RNA–Protein interactions for RNA: ENST00000444438.2

LINC00843-202, long intergenic non-protein coding RNA 843, humanhuman

TSL 5 BASIC

Gene LINC00843, Length 550 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00843-202ENST00000444438 AEBP2Q6ZN18 517 aaPredicted RBP25.65■■□□□ 1.7
LINC00843-202ENST00000444438 NISCHQ9Y2I1 1504 aa24.53■■□□□ 1.52
LINC00843-202ENST00000444438 CHIC1Q5VXU3 224 aa23.81■■□□□ 1.4
LINC00843-202ENST00000444438 CCDC180Q9P1Z9 1646 aa21.85■■□□□ 1.09
LINC00843-202ENST00000444438 SENP3Q9H4L4 574 aaPredicted RBP21.81■■□□□ 1.08
LINC00843-202ENST00000444438 PHF23Q9BUL5 403 aaPredicted RBP21.54■■□□□ 1.04
LINC00843-202ENST00000444438 ABCC9O60706 1549 aa21.38■■□□□ 1.01
LINC00843-202ENST00000444438 RB1CC1Q8TDY2 1594 aa20.62■□□□□ 0.89
LINC00843-202ENST00000444438 NACADO15069 1562 aa20.6■□□□□ 0.89
LINC00843-202ENST00000444438 MYO15BQ96JP2 1530 aa20.52■□□□□ 0.87
LINC00843-202ENST00000444438 DCAF8L2P0C7V8 631 aa20.5■□□□□ 0.87
LINC00843-202ENST00000444438 FOXD1Q16676 465 aa20.49■□□□□ 0.87
LINC00843-202ENST00000444438 ZCCHC6Q5VYS8 1495 aaKnown RBP20.42■□□□□ 0.86
LINC00843-202ENST00000444438 DCAF1Q9Y4B6 1507 aa20.37■□□□□ 0.85
LINC00843-202ENST00000444438 UNC13AQ9UPW8 1703 aa20■□□□□ 0.79
LINC00843-202ENST00000444438 PABPN1Q86U42 306 aaKnown RBP eCLIP19.97■□□□□ 0.79
LINC00843-202ENST00000444438 BICRAQ9NZM4 1560 aa19.91■□□□□ 0.78
LINC00843-202ENST00000444438 SHROOM4Q9ULL8 1493 aa19.88■□□□□ 0.77
LINC00843-202ENST00000444438 SCRIBQ14160 1630 aa19.84■□□□□ 0.77
LINC00843-202ENST00000444438 POTEDQ86YR6 584 aa19.77■□□□□ 0.76
LINC00843-202ENST00000444438 DNAJC5BQ9UF47 199 aa19.66■□□□□ 0.74
LINC00843-202ENST00000444438 EIF4G1Q04637 1599 aaKnown RBP19.43■□□□□ 0.7
LINC00843-202ENST00000444438 CC2D2AQ9P2K1 1620 aa19.35■□□□□ 0.69
LINC00843-202ENST00000444438 CECR2Q9BXF3 1484 aa19.27■□□□□ 0.67
LINC00843-202ENST00000444438 MSH5O43196 834 aa19.25■□□□□ 0.67
LINC00843-202ENST00000444438 BAZ1AQ9NRL2 1556 aaPredicted RBP19.05■□□□□ 0.64
LINC00843-202ENST00000444438 SMARCA4P51532 1647 aa19.02■□□□□ 0.64
LINC00843-202ENST00000444438 NCAPD3P42695 1498 aa19.02■□□□□ 0.63
LINC00843-202ENST00000444438 SMARCA2P51531 1590 aa18.98■□□□□ 0.63
LINC00843-202ENST00000444438 PIAS4Q8N2W9 510 aaPredicted RBP18.97■□□□□ 0.63
LINC00843-202ENST00000444438 ATAD2BQ9ULI0 1458 aa18.97■□□□□ 0.63
LINC00843-202ENST00000444438 HMGXB3Q12766 1538 aa18.9■□□□□ 0.62
LINC00843-202ENST00000444438 PEG3Q9GZU2 1588 aa18.89■□□□□ 0.62
LINC00843-202ENST00000444438 MROH2BQ7Z745 1585 aa18.85■□□□□ 0.61
LINC00843-202ENST00000444438 PPP6R1Q9UPN7 881 aa18.84■□□□□ 0.61
LINC00843-202ENST00000444438 BAZ1BQ9UIG0 1483 aaKnown RBP18.82■□□□□ 0.6
LINC00843-202ENST00000444438 PLPPR3Q6T4P5 718 aa18.74■□□□□ 0.59
LINC00843-202ENST00000444438 ADRA2BP18089 450 aa18.73■□□□□ 0.59
LINC00843-202ENST00000444438 RSF1Q96T23 1441 aaPredicted RBP18.66■□□□□ 0.58
LINC00843-202ENST00000444438 WIZO95785 1651 aa18.61■□□□□ 0.57
LINC00843-202ENST00000444438 LAMC3Q9Y6N6 1575 aa18.51■□□□□ 0.55
LINC00843-202ENST00000444438 ERCC6Q03468 1493 aa18.5■□□□□ 0.55
LINC00843-202ENST00000444438 TOP2AP11388 1531 aaKnown RBP18.49■□□□□ 0.55
LINC00843-202ENST00000444438 CADPSQ9ULU8 1353 aa18.45■□□□□ 0.54
LINC00843-202ENST00000444438 NESP48681 1621 aa18.45■□□□□ 0.54
LINC00843-202ENST00000444438 PDS5BQ9NTI5 1447 aa18.43■□□□□ 0.54
LINC00843-202ENST00000444438 CUX2O14529 1486 aa18.38■□□□□ 0.53
LINC00843-202ENST00000444438 CFTRP13569 1480 aa18.32■□□□□ 0.52
LINC00843-202ENST00000444438 CCDC88BA6NC98 1476 aa18.26■□□□□ 0.51
LINC00843-202ENST00000444438 KIF21AQ7Z4S6 1674 aa18.22■□□□□ 0.51
LINC00843-202ENST00000444438 THOC2Q8NI27 1593 aaKnown RBP18.21■□□□□ 0.51
LINC00843-202ENST00000444438 FANCD2Q9BXW9 1451 aa18.2■□□□□ 0.5
LINC00843-202ENST00000444438 CEP164Q9UPV0 1460 aa18.2■□□□□ 0.5
LINC00843-202ENST00000444438 MRC2Q9UBG0 1479 aa18.19■□□□□ 0.5
LINC00843-202ENST00000444438 WDR62O43379 1518 aa18.11■□□□□ 0.49
LINC00843-202ENST00000444438 PRDM2Q13029 1718 aa18.09■□□□□ 0.49
LINC00843-202ENST00000444438 SUPT5HO00267 1087 aaKnown RBP18.09■□□□□ 0.49
LINC00843-202ENST00000444438 ABCC8Q09428 1581 aa18■□□□□ 0.47
LINC00843-202ENST00000444438 URB2Q14146 1524 aaKnown RBP17.98■□□□□ 0.47
LINC00843-202ENST00000444438 TOPBP1Q92547 1522 aa17.89■□□□□ 0.45
LINC00843-202ENST00000444438 DNAJC5Q9H3Z4 198 aa17.88■□□□□ 0.45
LINC00843-202ENST00000444438 DNMBPQ6XZF7 1577 aa17.87■□□□□ 0.45
LINC00843-202ENST00000444438 IFT140Q96RY7 1462 aa17.84■□□□□ 0.45
LINC00843-202ENST00000444438 POLA1P09884 1462 aaPredicted RBP17.73■□□□□ 0.43
LINC00843-202ENST00000444438 CUX1P39880 1505 aa17.69■□□□□ 0.42
LINC00843-202ENST00000444438 SOGA1O94964 1423 aa17.69■□□□□ 0.42
