RNA–Protein interactions for RNA: ENST00000580387.5

RPL17-209, Transcript of ribosomal protein L17, humanhuman

TSL 5

Gene RPL17, Length 827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL17-209ENST00000580387 NISCHQ9Y2I1 1504 aa42.32■■■■■ 4.37
RPL17-209ENST00000580387 CCDC180Q9P1Z9 1646 aa37.92■■■■□ 3.66
RPL17-209ENST00000580387 ABCC9O60706 1549 aa37.71■■■■□ 3.63
RPL17-209ENST00000580387 RB1CC1Q8TDY2 1594 aa36.01■■■■□ 3.35
RPL17-209ENST00000580387 NACADO15069 1562 aa35.78■■■■□ 3.32
RPL17-209ENST00000580387 DCAF8L2P0C7V8 631 aa35.69■■■■□ 3.3
RPL17-209ENST00000580387 MYO15BQ96JP2 1530 aa35.32■■■■□ 3.25
RPL17-209ENST00000580387 UNC13AQ9UPW8 1703 aa35.16■■■■□ 3.22
RPL17-209ENST00000580387 PABPN1Q86U42 306 aaKnown RBP eCLIP35.13■■■■□ 3.21
RPL17-209ENST00000580387 ZCCHC6Q5VYS8 1495 aaKnown RBP35.13■■■■□ 3.21
RPL17-209ENST00000580387 DNAJC5BQ9UF47 199 aa35.07■■■■□ 3.2
RPL17-209ENST00000580387 DCAF1Q9Y4B6 1507 aa34.96■■■■□ 3.19
RPL17-209ENST00000580387 BICRAQ9NZM4 1560 aa34.88■■■■□ 3.17
RPL17-209ENST00000580387 SCRIBQ14160 1630 aa34.6■■■■□ 3.13
RPL17-209ENST00000580387 SHROOM4Q9ULL8 1493 aa34.48■■■■□ 3.11
RPL17-209ENST00000580387 CC2D2AQ9P2K1 1620 aa34.07■■■■□ 3.04
RPL17-209ENST00000580387 EIF4G1Q04637 1599 aaKnown RBP34.06■■■■□ 3.04
RPL17-209ENST00000580387 CECR2Q9BXF3 1484 aa33.95■■■■□ 3.02
RPL17-209ENST00000580387 SMARCA4P51532 1647 aa33■■■□□ 2.87
RPL17-209ENST00000580387 NCAPD3P42695 1498 aa32.99■■■□□ 2.87
RPL17-209ENST00000580387 ATAD2BQ9ULI0 1458 aa32.94■■■□□ 2.86
RPL17-209ENST00000580387 SMARCA2P51531 1590 aa32.91■■■□□ 2.86
RPL17-209ENST00000580387 BAZ1AQ9NRL2 1556 aaPredicted RBP32.87■■■□□ 2.85
RPL17-209ENST00000580387 HMGXB3Q12766 1538 aa32.82■■■□□ 2.84
RPL17-209ENST00000580387 BAZ1BQ9UIG0 1483 aaKnown RBP32.69■■■□□ 2.82
RPL17-209ENST00000580387 PEG3Q9GZU2 1588 aa32.63■■■□□ 2.81
RPL17-209ENST00000580387 MROH2BQ7Z745 1585 aa32.61■■■□□ 2.81
RPL17-209ENST00000580387 ERCC6Q03468 1493 aa32.61■■■□□ 2.81
RPL17-209ENST00000580387 NESP48681 1621 aa32.44■■■□□ 2.78
RPL17-209ENST00000580387 CUX2O14529 1486 aa32.42■■■□□ 2.78
RPL17-209ENST00000580387 LAMC3Q9Y6N6 1575 aa32.27■■■□□ 2.76
RPL17-209ENST00000580387 WIZO95785 1651 aa32.25■■■□□ 2.75
