RNA–Protein interactions for RNA: ENST00000393588.8

CASP3-203, Transcript of caspase 3, humanhuman

TSL 4 BASIC

Gene CASP3, Length 677 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP3-203ENST00000393588 AEBP2Q6ZN18 517 aaPredicted RBP28.73■■■□□ 2.19
CASP3-203ENST00000393588 CHIC1Q5VXU3 224 aa27.69■■■□□ 2.02
CASP3-203ENST00000393588 SENP3Q9H4L4 574 aaPredicted RBP24.49■■□□□ 1.51
CASP3-203ENST00000393588 PHF23Q9BUL5 403 aaPredicted RBP24.3■■□□□ 1.48
CASP3-203ENST00000393588 FOXD1Q16676 465 aa22.74■■□□□ 1.23
CASP3-203ENST00000393588 PLPPR3Q6T4P5 718 aa22.32■■□□□ 1.16
CASP3-203ENST00000393588 PPP6R1Q9UPN7 881 aa21.57■■□□□ 1.04
CASP3-203ENST00000393588 ADRA2BP18089 450 aa21.52■■□□□ 1.04
CASP3-203ENST00000393588 PIAS4Q8N2W9 510 aaPredicted RBP21.36■■□□□ 1.01
CASP3-203ENST00000393588 MSH5O43196 834 aa21.16■□□□□ 0.98
CASP3-203ENST00000393588 POTEDQ86YR6 584 aa19.94■□□□□ 0.78
CASP3-203ENST00000393588 SCAF1Q9H7N4 1312 aaKnown RBP19.74■□□□□ 0.75
CASP3-203ENST00000393588 MAPK8IP2Q13387 824 aaPredicted RBP19.64■□□□□ 0.73
CASP3-203ENST00000393588 PPP4R3CPQ6ZMV5 832 aa19.6■□□□□ 0.73
CASP3-203ENST00000393588 DMRT2Q9Y5R5 561 aa19.48■□□□□ 0.71
CASP3-203ENST00000393588 CNKSR2Q8WXI2 1034 aa19.16■□□□□ 0.66
CASP3-203ENST00000393588 NCBP3Q53F19 620 aaKnown RBP19■□□□□ 0.63
CASP3-203ENST00000393588 HOXD11P31277 338 aaPredicted RBP18.91■□□□□ 0.62
CASP3-203ENST00000393588 RNF216Q9NWF9 866 aaPredicted RBP18.89■□□□□ 0.61
CASP3-203ENST00000393588 NPM3O75607 178 aaKnown RBP18.7■□□□□ 0.58
CASP3-203ENST00000393588 KCNA4P22459 653 aa18.69■□□□□ 0.58
CASP3-203ENST00000393588 DCAF8L1A6NGE4 600 aa18.63■□□□□ 0.57
CASP3-203ENST00000393588 DNAJC5BQ9UF47 199 aa18.25■□□□□ 0.51
CASP3-203ENST00000393588 RNF39Q9H2S5 420 aa18.09■□□□□ 0.49
CASP3-203ENST00000393588 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.02■□□□□ 0.48
CASP3-203ENST00000393588 CACNB1Q02641 598 aaPredicted RBP17.89■□□□□ 0.45
CASP3-203ENST00000393588 C1QBPQ07021 282 aaKnown RBP17.86■□□□□ 0.45
CASP3-203ENST00000393588 SLC4A2P04920 1241 aa17.74■□□□□ 0.43
CASP3-203ENST00000393588 SLC4A1APQ9BWU0 796 aaKnown RBP17.74■□□□□ 0.43
CASP3-203ENST00000393588 U3KPZ7 1027 aaPredicted RBP17.68■□□□□ 0.42
CASP3-203ENST00000393588 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.36■□□□□ 0.37
CASP3-203ENST00000393588 HNRNPUL2Q1KMD3 747 aaKnown RBP17.36■□□□□ 0.37
CASP3-203ENST00000393588 FOXD4L1Q9NU39 408 aa17.33■□□□□ 0.36
CASP3-203ENST00000393588 MYCNP04198 464 aaPredicted RBP17.3■□□□□ 0.36
CASP3-203ENST00000393588 SPINK5Q9NQ38 1064 aaPredicted RBP17.29■□□□□ 0.36
CASP3-203ENST00000393588 APLP2Q06481 763 aa17.27■□□□□ 0.36
CASP3-203ENST00000393588 SAMD1Q6SPF0 538 aaPredicted RBP17.27■□□□□ 0.36
CASP3-203ENST00000393588 CAPN15O75808 1086 aa17.25■□□□□ 0.35
CASP3-203ENST00000393588 ZBTB22O15209 634 aa17.19■□□□□ 0.34
CASP3-203ENST00000393588 ZNF219Q9P2Y4 722 aaPredicted RBP17.08■□□□□ 0.32
CASP3-203ENST00000393588 TRHP20396 242 aaPredicted RBP17.07■□□□□ 0.32
CASP3-203ENST00000393588 DSG3P32926 999 aa17.06■□□□□ 0.32
CASP3-203ENST00000393588 ABCB7O75027 752 aa16.87■□□□□ 0.29
CASP3-203ENST00000393588 ATF5Q9Y2D1 282 aaPredicted RBP16.84■□□□□ 0.29
CASP3-203ENST00000393588 ATXN8OSP0DMR3 200 aa16.78■□□□□ 0.28
CASP3-203ENST00000393588 CSRNP3Q8WYN3 585 aa16.76■□□□□ 0.27
CASP3-203ENST00000393588 EHMT2Q96KQ7 1210 aa16.75■□□□□ 0.27
CASP3-203ENST00000393588 POLA2Q14181 598 aa16.71■□□□□ 0.27
CASP3-203ENST00000393588 ZBTB12Q9Y330 459 aaPredicted RBP16.44■□□□□ 0.22
CASP3-203ENST00000393588 RBM42Q9BTD8 480 aaKnown RBP16.29■□□□□ 0.2
CASP3-203ENST00000393588 FBLN2P98095 1184 aa16.19■□□□□ 0.18
CASP3-203ENST00000393588 OSCARQ8IYS5 282 aa16.16■□□□□ 0.18
CASP3-203ENST00000393588 MKRN4PQ13434 485 aaPredicted RBP16.09■□□□□ 0.17
CASP3-203ENST00000393588 AKT1S1Q96B36 256 aa16■□□□□ 0.15
CASP3-203ENST00000393588 SPDYE2BA6NHP3 402 aa15.94■□□□□ 0.14
CASP3-203ENST00000393588 SPDYE6P0CI01 402 aa15.94■□□□□ 0.14
CASP3-203ENST00000393588 SPDYE2Q495Y8 402 aa15.94■□□□□ 0.14
CASP3-203ENST00000393588 REM2Q8IYK8 340 aaPredicted RBP15.84■□□□□ 0.13
CASP3-203ENST00000393588 ZNF692Q9BU19 519 aaPredicted RBP15.81■□□□□ 0.12
CASP3-203ENST00000393588 CHRDL2Q6WN34 429 aa15.77■□□□□ 0.12
CASP3-203ENST00000393588 SSUH2Q9Y2M2 353 aa15.77■□□□□ 0.12
CASP3-203ENST00000393588 POTEHQ6S545 545 aa15.72■□□□□ 0.11
CASP3-203ENST00000393588 PITPNM1O00562 1244 aa15.66■□□□□ 0.1
CASP3-203ENST00000393588 PABPN1Q86U42 306 aaKnown RBP eCLIP15.59■□□□□ 0.09
CASP3-203ENST00000393588 SPDYE1Q8NFV5 336 aaPredicted RBP15.58■□□□□ 0.08
CASP3-203ENST00000393588 SPDYE4A6NLX3 237 aa15.55■□□□□ 0.08
CASP3-203ENST00000393588 CLEC11AQ9Y240 323 aa15.5■□□□□ 0.07
CASP3-203ENST00000393588 PIP4P2Q8N4L2 257 aa15.47■□□□□ 0.07
CASP3-203ENST00000393588 FXR2P51116 673 aaKnown RBP eCLIP15.45■□□□□ 0.06
CASP3-203ENST00000393588 PRR29P0C7W0 189 aa15.32■□□□□ 0.04
CASP3-203ENST00000393588 PRKAR2AP13861 404 aaKnown RBP15.26■□□□□ 0.03
CASP3-203ENST00000393588 STAG3Q9UJ98 1225 aa15.26■□□□□ 0.03
CASP3-203ENST00000393588 PROM2Q8N271 834 aa15.24■□□□□ 0.03
CASP3-203ENST00000393588 FKBP8Q14318 412 aa15.17■□□□□ 0.02
CASP3-203ENST00000393588 CHADLQ6NUI6 762 aa15.14■□□□□ 0.01
CASP3-203ENST00000393588 HAX1O00165 279 aa15.08■□□□□ 0
CASP3-203ENST00000393588 CREBZFQ9NS37 354 aa15.02■□□□□ -0
CASP3-203ENST00000393588 FARP1Q9Y4F1 1045 aaPredicted RBP15□□□□□ -0.01
CASP3-203ENST00000393588 C19orf67A6NJJ6 358 aa14.94□□□□□ -0.02
CASP3-203ENST00000393588 SP7Q8TDD2 431 aaPredicted RBP14.93□□□□□ -0.02
CASP3-203ENST00000393588 EVX2Q03828 476 aa14.9□□□□□ -0.02
CASP3-203ENST00000393588 MNX1P50219 401 aaPredicted RBP14.82□□□□□ -0.04
CASP3-203ENST00000393588 CD44P16070 742 aaKnown RBP14.8□□□□□ -0.04
CASP3-203ENST00000393588 MIER1Q8N108 512 aa14.8□□□□□ -0.04
CASP3-203ENST00000393588 NPM1P06748 294 aaKnown RBP eCLIP14.78□□□□□ -0.04
CASP3-203ENST00000393588 FBXO3Q9UK99 471 aa14.78□□□□□ -0.04
CASP3-203ENST00000393588 PLEKHG5O94827 1062 aa14.77□□□□□ -0.05
CASP3-203ENST00000393588 PLCD3Q8N3E9 789 aa14.72□□□□□ -0.05
CASP3-203ENST00000393588 ZRANB1Q9UGI0 708 aa14.65□□□□□ -0.06
CASP3-203ENST00000393588 PAK3O75914 559 aaPredicted RBP14.64□□□□□ -0.07
CASP3-203ENST00000393588 GABBR2O75899 941 aa14.61□□□□□ -0.07
CASP3-203ENST00000393588 ZBTB47Q9UFB7 747 aaPredicted RBP14.61□□□□□ -0.07
CASP3-203ENST00000393588 ZNF579Q8NAF0 562 aaKnown RBP14.6□□□□□ -0.07
CASP3-203ENST00000393588 VASPP50552 380 aaPredicted RBP14.57□□□□□ -0.08
CASP3-203ENST00000393588 CLCN6P51797 869 aa14.57□□□□□ -0.08
CASP3-203ENST00000393588 TSPYL2Q9H2G4 693 aaPredicted RBP14.5□□□□□ -0.09
CASP3-203ENST00000393588 RASEFQ8IZ41 740 aa14.48□□□□□ -0.09
CASP3-203ENST00000393588 PHF12Q96QT6 1004 aa14.47□□□□□ -0.09
CASP3-203ENST00000393588 NUBP1P53384 320 aa14.45□□□□□ -0.1
CASP3-203ENST00000393588 CCDC61Q9Y6R9 512 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms