Protein–RNA interactions for Protein: Q06159

ATG39, Autophagy-related protein 39, yeastyeast

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
ATG39Q06159 DDR48YMR173W 1293 nt1.05□□□□□ -2.24
ATG39Q06159 SHE9YDR393W 1371 nt1.05□□□□□ -2.24
ATG39Q06159 MVP1YMR004W 1536 nt1.05□□□□□ -2.24
ATG39Q06159 MSN5YDR335W 3675 nt1.04□□□□□ -2.24
ATG39Q06159 MTC7YEL033W 420 nt1.04□□□□□ -2.24
ATG39Q06159 YHR028W-AYHR028W-A 321 nt1.04□□□□□ -2.24
ATG39Q06159 YKL068W-AYKL068W-A 237 nt1.04□□□□□ -2.24
ATG39Q06159 UBX4YMR067C 1251 nt1.04□□□□□ -2.24
ATG39Q06159 YNL114CYNL114C 372 nt1.04□□□□□ -2.24
ATG39Q06159 SVS1YPL163C 783 nt1.04□□□□□ -2.24
ATG39Q06159 YBR121C-AYBR121C-A 159 nt1.04□□□□□ -2.24
ATG39Q06159 MLH3YPL164C 2148 nt1.04□□□□□ -2.24
ATG39Q06159 TRM732YMR259C 4263 nt1.03□□□□□ -2.24
ATG39Q06159 NST1YNL091W 3723 nt1.03□□□□□ -2.24
ATG39Q06159 RPL40BYKR094C 387 nt1.03□□□□□ -2.24
ATG39Q06159 YPR099CYPR099C 357 nt1.03□□□□□ -2.24
ATG39Q06159 SMC4YLR086W 4257 nt1.03□□□□□ -2.24
ATG39Q06159 SPR3YGR059W 1539 nt1.03□□□□□ -2.24
ATG39Q06159 ZRG17YNR039C 1818 nt1.03□□□□□ -2.25
ATG39Q06159 HDA3YPR179C 1968 nt1.03□□□□□ -2.25
ATG39Q06159 APL1YJR005W 2103 nt1.03□□□□□ -2.25
ATG39Q06159 UFD2YDL190C 2886 nt1.02□□□□□ -2.25
ATG39Q06159 ILM1YJR118C 612 nt1.02□□□□□ -2.25
ATG39Q06159 PAN3YKL025C 2040 nt1.02□□□□□ -2.25
ATG39Q06159 NOP15YNL110C 663 nt1.02□□□□□ -2.25
ATG39Q06159 YPR039WYPR039W 336 nt1.02□□□□□ -2.25
ATG39Q06159 SNU56YDR240C 1479 nt1.01□□□□□ -2.25
ATG39Q06159 YDR029WYDR029W 315 nt1.01□□□□□ -2.25
ATG39Q06159 MET32YDR253C 576 nt1.01□□□□□ -2.25
ATG39Q06159 tH(GUG)E1tH(GUG)E1 72 nt1.01□□□□□ -2.25
ATG39Q06159 tH(GUG)E2tH(GUG)E2 72 nt1.01□□□□□ -2.25
ATG39Q06159 tH(GUG)G1tH(GUG)G1 72 nt1.01□□□□□ -2.25
ATG39Q06159 tH(GUG)G2tH(GUG)G2 72 nt1.01□□□□□ -2.25
ATG39Q06159 tH(GUG)HtH(GUG)H 72 nt1.01□□□□□ -2.25
ATG39Q06159 tH(GUG)KtH(GUG)K 72 nt1.01□□□□□ -2.25
ATG39Q06159 tH(GUG)MtH(GUG)M 72 nt1.01□□□□□ -2.25
ATG39Q06159 RRT15YLR162W-A 189 nt1.01□□□□□ -2.25
ATG39Q06159 YOR376WYOR376W 369 nt1.01□□□□□ -2.25
ATG39Q06159 VAM6YDL077C 3150 nt1.01□□□□□ -2.25
ATG39Q06159 YDR509WYDR509W 348 nt1□□□□□ -2.25
ATG39Q06159 AZF1YOR113W 2745 nt0.99□□□□□ -2.25
ATG39Q06159 snR84snR84 550 nt0.99□□□□□ -2.25
ATG39Q06159 TMA22YJR014W 597 nt0.99□□□□□ -2.25
ATG39Q06159 RCN2YOR220W 798 nt0.99□□□□□ -2.25
ATG39Q06159 YBR032WYBR032W 303 nt0.99□□□□□ -2.25
ATG39Q06159 YCS4YLR272C 3531 nt0.98□□□□□ -2.25
ATG39Q06159 MDS3YGL197W 4464 nt0.98□□□□□ -2.25
ATG39Q06159 YDR008CYDR008C 351 nt0.98□□□□□ -2.25
ATG39Q06159 YGL217CYGL217C 342 nt0.98□□□□□ -2.25
ATG39Q06159 RPL34BYIL052C 366 nt0.98□□□□□ -2.25
ATG39Q06159 RPL33BYOR234C 324 nt0.98□□□□□ -2.25
ATG39Q06159 TIM18YOR297C 579 nt0.98□□□□□ -2.25
ATG39Q06159 YGR130CYGR130C 2451 nt0.98□□□□□ -2.25
ATG39Q06159 SWI5YDR146C 2130 nt0.98□□□□□ -2.25
ATG39Q06159 YOR192C-AYOR192C-A 1317 nt0.97□□□□□ -2.25
ATG39Q06159 YDR003W-AYDR003W-A 123 nt0.97□□□□□ -2.25
ATG39Q06159 PAU2YEL049W 363 nt0.97□□□□□ -2.25
ATG39Q06159 YHL009W-AYHL009W-A 1242 nt0.97□□□□□ -2.25
ATG39Q06159 YOP1YPR028W 543 nt0.97□□□□□ -2.25
ATG39Q06159 YBR071WYBR071W 636 nt0.97□□□□□ -2.25
ATG39Q06159 RAD50YNL250W 3939 nt0.97□□□□□ -2.25
ATG39Q06159 YJR029WYJR029W 5268 nt0.97□□□□□ -2.25
ATG39Q06159 YPR137C-BYPR137C-B 5268 nt0.97□□□□□ -2.25
ATG39Q06159 TOF2YKR010C 2316 nt0.97□□□□□ -2.25
ATG39Q06159 SEC5YDR166C 2916 nt0.96□□□□□ -2.26
ATG39Q06159 YDL211CYDL211C 1119 nt0.96□□□□□ -2.26
ATG39Q06159 HUR1YGL168W 333 nt0.96□□□□□ -2.26
ATG39Q06159 YAP3YHL009C 993 nt0.96□□□□□ -2.26
ATG39Q06159 SLX4YLR135W 2247 nt0.96□□□□□ -2.26
ATG39Q06159 ZIP1YDR285W 2628 nt0.95□□□□□ -2.26
ATG39Q06159 NUP188YML103C 4968 nt0.95□□□□□ -2.26
ATG39Q06159 YER135CYER135C 393 nt0.95□□□□□ -2.26
ATG39Q06159 APQ13YJL075C 417 nt0.95□□□□□ -2.26
ATG39Q06159 YOR161W-BYOR161W-B 261 nt0.95□□□□□ -2.26
ATG39Q06159 YPR063CYPR063C 423 nt0.95□□□□□ -2.26
ATG39Q06159 SPO75YLL005C 2607 nt0.95□□□□□ -2.26
ATG39Q06159 IML1YJR138W 4755 nt0.95□□□□□ -2.26
ATG39Q06159 SGO1YOR073W 1773 nt0.94□□□□□ -2.26
ATG39Q06159 RPL9AYGL147C 576 nt0.94□□□□□ -2.26
ATG39Q06159 YGR025WYGR025W 303 nt0.94□□□□□ -2.26
ATG39Q06159 YML003WYML003W 873 nt0.94□□□□□ -2.26
ATG39Q06159 YNR025CYNR025C 360 nt0.94□□□□□ -2.26
ATG39Q06159 snR13snR13 124 nt0.94□□□□□ -2.26
ATG39Q06159 NUT1YGL151W 3399 nt0.94□□□□□ -2.26
ATG39Q06159 MUK1YPL070W 1839 nt0.94□□□□□ -2.26
ATG39Q06159 SPO23YBR250W 1572 nt0.93□□□□□ -2.26
ATG39Q06159 SRP14YDL092W 441 nt0.93□□□□□ -2.26
ATG39Q06159 YER023C-AYER023C-A 213 nt0.93□□□□□ -2.26
ATG39Q06159 tV(UAC)BtV(UAC)B 74 nt0.93□□□□□ -2.26
ATG39Q06159 tV(UAC)DtV(UAC)D 74 nt0.93□□□□□ -2.26
ATG39Q06159 HIT1YJR055W 495 nt0.93□□□□□ -2.26
ATG39Q06159 YLL054CYLL054C 2532 nt0.93□□□□□ -2.26
ATG39Q06159 SPT7YBR081C 3999 nt0.93□□□□□ -2.26
ATG39Q06159 VPS54YDR027C 2670 nt0.92□□□□□ -2.26
ATG39Q06159 GDS1YOR355W 1569 nt0.92□□□□□ -2.26
ATG39Q06159 SWI4YER111C 3282 nt0.92□□□□□ -2.26
ATG39Q06159 MKT1YNL085W 2493 nt0.92□□□□□ -2.26
ATG39Q06159 HMLALPHA2YCL067C 633 nt0.92□□□□□ -2.26
ATG39Q06159 MATALPHA2YCR039C 633 nt0.92□□□□□ -2.26
ATG39Q06159 RTR1YER139C 681 nt0.92□□□□□ -2.26
Retrieved 100 of 7,029 protein–RNA pairs in 70.3 ms