RPL17-209ENST00000580387 DNAJC5Q9H3Z4 198 aa32.09■■■□□ 2.73
RPL17-209ENST00000580387 THOC2Q8NI27 1593 aaKnown RBP32.08■■■□□ 2.73
RPL17-209ENST00000580387 PDS5BQ9NTI5 1447 aa32.08■■■□□ 2.73
RPL17-209ENST00000580387 KIF21AQ7Z4S6 1674 aa32.06■■■□□ 2.72
RPL17-209ENST00000580387 CADPSQ9ULU8 1353 aa32.02■■■□□ 2.72
RPL17-209ENST00000580387 RSF1Q96T23 1441 aaPredicted RBP32■■■□□ 2.71
RPL17-209ENST00000580387 TOP2AP11388 1531 aaKnown RBP31.87■■■□□ 2.69
RPL17-209ENST00000580387 MRC2Q9UBG0 1479 aa31.8■■■□□ 2.68
RPL17-209ENST00000580387 CEP164Q9UPV0 1460 aa31.73■■■□□ 2.67
RPL17-209ENST00000580387 CFTRP13569 1480 aa31.7■■■□□ 2.66
RPL17-209ENST00000580387 WDR62O43379 1518 aa31.7■■■□□ 2.66
RPL17-209ENST00000580387 FANCD2Q9BXW9 1451 aa31.69■■■□□ 2.66
RPL17-209ENST00000580387 CCDC88BA6NC98 1476 aa31.47■■■□□ 2.63
RPL17-209ENST00000580387 PRDM2Q13029 1718 aa31.46■■■□□ 2.63
RPL17-209ENST00000580387 URB2Q14146 1524 aaKnown RBP31.39■■■□□ 2.61
RPL17-209ENST00000580387 TOPBP1Q92547 1522 aa31.1■■■□□ 2.57
RPL17-209ENST00000580387 IFT140Q96RY7 1462 aa31.07■■■□□ 2.56
RPL17-209ENST00000580387 ABCC8Q09428 1581 aa31.06■■■□□ 2.56
RPL17-209ENST00000580387 DNMBPQ6XZF7 1577 aa31.03■■■□□ 2.56
RPL17-209ENST00000580387 ZNF608Q9ULD9 1512 aaPredicted RBP30.97■■■□□ 2.55
RPL17-209ENST00000580387 OSCARQ8IYS5 282 aa30.95■■■□□ 2.55
RPL17-209ENST00000580387 TRIM41Q8WV44 630 aa30.87■■■□□ 2.53
RPL17-209ENST00000580387 EIF4G3O43432 1585 aaKnown RBP30.86■■■□□ 2.53
RPL17-209ENST00000580387 SUPT5HO00267 1087 aaKnown RBP30.8■■■□□ 2.52
RPL17-209ENST00000580387 POLA1P09884 1462 aaPredicted RBP30.8■■■□□ 2.52
RPL17-209ENST00000580387 TARBP1Q13395 1621 aaKnown RBP30.8■■■□□ 2.52
RPL17-209ENST00000580387 AQRO60306 1485 aaKnown RBP eCLIP30.72■■■□□ 2.515e-7■■■■■ 34.9
RPL17-209ENST00000580387 RAD54L2Q9Y4B4 1467 aa30.68■■■□□ 2.5
RPL17-209ENST00000580387 SOGA1O94964 1423 aa30.66■■■□□ 2.5
RPL17-209ENST00000580387 FGD5Q6ZNL6 1462 aa30.65■■■□□ 2.5
RPL17-209ENST00000580387 CUX1P39880 1505 aa30.63■■■□□ 2.49
RPL17-209ENST00000580387 CHD1O14646 1710 aa30.59■■■□□ 2.49
RPL17-209ENST00000580387 TDRD9Q8NDG6 1382 aaKnown RBP30.57■■■□□ 2.48
RPL17-209ENST00000580387 RIMBP3CA6NJZ7 1639 aa30.55■■■□□ 2.48
RPL17-209ENST00000580387 RIMBP3BA6NNM3 1639 aa30.55■■■□□ 2.48
RPL17-209ENST00000580387 RIMBP3Q9UFD9 1639 aa30.55■■■□□ 2.48
RPL17-209ENST00000580387 WDR97A6NE52 1622 aa30.54■■■□□ 2.48
RPL17-209ENST00000580387 FBLN2P98095 1184 aa30.53■■■□□ 2.48
RPL17-209ENST00000580387 ARHGEF11O15085 1522 aa30.47■■■□□ 2.47
RPL17-209ENST00000580387 SNAPC4Q5SXM2 1469 aa30.45■■■□□ 2.47
RPL17-209ENST00000580387 GRIN2BQ13224 1484 aa30.38■■■□□ 2.45
RPL17-209ENST00000580387 MAGI1Q96QZ7 1491 aaPredicted RBP30.37■■■□□ 2.45
RPL17-209ENST00000580387 CHMP7Q8WUX9 453 aaPredicted RBP30.32■■■□□ 2.44
RPL17-209ENST00000580387 PBRM1Q86U86 1689 aa30.32■■■□□ 2.44
RPL17-209ENST00000580387 GAPVD1Q14C86 1478 aa30.31■■■□□ 2.44
RPL17-209ENST00000580387 ABCA10Q8WWZ4 1543 aa30.29■■■□□ 2.44
RPL17-209ENST00000580387 SYNJ2O15056 1496 aa30.26■■■□□ 2.44
RPL17-209ENST00000580387 SYNJ1O43426 1573 aa30.26■■■□□ 2.43
RPL17-209ENST00000580387 ABCA5Q8WWZ7 1642 aa30.25■■■□□ 2.43
RPL17-209ENST00000580387 WRNQ14191 1432 aaPredicted RBP eCLIP30.23■■■□□ 2.435e-6■■■■■ 29.2
RPL17-209ENST00000580387 CYB5RLQ6IPT4 315 aa30.23■■■□□ 2.43
RPL17-209ENST00000580387 TOP2BQ02880 1626 aa30.22■■■□□ 2.43
RPL17-209ENST00000580387 BIVM-ERCC5R4GMW8 1640 aa30.22■■■□□ 2.43
RPL17-209ENST00000580387 CLASP1Q7Z460 1538 aa30.21■■■□□ 2.43
RPL17-209ENST00000580387 ARAP1Q96P48 1450 aa30.18■■■□□ 2.42
RPL17-209ENST00000580387 ADAMTS12P58397 1594 aa30.03■■■□□ 2.4
RPL17-209ENST00000580387 GRIN2AQ12879 1464 aa29.99■■■□□ 2.39
RPL17-209ENST00000580387 ERICH3Q5RHP9 1530 aa29.93■■■□□ 2.38
RPL17-209ENST00000580387 FHAD1B1AJZ9 1412 aa29.93■■■□□ 2.38
RPL17-209ENST00000580387 TRHP20396 242 aaPredicted RBP29.88■■■□□ 2.37
RPL17-209ENST00000580387 CEP170Q5SW79 1584 aa29.87■■■□□ 2.37
RPL17-209ENST00000580387 NUP160Q12769 1436 aa29.86■■■□□ 2.37
RPL17-209ENST00000580387 ERCC6L2Q5T890 1561 aa29.74■■■□□ 2.35
RPL17-209ENST00000580387 SHROOM2Q13796 1616 aa29.71■■■□□ 2.35
RPL17-209ENST00000580387 KIF27Q86VH2 1401 aa29.65■■■□□ 2.34
RPL17-209ENST00000580387 RUSC2Q8N2Y8 1516 aa29.6■■■□□ 2.33
RPL17-209ENST00000580387 CUL7Q14999 1698 aa29.58■■■□□ 2.33
RPL17-209ENST00000580387 PRG4Q92954 1404 aaPredicted RBP29.58■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms