RNA–Protein interactions for RNA: ENST00000418567.1

LINC02542-201, Transcript of long intergenic non-protein coding RNA 2542, humanhuman

TSL 5 BASIC

Gene LINC02542, Length 822 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02542-201ENST00000418567 AEBP2Q6ZN18 517 aaPredicted RBP18.74■□□□□ 0.59
LINC02542-201ENST00000418567 CHIC1Q5VXU3 224 aa17.86■□□□□ 0.45
LINC02542-201ENST00000418567 SENP3Q9H4L4 574 aaPredicted RBP15.92■□□□□ 0.14
LINC02542-201ENST00000418567 PHF23Q9BUL5 403 aaPredicted RBP15.74■□□□□ 0.11
LINC02542-201ENST00000418567 POTEDQ86YR6 584 aa15.43■□□□□ 0.06
LINC02542-201ENST00000418567 FOXD1Q16676 465 aa14.91□□□□□ -0.02
LINC02542-201ENST00000418567 MSH5O43196 834 aa14.33□□□□□ -0.12
LINC02542-201ENST00000418567 PLPPR3Q6T4P5 718 aa14.32□□□□□ -0.12
LINC02542-201ENST00000418567 PPP6R1Q9UPN7 881 aa14.02□□□□□ -0.17
LINC02542-201ENST00000418567 ADRA2BP18089 450 aa14.01□□□□□ -0.17
LINC02542-201ENST00000418567 PIAS4Q8N2W9 510 aaPredicted RBP13.94□□□□□ -0.18
LINC02542-201ENST00000418567 CACNB1Q02641 598 aaPredicted RBP12.84□□□□□ -0.35
LINC02542-201ENST00000418567 MAPK8IP2Q13387 824 aaPredicted RBP12.84□□□□□ -0.35
LINC02542-201ENST00000418567 SCAF1Q9H7N4 1312 aaKnown RBP12.69□□□□□ -0.38
LINC02542-201ENST00000418567 PPP4R3CPQ6ZMV5 832 aa12.62□□□□□ -0.39
LINC02542-201ENST00000418567 DMRT2Q9Y5R5 561 aa12.62□□□□□ -0.39
LINC02542-201ENST00000418567 CNKSR2Q8WXI2 1034 aa12.3□□□□□ -0.44
LINC02542-201ENST00000418567 DCAF8L1A6NGE4 600 aa12.26□□□□□ -0.45
LINC02542-201ENST00000418567 HOXD11P31277 338 aaPredicted RBP12.18□□□□□ -0.46
LINC02542-201ENST00000418567 RNF216Q9NWF9 866 aaPredicted RBP12.14□□□□□ -0.47
LINC02542-201ENST00000418567 NCBP3Q53F19 620 aaKnown RBP12.13□□□□□ -0.47
LINC02542-201ENST00000418567 RNF39Q9H2S5 420 aa12.12□□□□□ -0.47
LINC02542-201ENST00000418567 NPM3O75607 178 aaKnown RBP12□□□□□ -0.49
LINC02542-201ENST00000418567 KCNA4P22459 653 aa11.95□□□□□ -0.5
LINC02542-201ENST00000418567 POTEHQ6S545 545 aa11.94□□□□□ -0.5
LINC02542-201ENST00000418567 C1QBPQ07021 282 aaKnown RBP11.92□□□□□ -0.5
LINC02542-201ENST00000418567 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.72□□□□□ -0.53
LINC02542-201ENST00000418567 DNAJC5BQ9UF47 199 aa11.6□□□□□ -0.55
LINC02542-201ENST00000418567 U3KPZ7 1027 aaPredicted RBP11.46□□□□□ -0.57
LINC02542-201ENST00000418567 SLC4A2P04920 1241 aa11.43□□□□□ -0.58
LINC02542-201ENST00000418567 SPINK5Q9NQ38 1064 aaPredicted RBP11.3□□□□□ -0.6
LINC02542-201ENST00000418567 SLC4A1APQ9BWU0 796 aaKnown RBP11.29□□□□□ -0.6
LINC02542-201ENST00000418567 CAPN15O75808 1086 aa11.28□□□□□ -0.6
LINC02542-201ENST00000418567 TRHP20396 242 aaPredicted RBP11.15□□□□□ -0.62
LINC02542-201ENST00000418567 DSG3P32926 999 aa11.1□□□□□ -0.63
LINC02542-201ENST00000418567 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.09□□□□□ -0.63
LINC02542-201ENST00000418567 HNRNPUL2Q1KMD3 747 aaKnown RBP11.09□□□□□ -0.63
LINC02542-201ENST00000418567 ABCB7O75027 752 aa11.08□□□□□ -0.64
LINC02542-201ENST00000418567 SAMD1Q6SPF0 538 aaPredicted RBP11.07□□□□□ -0.64
LINC02542-201ENST00000418567 MYCNP04198 464 aaPredicted RBP11.06□□□□□ -0.64
LINC02542-201ENST00000418567 APLP2Q06481 763 aa11.05□□□□□ -0.64
LINC02542-201ENST00000418567 FOXD4L1Q9NU39 408 aa11.04□□□□□ -0.64
LINC02542-201ENST00000418567 ZNF219Q9P2Y4 722 aaPredicted RBP11.02□□□□□ -0.65
LINC02542-201ENST00000418567 ZBTB22O15209 634 aa11□□□□□ -0.65
LINC02542-201ENST00000418567 ATF5Q9Y2D1 282 aaPredicted RBP10.89□□□□□ -0.67
LINC02542-201ENST00000418567 POLA2Q14181 598 aa10.83□□□□□ -0.68
LINC02542-201ENST00000418567 SP7Q8TDD2 431 aaPredicted RBP10.78□□□□□ -0.68
LINC02542-201ENST00000418567 CHRDL2Q6WN34 429 aa10.71□□□□□ -0.69
LINC02542-201ENST00000418567 EHMT2Q96KQ7 1210 aa10.65□□□□□ -0.7
LINC02542-201ENST00000418567 RBM42Q9BTD8 480 aaKnown RBP10.62□□□□□ -0.71
LINC02542-201ENST00000418567 ATXN8OSP0DMR3 200 aa10.6□□□□□ -0.71
LINC02542-201ENST00000418567 CSRNP3Q8WYN3 585 aa10.58□□□□□ -0.72
LINC02542-201ENST00000418567 ZBTB12Q9Y330 459 aaPredicted RBP10.53□□□□□ -0.72
LINC02542-201ENST00000418567 OSCARQ8IYS5 282 aa10.52□□□□□ -0.73
LINC02542-201ENST00000418567 FBLN2P98095 1184 aa10.39□□□□□ -0.75
LINC02542-201ENST00000418567 MKRN4PQ13434 485 aaPredicted RBP10.36□□□□□ -0.75
LINC02542-201ENST00000418567 HAX1O00165 279 aa10.35□□□□□ -0.75
LINC02542-201ENST00000418567 AKT1S1Q96B36 256 aa10.34□□□□□ -0.75
LINC02542-201ENST00000418567 REM2Q8IYK8 340 aaPredicted RBP10.3□□□□□ -0.76
LINC02542-201ENST00000418567 PIP4P2Q8N4L2 257 aa10.25□□□□□ -0.77
LINC02542-201ENST00000418567 PLSCR2Q9NRY7 297 aa10.24□□□□□ -0.77
LINC02542-201ENST00000418567 SPDYE2BA6NHP3 402 aa10.23□□□□□ -0.77
LINC02542-201ENST00000418567 SPDYE6P0CI01 402 aa10.23□□□□□ -0.77
LINC02542-201ENST00000418567 SPDYE2Q495Y8 402 aa10.23□□□□□ -0.77
LINC02542-201ENST00000418567 PITPNM1O00562 1244 aa10.21□□□□□ -0.77
