Protein–RNA interactions for Protein: P34228

SEF1, Putative transcription factor SEF1, yeastyeast

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SEF1P34228 YER172C-AYER172C-A 381 nt1.78□□□□□ -2.12
SEF1P34228 YIL059CYIL059C 366 nt1.78□□□□□ -2.12
SEF1P34228 MRPL31YKL138C 396 nt1.78□□□□□ -2.12
SEF1P34228 YBL012CYBL012C 402 nt1.78□□□□□ -2.12
SEF1P34228 IRC23YOR044W 474 nt1.78□□□□□ -2.12
SEF1P34228 YPR016W-AYPR016W-A 261 nt1.78□□□□□ -2.12
SEF1P34228 LRE1YCL051W 1752 nt1.77□□□□□ -2.13
SEF1P34228 YFR016CYFR016C 3702 nt1.77□□□□□ -2.13
SEF1P34228 YDL240C-AYDL240C-A 138 nt1.77□□□□□ -2.13
SEF1P34228 YAR053WYAR053W 297 nt1.77□□□□□ -2.13
SEF1P34228 RLM1YPL089C 2031 nt1.77□□□□□ -2.13
SEF1P34228 SWI6YLR182W 2412 nt1.77□□□□□ -2.13
SEF1P34228 YNL144CYNL144C 2223 nt1.76□□□□□ -2.13
SEF1P34228 LYS14YDR034C 2373 nt1.76□□□□□ -2.13
SEF1P34228 YDR003W-AYDR003W-A 123 nt1.76□□□□□ -2.13
SEF1P34228 YNL146WYNL146W 303 nt1.76□□□□□ -2.13
SEF1P34228 YNL277W-AYNL277W-A 189 nt1.76□□□□□ -2.13
SEF1P34228 MAK10YEL053C 2202 nt1.76□□□□□ -2.13
SEF1P34228 IRE1YHR079C 3348 nt1.76□□□□□ -2.13
SEF1P34228 EFR3YMR212C 2349 nt1.75□□□□□ -2.13
SEF1P34228 MSH6YDR097C 3729 nt1.75□□□□□ -2.13
SEF1P34228 YHL041WYHL041W 450 nt1.75□□□□□ -2.13
SEF1P34228 YHR210CYHR210C 1026 nt1.75□□□□□ -2.13
SEF1P34228 YJR011CYJR011C 786 nt1.75□□□□□ -2.13
SEF1P34228 YOP1YPR028W 543 nt1.75□□□□□ -2.13
SEF1P34228 NUT2YPR168W 474 nt1.75□□□□□ -2.13
SEF1P34228 PEP1YBL017C 4740 nt1.75□□□□□ -2.13
SEF1P34228 IRC20YLR247C 4671 nt1.75□□□□□ -2.13
SEF1P34228 RFX1YLR176C 2436 nt1.74□□□□□ -2.13
SEF1P34228 PAU3YCR104W 375 nt1.74□□□□□ -2.13
SEF1P34228 CYC7YEL039C 342 nt1.74□□□□□ -2.13
SEF1P34228 RPL40BYKR094C 387 nt1.74□□□□□ -2.13
SEF1P34228 YOR072W-AYOR072W-A 249 nt1.74□□□□□ -2.13
SEF1P34228 LHS1YKL073W 2646 nt1.74□□□□□ -2.13
SEF1P34228 PAC1YOR269W 1485 nt1.74□□□□□ -2.13
SEF1P34228 PKH3YDR466W 2697 nt1.73□□□□□ -2.13
SEF1P34228 MDM20YOL076W 2391 nt1.73□□□□□ -2.13
SEF1P34228 TRX1YLR043C 312 nt1.73□□□□□ -2.13
SEF1P34228 YMR247W-AYMR247W-A 144 nt1.73□□□□□ -2.13
SEF1P34228 BIL1YOR304C-A 231 nt1.72□□□□□ -2.13
SEF1P34228 YMR141W-AYMR141W-A 225 nt1.71□□□□□ -2.14
SEF1P34228 YAF9YNL107W 681 nt1.71□□□□□ -2.14
SEF1P34228 SGO1YOR073W 1773 nt1.71□□□□□ -2.14
SEF1P34228 ZIP1YDR285W 2628 nt1.7□□□□□ -2.14
SEF1P34228 DCP2YNL118C 2913 nt1.7□□□□□ -2.14
SEF1P34228 HMI1YOL095C 2121 nt1.7□□□□□ -2.14
SEF1P34228 UTP21YLR409C 2820 nt1.7□□□□□ -2.14
SEF1P34228 tT(UGU)HtT(UGU)H 72 nt1.7□□□□□ -2.14
SEF1P34228 tW(UCA)QtW(UCA)Q 74 nt1.7□□□□□ -2.14
SEF1P34228 UPS1YLR193C 528 nt1.7□□□□□ -2.14
SEF1P34228 YSY6YBR162W-A 198 nt1.7□□□□□ -2.14
SEF1P34228 CTF4YPR135W 2784 nt1.69□□□□□ -2.14
SEF1P34228 YMR272W-BYMR272W-B 108 nt1.69□□□□□ -2.14
SEF1P34228 SAR1YPL218W 573 nt1.69□□□□□ -2.14
SEF1P34228 FRK1YPL141C 2598 nt1.69□□□□□ -2.14
SEF1P34228 MUK1YPL070W 1839 nt1.68□□□□□ -2.14
SEF1P34228 SLY1YDR189W 2001 nt1.68□□□□□ -2.14
SEF1P34228 ADR1YDR216W 3972 nt1.68□□□□□ -2.14
SEF1P34228 YMR193C-AYMR193C-A 387 nt1.68□□□□□ -2.14
SEF1P34228 TIM18YOR297C 579 nt1.68□□□□□ -2.14
SEF1P34228 MLH3YPL164C 2148 nt1.68□□□□□ -2.14
SEF1P34228 YLL032CYLL032C 2478 nt1.68□□□□□ -2.14
SEF1P34228 HSL1YKL101W 4557 nt1.68□□□□□ -2.14
SEF1P34228 RKM1YPL208W 1752 nt1.67□□□□□ -2.14
SEF1P34228 YLR035C-AYLR035C-A 3468 nt1.67□□□□□ -2.14
SEF1P34228 MVP1YMR004W 1536 nt1.67□□□□□ -2.14
SEF1P34228 YDR102CYDR102C 333 nt1.67□□□□□ -2.14
SEF1P34228 CSN9YDR179C 489 nt1.67□□□□□ -2.14
SEF1P34228 YHL037CYHL037C 402 nt1.67□□□□□ -2.14
SEF1P34228 YKL118WYKL118W 312 nt1.67□□□□□ -2.14
SEF1P34228 RPL38YLR325C 237 nt1.67□□□□□ -2.14
SEF1P34228 ENV11YGR071C 2583 nt1.67□□□□□ -2.14
SEF1P34228 KCS1YDR017C 3153 nt1.67□□□□□ -2.14
SEF1P34228 YGR109W-BYGR109W-B 4644 nt1.66□□□□□ -2.14
SEF1P34228 YBP1YBR216C 2025 nt1.66□□□□□ -2.14
SEF1P34228 RPL31AYDL075W 342 nt1.66□□□□□ -2.14
SEF1P34228 SRP14YDL092W 441 nt1.66□□□□□ -2.14
SEF1P34228 NHP2YDL208W 471 nt1.66□□□□□ -2.14
SEF1P34228 YKL136WYKL136W 399 nt1.66□□□□□ -2.14
SEF1P34228 YOR199WYOR199W 330 nt1.66□□□□□ -2.14
SEF1P34228 YPL038W-AYPL038W-A 192 nt1.66□□□□□ -2.14
SEF1P34228 snR51snR51 107 nt1.66□□□□□ -2.14
SEF1P34228 SKI3YPR189W 4299 nt1.66□□□□□ -2.14
SEF1P34228 YLR422WYLR422W 5799 nt1.66□□□□□ -2.14
SEF1P34228 YER097WYER097W 330 nt1.65□□□□□ -2.15
SEF1P34228 SFB2YNL049C 2631 nt1.65□□□□□ -2.15
SEF1P34228 DGR2YKL121W 2559 nt1.64□□□□□ -2.15
SEF1P34228 MON2YNL297C 4911 nt1.64□□□□□ -2.15
SEF1P34228 RIM20YOR275C 1986 nt1.63□□□□□ -2.15
SEF1P34228 YLR419WYLR419W 4308 nt1.63□□□□□ -2.15
SEF1P34228 YHR007C-AYHR007C-A 216 nt1.63□□□□□ -2.15
SEF1P34228 YML007C-AYML007C-A 111 nt1.63□□□□□ -2.15
SEF1P34228 PIG1YLR273C 1947 nt1.63□□□□□ -2.15
SEF1P34228 TRM3YDL112W 4311 nt1.62□□□□□ -2.15
SEF1P34228 YDR413CYDR413C 576 nt1.62□□□□□ -2.15
SEF1P34228 YMR230W-AYMR230W-A 189 nt1.62□□□□□ -2.15
SEF1P34228 APL2YKL135C 2181 nt1.62□□□□□ -2.15
SEF1P34228 YOR019WYOR019W 2193 nt1.62□□□□□ -2.15
SEF1P34228 INP2YMR163C 2118 nt1.61□□□□□ -2.15
SEF1P34228 NUP192YJL039C 5052 nt1.61□□□□□ -2.15
Retrieved 100 of 7,029 protein–RNA pairs in 8.8 ms