Protein–RNA interactions for Protein: P53973

HDA1, Histone deacetylase HDA1, yeastyeast

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
HDA1P53973 SDC25YLL016W 3147 nt2.7□□□□□ -1.98
HDA1P53973 SRB8YCR081W 4284 nt2.7□□□□□ -1.98
HDA1P53973 VPS16YPL045W 2397 nt2.69□□□□□ -1.98
HDA1P53973 YDR209CYDR209C 414 nt2.69□□□□□ -1.98
HDA1P53973 NOP10YHR072W-A 177 nt2.69□□□□□ -1.98
HDA1P53973 YMR230W-AYMR230W-A 189 nt2.69□□□□□ -1.98
HDA1P53973 YBR184WYBR184W 1572 nt2.69□□□□□ -1.98
HDA1P53973 EFR3YMR212C 2349 nt2.69□□□□□ -1.98
HDA1P53973 SUL1YBR294W 2580 nt2.68□□□□□ -1.98
HDA1P53973 YJL182CYJL182C 318 nt2.68□□□□□ -1.98
HDA1P53973 RIC1YLR039C 3171 nt2.68□□□□□ -1.98
HDA1P53973 SCW11YGL028C 1629 nt2.68□□□□□ -1.98
HDA1P53973 APL5YPL195W 2799 nt2.67□□□□□ -1.98
HDA1P53973 SSN2YDR443C 4263 nt2.67□□□□□ -1.98
HDA1P53973 ACB1YGR037C 264 nt2.67□□□□□ -1.98
HDA1P53973 YOR333CYOR333C 417 nt2.67□□□□□ -1.98
HDA1P53973 NUT2YPR168W 474 nt2.67□□□□□ -1.98
HDA1P53973 COS111YBR203W 2775 nt2.67□□□□□ -1.98
HDA1P53973 SEF1YBL066C 3447 nt2.67□□□□□ -1.98
HDA1P53973 PAM16YJL104W 450 nt2.66□□□□□ -1.98
HDA1P53973 UPS1YLR193C 528 nt2.66□□□□□ -1.98
HDA1P53973 YBT1YLL048C 4986 nt2.66□□□□□ -1.98
HDA1P53973 RGA2YDR379W 3030 nt2.66□□□□□ -1.98
HDA1P53973 PEP3YLR148W 2757 nt2.65□□□□□ -1.99
HDA1P53973 AFI1YOR129C 2682 nt2.65□□□□□ -1.99
HDA1P53973 YAL042C-AYAL042C-A 378 nt2.65□□□□□ -1.99
HDA1P53973 TRX1YLR043C 312 nt2.65□□□□□ -1.99
HDA1P53973 YBR277CYBR277C 402 nt2.65□□□□□ -1.99
HDA1P53973 MVP1YMR004W 1536 nt2.64□□□□□ -1.99
HDA1P53973 YGR151CYGR151C 336 nt2.64□□□□□ -1.99
HDA1P53973 YLR466C-BYLR466C-B 117 nt2.64□□□□□ -1.99
HDA1P53973 YNL028WYNL028W 318 nt2.64□□□□□ -1.99
HDA1P53973 NUM1YDR150W 8247 nt2.64□□□□□ -1.99
HDA1P53973 YIL080WYIL080W 4722 nt2.64□□□□□ -1.99
HDA1P53973 RRP6YOR001W 2202 nt2.64□□□□□ -1.99
HDA1P53973 CRM1YGR218W 3255 nt2.64□□□□□ -1.99
HDA1P53973 INP53YOR109W 3324 nt2.63□□□□□ -1.99
HDA1P53973 CFT2YLR115W 2580 nt2.63□□□□□ -1.99
HDA1P53973 YLR149CYLR149C 2193 nt2.63□□□□□ -1.99
HDA1P53973 VTC1YER072W 390 nt2.63□□□□□ -1.99
HDA1P53973 FLO11YIR019C 4104 nt2.63□□□□□ -1.99
HDA1P53973 SMC6YLR383W 3345 nt2.63□□□□□ -1.99
HDA1P53973 CLN3YAL040C 1743 nt2.62□□□□□ -1.99
HDA1P53973 VPS34YLR240W 2628 nt2.62□□□□□ -1.99
HDA1P53973 ISW1YBR245C 3390 nt2.62□□□□□ -1.99
HDA1P53973 PAU2YEL049W 363 nt2.62□□□□□ -1.99
HDA1P53973 YLR255CYLR255C 354 nt2.62□□□□□ -1.99
HDA1P53973 YMR172C-AYMR172C-A 384 nt2.62□□□□□ -1.99
HDA1P53973 YOR011W-AYOR011W-A 207 nt2.62□□□□□ -1.99
HDA1P53973 YPR002C-AYPR002C-A 198 nt2.62□□□□□ -1.99
HDA1P53973 NPR2YEL062W 1848 nt2.62□□□□□ -1.99
HDA1P53973 GRR1YJR090C 3456 nt2.62□□□□□ -1.99
HDA1P53973 SAP1YER047C 2694 nt2.62□□□□□ -1.99
HDA1P53973 YDR239CYDR239C 2364 nt2.61□□□□□ -1.99
HDA1P53973 CDC27YBL084C 2277 nt2.61□□□□□ -1.99
HDA1P53973 Q0092Q0092 141 nt2.61□□□□□ -1.99
HDA1P53973 GPG1YGL121C 381 nt2.61□□□□□ -1.99
HDA1P53973 PFD1YJL179W 330 nt2.61□□□□□ -1.99
HDA1P53973 YLR146W-AYLR146W-A 189 nt2.61□□□□□ -1.99
HDA1P53973 KTI11YBL071W-A 249 nt2.61□□□□□ -1.99
HDA1P53973 CSE2YNR010W 450 nt2.61□□□□□ -1.99
HDA1P53973 REV3YPL167C 4515 nt2.61□□□□□ -1.99
HDA1P53973 CYR1YJL005W 6081 nt2.61□□□□□ -1.99
HDA1P53973 NOP53YPL146C 1368 nt2.61□□□□□ -1.99
HDA1P53973 HOS4YIL112W 3252 nt2.6□□□□□ -1.99
HDA1P53973 MNL2YLR057W 2550 nt2.6□□□□□ -1.99
HDA1P53973 PDR11YIL013C 4236 nt2.6□□□□□ -1.99
HDA1P53973 LCD1YDR499W 2244 nt2.6□□□□□ -1.99
HDA1P53973 SCH9YHR205W 2475 nt2.6□□□□□ -1.99
HDA1P53973 YGL052WYGL052W 306 nt2.6□□□□□ -1.99
HDA1P53973 YMR141W-AYMR141W-A 225 nt2.6□□□□□ -1.99
HDA1P53973 SVL3YPL032C 2478 nt2.6□□□□□ -1.99
HDA1P53973 NFT1YKR103W 3657 nt2.6□□□□□ -1.99
HDA1P53973 SNC1YAL030W 354 nt2.59□□□□□ -1.99
HDA1P53973 GIS1YDR096W 2685 nt2.59□□□□□ -2
HDA1P53973 TFC3YAL001C 3483 nt2.58□□□□□ -2
HDA1P53973 SWI6YLR182W 2412 nt2.58□□□□□ -2
HDA1P53973 YLL032CYLL032C 2478 nt2.58□□□□□ -2
HDA1P53973 SIR3YLR442C 2937 nt2.58□□□□□ -2
HDA1P53973 YDL185C-AYDL185C-A 228 nt2.58□□□□□ -2
HDA1P53973 RPL42BYHR141C 321 nt2.58□□□□□ -2
HDA1P53973 SGM1YJR134C 2124 nt2.58□□□□□ -2
HDA1P53973 RPL42AYNL162W 321 nt2.58□□□□□ -2
HDA1P53973 YOL160WYOL160W 342 nt2.58□□□□□ -2
HDA1P53973 INP51YIL002C 2841 nt2.58□□□□□ -2
HDA1P53973 YEL043WYEL043W 2871 nt2.58□□□□□ -2
HDA1P53973 TOP2YNL088W 4287 nt2.57□□□□□ -2
HDA1P53973 MUK1YPL070W 1839 nt2.57□□□□□ -2
HDA1P53973 YGR050CYGR050C 357 nt2.57□□□□□ -2
HDA1P53973 ACM1YPL267W 630 nt2.57□□□□□ -2
HDA1P53973 VIK1YPL253C 1944 nt2.57□□□□□ -2
HDA1P53973 SSQ1YLR369W 1974 nt2.57□□□□□ -2
HDA1P53973 HSC82YMR186W 2118 nt2.57□□□□□ -2
HDA1P53973 SMY2YBR172C 2223 nt2.57□□□□□ -2
HDA1P53973 HYP2YEL034W 474 nt2.56□□□□□ -2
HDA1P53973 YLR120W-AYLR120W-A 102 nt2.56□□□□□ -2
HDA1P53973 PXA2YKL188C 2562 nt2.56□□□□□ -2
HDA1P53973 SCD5YOR329C 2619 nt2.56□□□□□ -2
HDA1P53973 AMS1YGL156W 3252 nt2.56□□□□□ -2
HDA1P53973 CSF1YLR087C 8877 nt2.56□□□□□ -2
Retrieved 100 of 7,029 protein–RNA pairs in 31.5 ms