LINC02542-201ENST00000418567 ZNF692Q9BU19 519 aaPredicted RBP10.2□□□□□ -0.78
LINC02542-201ENST00000418567 LHX8Q68G74 356 aa10.12□□□□□ -0.79
LINC02542-201ENST00000418567 CLEC11AQ9Y240 323 aa10.12□□□□□ -0.79
LINC02542-201ENST00000418567 SSUH2Q9Y2M2 353 aa10.12□□□□□ -0.79
LINC02542-201ENST00000418567 EVX2Q03828 476 aa10.08□□□□□ -0.8
LINC02542-201ENST00000418567 PABPN1Q86U42 306 aaKnown RBP eCLIP10.08□□□□□ -0.8
LINC02542-201ENST00000418567 FXR2P51116 673 aaKnown RBP eCLIP10.04□□□□□ -0.8
LINC02542-201ENST00000418567 SPDYE1Q8NFV5 336 aaPredicted RBP10.04□□□□□ -0.8
LINC02542-201ENST00000418567 SPDYE4A6NLX3 237 aa9.95□□□□□ -0.82
LINC02542-201ENST00000418567 PRKAR2AP13861 404 aaKnown RBP9.95□□□□□ -0.82
LINC02542-201ENST00000418567 CHADLQ6NUI6 762 aa9.92□□□□□ -0.82
LINC02542-201ENST00000418567 PRR29P0C7W0 189 aa9.91□□□□□ -0.82
LINC02542-201ENST00000418567 GABBR2O75899 941 aa9.84□□□□□ -0.83
LINC02542-201ENST00000418567 C19orf67A6NJJ6 358 aa9.76□□□□□ -0.85
LINC02542-201ENST00000418567 STAG3Q9UJ98 1225 aa9.72□□□□□ -0.85
LINC02542-201ENST00000418567 FARP1Q9Y4F1 1045 aaPredicted RBP9.72□□□□□ -0.85
LINC02542-201ENST00000418567 CREBZFQ9NS37 354 aa9.69□□□□□ -0.86
LINC02542-201ENST00000418567 CD44P16070 742 aaKnown RBP9.65□□□□□ -0.86
LINC02542-201ENST00000418567 FKBP8Q14318 412 aa9.64□□□□□ -0.87
LINC02542-201ENST00000418567 PROM2Q8N271 834 aa9.62□□□□□ -0.87
LINC02542-201ENST00000418567 POTEIP0CG38 1075 aa9.58□□□□□ -0.88
LINC02542-201ENST00000418567 POTEMA6NI47 508 aa9.57□□□□□ -0.88
LINC02542-201ENST00000418567 ZRANB1Q9UGI0 708 aa9.54□□□□□ -0.88
LINC02542-201ENST00000418567 MNX1P50219 401 aaPredicted RBP9.51□□□□□ -0.89
LINC02542-201ENST00000418567 POTEGQ6S5H5 508 aa9.51□□□□□ -0.89
LINC02542-201ENST00000418567 MIER1Q8N108 512 aa9.49□□□□□ -0.89
LINC02542-201ENST00000418567 NPM1P06748 294 aaKnown RBP eCLIP9.48□□□□□ -0.89
LINC02542-201ENST00000418567 PCDH10Q9P2E7 1040 aa9.48□□□□□ -0.89
LINC02542-201ENST00000418567 PHF12Q96QT6 1004 aa9.46□□□□□ -0.9
LINC02542-201ENST00000418567 PAK3O75914 559 aaPredicted RBP9.45□□□□□ -0.9
LINC02542-201ENST00000418567 PLCD3Q8N3E9 789 aa9.45□□□□□ -0.9
LINC02542-201ENST00000418567 ZNF579Q8NAF0 562 aaKnown RBP9.44□□□□□ -0.9
LINC02542-201ENST00000418567 DCBLD2Q96PD2 775 aa9.44□□□□□ -0.9
LINC02542-201ENST00000418567 TSPYL2Q9H2G4 693 aaPredicted RBP9.43□□□□□ -0.9
LINC02542-201ENST00000418567 CLCN6P51797 869 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 101.1 ms