LINC00843-202ENST00000444438 TARBP1Q13395 1621 aaKnown RBP17.67■□□□□ 0.42
LINC00843-202ENST00000444438 FGD5Q6ZNL6 1462 aa17.67■□□□□ 0.42
LINC00843-202ENST00000444438 ZNF608Q9ULD9 1512 aaPredicted RBP17.67■□□□□ 0.42
LINC00843-202ENST00000444438 WDR97A6NE52 1622 aa17.65■□□□□ 0.42
LINC00843-202ENST00000444438 OSCARQ8IYS5 282 aa17.62■□□□□ 0.41
LINC00843-202ENST00000444438 WRNQ14191 1432 aaPredicted RBP eCLIP17.62■□□□□ 0.41
LINC00843-202ENST00000444438 RAD54L2Q9Y4B4 1467 aa17.62■□□□□ 0.41
LINC00843-202ENST00000444438 EIF4G3O43432 1585 aaKnown RBP17.61■□□□□ 0.41
LINC00843-202ENST00000444438 AQRO60306 1485 aaKnown RBP eCLIP17.59■□□□□ 0.41
LINC00843-202ENST00000444438 TOP2BQ02880 1626 aa17.56■□□□□ 0.4
LINC00843-202ENST00000444438 TDRD9Q8NDG6 1382 aaKnown RBP17.55■□□□□ 0.4
LINC00843-202ENST00000444438 ABCA10Q8WWZ4 1543 aa17.54■□□□□ 0.4
LINC00843-202ENST00000444438 BIVM-ERCC5R4GMW8 1640 aa17.54■□□□□ 0.4
LINC00843-202ENST00000444438 GRIN2BQ13224 1484 aa17.5■□□□□ 0.39
LINC00843-202ENST00000444438 SYNJ1O43426 1573 aa17.49■□□□□ 0.39
LINC00843-202ENST00000444438 GAPVD1Q14C86 1478 aa17.48■□□□□ 0.39
LINC00843-202ENST00000444438 MAGI1Q96QZ7 1491 aaPredicted RBP17.48■□□□□ 0.39
LINC00843-202ENST00000444438 SNAPC4Q5SXM2 1469 aa17.43■□□□□ 0.38
LINC00843-202ENST00000444438 FBLN2P98095 1184 aa17.42■□□□□ 0.38
LINC00843-202ENST00000444438 CHMP7Q8WUX9 453 aaPredicted RBP17.42■□□□□ 0.38
LINC00843-202ENST00000444438 ABCA5Q8WWZ7 1642 aa17.42■□□□□ 0.38
LINC00843-202ENST00000444438 SYNJ2O15056 1496 aa17.39■□□□□ 0.37
LINC00843-202ENST00000444438 MAPK8IP2Q13387 824 aaPredicted RBP17.39■□□□□ 0.37
LINC00843-202ENST00000444438 PBRM1Q86U86 1689 aa17.36■□□□□ 0.37
LINC00843-202ENST00000444438 CHD1O14646 1710 aa17.36■□□□□ 0.37
LINC00843-202ENST00000444438 ERICH3Q5RHP9 1530 aa17.34■□□□□ 0.37
LINC00843-202ENST00000444438 FHAD1B1AJZ9 1412 aa17.3■□□□□ 0.36
LINC00843-202ENST00000444438 KIF27Q86VH2 1401 aa17.29■□□□□ 0.36
LINC00843-202ENST00000444438 DMRT2Q9Y5R5 561 aa17.26■□□□□ 0.35
LINC00843-202ENST00000444438 ADAMTS12P58397 1594 aa17.26■□□□□ 0.35
LINC00843-202ENST00000444438 GRIN2AQ12879 1464 aa17.25■□□□□ 0.35
LINC00843-202ENST00000444438 ARHGEF11O15085 1522 aa17.25■□□□□ 0.35
LINC00843-202ENST00000444438 CLASP1Q7Z460 1538 aa17.24■□□□□ 0.35
LINC00843-202ENST00000444438 RIMBP3CA6NJZ7 1639 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms