Protein–RNA interactions for Protein: O60832

DKC1, H/ACA ribonucleoprotein complex subunit 4, humanhuman

Known RBP eCLIP

Length 514 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKC1O60832 EXOC7-203ENST00000357231 1924 ntTSL 1 (best)13.57□□□□□ -0.248e-7■■■□□ 17.2
DKC1O60832 EIF4G1-214ENST00000427141 730 ntTSL 513.51□□□□□ -0.253e-6■■■□□ 17.2
DKC1O60832 EXOC7-216ENST00000589210 4751 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.258e-7■■■□□ 17.2
DKC1O60832 UPF3B-204ENST00000619445 1385 ntTSL 5 BASIC13.44□□□□□ -0.268e-7■■■□□ 17.2
DKC1O60832 TAOK2-201ENST00000279394 4246 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.281e-9■■■□□ 17.2
DKC1O60832 MAGED1-201ENST00000326587 2747 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.288e-7■■■□□ 17.2
DKC1O60832 EXOC7-208ENST00000420116 543 ntTSL 413.05□□□□□ -0.328e-7■■■□□ 17.2
DKC1O60832 EIF4G1-228ENST00000456033 694 ntTSL 512.92□□□□□ -0.343e-6■■■□□ 17.2
DKC1O60832 MAGED1-209ENST00000485420 2906 ntTSL 512.77□□□□□ -0.368e-7■■■□□ 17.2
DKC1O60832 MAGED1-203ENST00000375722 2806 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.388e-7■■■□□ 17.2
DKC1O60832 EIF4G1-220ENST00000440448 578 ntTSL 412.43□□□□□ -0.423e-6■■■□□ 17.2
DKC1O60832 MAGED1-202ENST00000375695 2875 ntTSL 1 (best) BASIC12.27□□□□□ -0.458e-7■■■□□ 17.2
DKC1O60832 SLC39A11-217ENST00000584129 747 ntTSL 312.14□□□□□ -0.478e-7■■■□□ 17.2
DKC1O60832 EIF4G1-223ENST00000444134 558 ntTSL 512.11□□□□□ -0.473e-6■■■□□ 17.2
DKC1O60832 EXOC7-201ENST00000332065 4596 ntAPPRIS P3 TSL 2 BASIC12.07□□□□□ -0.488e-7■■■□□ 17.2
DKC1O60832 EXOC7-204ENST00000405068 2958 ntTSL 211.93□□□□□ -0.58e-7■■■□□ 17.2
DKC1O60832 NUP160-206ENST00000528071 4138 ntTSL 511.88□□□□□ -0.518e-7■■■□□ 17.2
DKC1O60832 CHN2-205ENST00000409964 547 ntTSL 411.88□□□□□ -0.512e-12■■■□□ 17.2
DKC1O60832 EXOC7-202ENST00000335146 3519 ntTSL 1 (best) BASIC11.7□□□□□ -0.548e-7■■■□□ 17.2
DKC1O60832 EXOC7-221ENST00000634349 2124 ntTSL 1 (best) BASIC11.35□□□□□ -0.598e-7■■■□□ 17.2
DKC1O60832 MAGED1-210ENST00000494718 5418 ntTSL 211.21□□□□□ -0.618e-7■■■□□ 17.2
DKC1O60832 MAGED1-204ENST00000375772 2701 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.698e-7■■■□□ 17.2
DKC1O60832 UPF3B-201ENST00000276201 2378 ntTSL 1 (best) BASIC10.73□□□□□ -0.698e-7■■■□□ 17.2
DKC1O60832 TNFRSF10C-205ENST00000520607 581 ntTSL 410.66□□□□□ -0.72e-12■■■□□ 17.2
DKC1O60832 SLC39A11-214ENST00000583146 532 ntTSL 510.56□□□□□ -0.728e-7■■■□□ 17.2
DKC1O60832 ABCA1-202ENST00000374736 10494 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.883e-6■■■□□ 17.2
DKC1O60832 SPTLC3-201ENST00000399002 6169 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.98e-7■■■□□ 17.2
DKC1O60832 EXOC7-220ENST00000607838 3353 ntTSL 5 BASIC8.89□□□□□ -0.998e-7■■■□□ 17.2
DKC1O60832 NUP160-209ENST00000530326 4811 ntAPPRIS ALT2 TSL 56.66□□□□□ -1.348e-7■■■□□ 17.2
DKC1O60832 UPF3B-203ENST00000478840 748 ntTSL 35.48□□□□□ -1.538e-7■■■□□ 17.2
DKC1O60832 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC5.08□□□□□ -1.68e-7■■■□□ 17.2
DKC1O60832 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.55□□□□□ -1.682e-12■■■□□ 17.2
DKC1O60832 NPSR1-AS1-203ENST00000428922 510 ntTSL 1 (best)4.93□□□□□ -1.621e-6■■■□□ 17.1
DKC1O60832 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC4.04□□□□□ -1.761e-6■■■□□ 17.1
DKC1O60832 HSPA9-212ENST00000523929 780 ntTSL 415.85■□□□□ 0.137e-16■■■□□ 17.1
DKC1O60832 HSPA9-207ENST00000507097 1796 ntTSL 214.94□□□□□ -0.027e-16■■■□□ 17.1
DKC1O60832 HSPA9-201ENST00000297185 3321 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.67e-16■■■□□ 17.1
DKC1O60832 HSPA9-202ENST00000501917 275 ntTSL 33.13□□□□□ -1.917e-16■■■□□ 17.1
DKC1O60832 SNORD48-201ENST00000364953 64 ntBASIC1.83□□□□□ -2.121e-323■■■□□ 17.1
DKC1O60832 GLYR1-207ENST00000587936 897 ntTSL 515.32■□□□□ 0.045e-6■■■□□ 17
DKC1O60832 GLYR1-212ENST00000591451 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.15e-6■■■□□ 17
DKC1O60832 GLYR1-201ENST00000321919 3772 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.395e-6■■■□□ 17
DKC1O60832 GLYR1-202ENST00000436648 3466 ntTSL 2 BASIC12.26□□□□□ -0.455e-6■■■□□ 17
DKC1O60832 GLYR1-210ENST00000589389 3606 ntTSL 1 (best)11.75□□□□□ -0.535e-6■■■□□ 17
DKC1O60832 GLYR1-209ENST00000588732 3527 ntTSL 1 (best)10.64□□□□□ -0.715e-6■■■□□ 17
DKC1O60832 ASAP1-211ENST00000521075 5406 ntTSL 1 (best)6.8□□□□□ -1.321e-6■■■□□ 17
DKC1O60832 RPS13-207ENST00000531008 594 ntTSL 24.95□□□□□ -1.627e-10■■■□□ 16.9
DKC1O60832 SNORD14A-201ENST00000606526 91 ntBASIC2.65□□□□□ -1.997e-10■■■□□ 16.9
DKC1O60832 SOGA1-201ENST00000237536 14371 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.191e-11■■■□□ 16.9
DKC1O60832 SOGA1-202ENST00000279034 3703 ntAPPRIS P3 TSL 5 BASIC11.6□□□□□ -0.551e-11■■■□□ 16.9
DKC1O60832 PGK1-201ENST00000373316 4887 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.53e-24■■■□□ 16.9
DKC1O60832 PGK1-205ENST00000491291 702 ntTSL 510.05□□□□□ -0.83e-24■■■□□ 16.9
DKC1O60832 EEF2-201ENST00000309311 3164 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.43e-19■■■□□ 16.9
DKC1O60832 AHNAK-208ENST00000533365 584 ntAPPRIS ALT2 TSL 521.63■■□□□ 1.053e-6■■■□□ 16.9
DKC1O60832 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.333e-6■■■□□ 16.9
DKC1O60832 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC15.86■□□□□ 0.133e-6■■■□□ 16.9
DKC1O60832 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.55□□□□□ -1.523e-6■■■□□ 16.9
DKC1O60832 SCARNA18.1-201ENST00000516330 83 ntBASIC6.79□□□□□ -1.321e-323■■■□□ 16.8
DKC1O60832 LINC00843-202ENST00000444438 550 ntTSL 5 BASIC11.4□□□□□ -0.582e-15■■■□□ 16.7
DKC1O60832 ATP11A-209ENST00000466946 431 ntTSL 58.24□□□□□ -1.092e-15■■■□□ 16.7
DKC1O60832 LINC00843-201ENST00000429104 562 ntTSL 57.63□□□□□ -1.192e-15■■■□□ 16.7
DKC1O60832 NDRG1-219ENST00000521544 709 ntTSL 514.44□□□□□ -0.13e-8■■■□□ 16.7
DKC1O60832 NDRG1-215ENST00000520943 536 ntTSL 411.27□□□□□ -0.613e-8■■■□□ 16.7
DKC1O60832 NDRG1-227ENST00000523892 562 ntTSL 49.76□□□□□ -0.853e-8■■■□□ 16.7
DKC1O60832 SNORD10-201ENST00000459579 142 ntBASIC13.52□□□□□ -0.251e-323■■■□□ 16.7
DKC1O60832 EIF4A1-204ENST00000577731 574 ntTSL 23.59□□□□□ -1.831e-323■■■□□ 16.7
DKC1O60832 SNORA3B-201ENST00000391305 131 ntBASIC-0.84□□□□□ -2.541e-323■■■□□ 16.7
DKC1O60832 AC124312.4-201ENST00000605533 310 ntBASIC4.16□□□□□ -1.743e-17■■■□□ 16.7
DKC1O60832 CASP3-204ENST00000447121 549 ntTSL 314.88□□□□□ -0.039e-22■■■□□ 16.6
DKC1O60832 CASP3-205ENST00000517513 964 ntTSL 5 BASIC14.88□□□□□ -0.039e-22■■■□□ 16.6
DKC1O60832 CASP3-202ENST00000393585 2624 ntTSL 1 (best) BASIC11.97□□□□□ -0.499e-22■■■□□ 16.6
DKC1O60832 CASP3-201ENST00000308394 2673 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.529e-22■■■□□ 16.6
DKC1O60832 CASP3-206ENST00000523916 2540 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.689e-22■■■□□ 16.6
DKC1O60832 CASP3-203ENST00000393588 677 ntTSL 4 BASIC2.83□□□□□ -1.969e-22■■■□□ 16.6
DKC1O60832 SNORD12B-201ENST00000410433 91 ntBASIC1.36□□□□□ -2.191e-323■■■□□ 16.6
DKC1O60832 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC19.55■□□□□ 0.721e-7■■■□□ 16.6
DKC1O60832 SOD2-202ENST00000367054 815 ntTSL 2 BASIC15.7■□□□□ 0.11e-7■■■□□ 16.6
DKC1O60832 SOD2-203ENST00000367055 990 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.521e-7■■■□□ 16.6
DKC1O60832 SOD2-216ENST00000546260 4302 ntTSL 511.26□□□□□ -0.611e-7■■■□□ 16.6
DKC1O60832 SOD2-211ENST00000538183 14266 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.121e-7■■■□□ 16.6
DKC1O60832 POR-214ENST00000449920 283 ntTSL 56□□□□□ -1.454e-7■■■□□ 16.6
DKC1O60832 ATP11A-201ENST00000375630 8768 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.147e-8■■■□□ 16.6
DKC1O60832 ATP11A-202ENST00000375645 8795 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.227e-8■■■□□ 16.6
DKC1O60832 ATP11A-212ENST00000487903 8858 ntAPPRIS P2 TSL 5 BASIC11.7□□□□□ -0.547e-8■■■□□ 16.6
DKC1O60832 NOL4L-208ENST00000475781 1127 ntTSL 519■□□□□ 0.631e-7■■■□□ 16.6
DKC1O60832 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.571e-7■■■□□ 16.6
DKC1O60832 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC16.75■□□□□ 0.271e-7■■■□□ 16.6
DKC1O60832 NOL4L-203ENST00000359676 5991 ntTSL 2 BASIC13.69□□□□□ -0.221e-7■■■□□ 16.6
DKC1O60832 NOL4L-204ENST00000375677 541 ntTSL 313.29□□□□□ -0.281e-7■■■□□ 16.6
DKC1O60832 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.31e-323■■■□□ 16.6
DKC1O60832 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.221e-323■■■□□ 16.6
DKC1O60832 CHD4-211ENST00000544484 6554 ntTSL 2 BASIC14.23□□□□□ -0.131e-323■■■□□ 16.6
DKC1O60832 CHD4-205ENST00000536301 107 ntTSL 35.74□□□□□ -1.491e-323■■■□□ 16.6
DKC1O60832 NCL-208ENST00000466274 671 ntTSL 26.39□□□□□ -1.391e-323■■■□□ 16.6
DKC1O60832 SNORD20-201ENST00000384550 80 ntBASIC-2.51□□□□□ -2.811e-323■■■□□ 16.6
DKC1O60832 GAS5-202ENST00000414075 413 ntTSL 2 BASIC6.79□□□□□ -1.327e-48■■■□□ 16.5
DKC1O60832 RPL17-201ENST00000578528 481 ntTSL 326.19■■□□□ 1.786e-42■■■□□ 16.5
DKC1O60832 RPL17-206ENST00000579495 914 ntTSL 221.91■■□□□ 1.16e-42■■■□□ 16.5
DKC1O60832 RPL17-209ENST00000580387 827 ntTSL 519.13■□□□□ 0.656e-42■■■□□ 16.5
DKC1O60832 RPL17-221ENST00000615760 650 ntTSL 318.93■□□□□ 0.626e-42■■■□□ 16.5
Retrieved 100 of 8,567 protein–RNA pairs in 182.1 ms