL089C 2031 nt2□□□□□ -2.09
VPS27P40343 YEL057CYEL057C 702 nt2□□□□□ -2.09
VPS27P40343 YHR007C-AYHR007C-A 216 nt2□□□□□ -2.09
VPS27P40343 RPL40BYKR094C 387 nt2□□□□□ -2.09
VPS27P40343 UPS1YLR193C 528 nt2□□□□□ -2.09
VPS27P40343 ENV11YGR071C 2583 nt1.99□□□□□ -2.09
VPS27P40343 IRE1YHR079C 3348 nt1.99□□□□□ -2.09
VPS27P40343 MVP1YMR004W 1536 nt1.99□□□□□ -2.09
VPS27P40343 UBR2YLR024C 5619 nt1.99□□□□□ -2.09
VPS27P40343 KCS1YDR017C 3153 nt1.98□□□□□ -2.09
VPS27P40343 YLR035C-AYLR035C-A 3468 nt1.98□□□□□ -2.09
VPS27P40343 MAK10YEL053C 2202 nt1.97□□□□□ -2.09
VPS27P40343 YMR230W-AYMR230W-A 189 nt1.97□□□□□ -2.09
VPS27P40343 CAT8YMR280C 4302 nt1.97□□□□□ -2.09
VPS27P40343 YOR019WYOR019W 2193 nt1.96□□□□□ -2.1
VPS27P40343 MUK1YPL070W 1839 nt1.96□□□□□ -2.1
VPS27P40343 RPL35AYDL191W 363 nt1.95□□□□□ -2.1
VPS27P40343 SPO24YPR036W-A 204 nt1.95□□□□□ -2.1
VPS27P40343 RIM20YOR275C 1986 nt1.95□□□□□ -2.1
VPS27P40343 YLL032CYLL032C 2478 nt1.95□□□□□ -2.1
VPS27P40343 SKI3YPR189W 4299 nt1.94□□□□□ -2.1
VPS27P40343 YHL037CYHL037C 402 nt1.94□□□□□ -2.1
VPS27P40343 YKL118WYKL118W 312 nt1.94□□□□□ -2.1
VPS27P40343 YLR255CYLR255C 354 nt1.94□□□□□ -2.1
VPS27P40343 snR51snR51 107 nt1.94□□□□□ -2.1
VPS27P40343 YKL136WYKL136W 399 nt1.93□□□□□ -2.1
VPS27P40343 YML007C-AYML007C-A 111 nt1.93□□□□□ -2.1
VPS27P40343 YMR247W-AYMR247W-A 144 nt1.93□□□□□ -2.1
VPS27P40343 KIP1YBL063W 3336 nt1.93□□□□□ -2.1
VPS27P40343 SLY1YDR189W 2001 nt1.93□□□□□ -2.1
VPS27P40343 HMI1YOL095C 2121 nt1.93□□□□□ -2.1
VPS27P40343 ZIP1YDR285W 2628 nt1.92□□□□□ -2.1
VPS27P40343 YDR183C-AYDR183C-A 258 nt1.92□□□□□ -2.1
VPS27P40343 TAR1YLR154W-C 375 nt1.91□□□□□ -2.1
VPS27P40343 VPS15YBR097W 4365 nt1.91□□□□□ -2.1
VPS27P40343 CTF4YPR135W 2784 nt1.91□□□□□ -2.1
VPS27P40343 YCS4YLR272C 3531 nt1.9□□□□□ -2.1
VPS27P40343 MLH3YPL164C 2148 nt1.9□□□□□ -2.1
VPS27P40343 SBE22YHR103W 2559 nt1.9□□□□□ -2.11
VPS27P40343 PFD1YJL179W 330 nt1.9□□□□□ -2.11
VPS27P40343 INP2YMR163C 2118 nt1.9□□□□□ -2.11
VPS27P40343 SFB2YNL049C 2631 nt1.89□□□□□ -2.11
VPS27P40343 APL2YKL135C 2181 nt1.89□□□□□ -2.11
VPS27P40343 IRC20YLR247C 4671 nt1.89□□□□□ -2.11
VPS27P40343 DCP2YNL118C 2913 nt1.89□□□□□ -2.11
VPS27P40343 NHP2YDL208W 471 nt1.89□□□□□ -2.11
VPS27P40343 YDR169C-AYDR169C-A 150 nt1.89□□□□□ -2.11
VPS27P40343 YER097WYER097W 330 nt1.89□□□□□ -2.11
VPS27P40343 YIL102CYIL102C 306 nt1.89□□□□□ -2.11
VPS27P40343 HTB2YBL002W 396 nt1.89□□□□□ -2.11
VPS27P40343 MON2YNL297C 4911 nt1.89□□□□□ -2.11
VPS27P40343 FRK1YPL141C 2598 nt1.89□□□□□ -2.11
VPS27P40343 NIP100YPL174C 2607 nt1.88□□□□□ -2.11
VPS27P40343 HSL1YKL101W 4557 nt1.88□□□□□ -2.11
Retrieved 100 of 7,029 protein–RNA pairs in 48.3 ms