Protein–RNA interactions for Protein: P53540

SPC98, Spindle pole body component SPC98, yeastyeast

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SPC98P53540 MRD1YPR112C 2664 nt2.45□□□□□ -2.02
SPC98P53540 Q0092Q0092 141 nt2.44□□□□□ -2.02
SPC98P53540 KTI11YBL071W-A 249 nt2.44□□□□□ -2.02
SPC98P53540 SSN2YDR443C 4263 nt2.44□□□□□ -2.02
SPC98P53540 SOK2YMR016C 2358 nt2.44□□□□□ -2.02
SPC98P53540 GEA1YJR031C 4227 nt2.43□□□□□ -2.02
SPC98P53540 YDR239CYDR239C 2364 nt2.43□□□□□ -2.02
SPC98P53540 VPS16YPL045W 2397 nt2.43□□□□□ -2.02
SPC98P53540 BFA1YJR053W 1725 nt2.43□□□□□ -2.02
SPC98P53540 ISD11YER048W-A 285 nt2.43□□□□□ -2.02
SPC98P53540 ACB1YGR037C 264 nt2.43□□□□□ -2.02
SPC98P53540 NOP10YHR072W-A 177 nt2.43□□□□□ -2.02
SPC98P53540 SNC2YOR327C 348 nt2.43□□□□□ -2.02
SPC98P53540 NUT2YPR168W 474 nt2.43□□□□□ -2.02
SPC98P53540 YBR277CYBR277C 402 nt2.43□□□□□ -2.02
SPC98P53540 UBP1YDL122W 2430 nt2.42□□□□□ -2.02
SPC98P53540 HOS4YIL112W 3252 nt2.42□□□□□ -2.02
SPC98P53540 FMP16YDR070C 282 nt2.42□□□□□ -2.02
SPC98P53540 YGR050CYGR050C 357 nt2.42□□□□□ -2.02
SPC98P53540 RPA34YJL148W 702 nt2.42□□□□□ -2.02
SPC98P53540 ATP7YKL016C 525 nt2.42□□□□□ -2.02
SPC98P53540 YLR255CYLR255C 354 nt2.42□□□□□ -2.02
SPC98P53540 YMR230W-AYMR230W-A 189 nt2.42□□□□□ -2.02
SPC98P53540 ALK2YBL009W 2031 nt2.42□□□□□ -2.02
SPC98P53540 SCW11YGL028C 1629 nt2.42□□□□□ -2.02
SPC98P53540 PSD2YGR170W 3417 nt2.42□□□□□ -2.02
SPC98P53540 TAE2YPL009C 3117 nt2.41□□□□□ -2.02
SPC98P53540 YML007C-AYML007C-A 111 nt2.41□□□□□ -2.02
SPC98P53540 YOR333CYOR333C 417 nt2.41□□□□□ -2.02
SPC98P53540 AMS1YGL156W 3252 nt2.41□□□□□ -2.02
SPC98P53540 MVP1YMR004W 1536 nt2.41□□□□□ -2.02
SPC98P53540 YKU80YMR106C 1890 nt2.41□□□□□ -2.02
SPC98P53540 SCD5YOR329C 2619 nt2.4□□□□□ -2.02
SPC98P53540 TOP2YNL088W 4287 nt2.4□□□□□ -2.02
SPC98P53540 HDA3YPR179C 1968 nt2.4□□□□□ -2.02
SPC98P53540 SUL1YBR294W 2580 nt2.4□□□□□ -2.02
SPC98P53540 snR55snR55 98 nt2.4□□□□□ -2.03
SPC98P53540 PFD1YJL179W 330 nt2.4□□□□□ -2.03
SPC98P53540 PCC1YKR095W-A 267 nt2.4□□□□□ -2.03
SPC98P53540 UPS1YLR193C 528 nt2.4□□□□□ -2.03
SPC98P53540 YLR466C-BYLR466C-B 117 nt2.4□□□□□ -2.03
SPC98P53540 YMR194C-AYMR194C-A 225 nt2.4□□□□□ -2.03
SPC98P53540 ACM1YPL267W 630 nt2.4□□□□□ -2.03
SPC98P53540 VMA9YCL005W-A 222 nt2.4□□□□□ -2.03
SPC98P53540 MLH1YMR167W 2310 nt2.4□□□□□ -2.03
SPC98P53540 SSQ1YLR369W 1974 nt2.4□□□□□ -2.03
SPC98P53540 YIL080WYIL080W 4722 nt2.39□□□□□ -2.03
SPC98P53540 snR60snR60 104 nt2.39□□□□□ -2.03
SPC98P53540 GPG1YGL121C 381 nt2.39□□□□□ -2.03
SPC98P53540 CYB5YNL111C 363 nt2.39□□□□□ -2.03
SPC98P53540 YOR302WYOR302W 78 nt2.39□□□□□ -2.03
SPC98P53540 ISW1YBR245C 3390 nt2.39□□□□□ -2.03
SPC98P53540 YGR250CYGR250C 2346 nt2.39□□□□□ -2.03
SPC98P53540 ATG11YPR049C 3537 nt2.38□□□□□ -2.03
SPC98P53540 MMS22YLR320W 4365 nt2.38□□□□□ -2.03
SPC98P53540 TRX1YLR043C 312 nt2.38□□□□□ -2.03
SPC98P53540 YBR224WYBR224W 516 nt2.38□□□□□ -2.03
SPC98P53540 SMY2YBR172C 2223 nt2.38□□□□□ -2.03
SPC98P53540 INP51YIL002C 2841 nt2.37□□□□□ -2.03
SPC98P53540 SAP190YKR028W 3102 nt2.37□□□□□ -2.03
SPC98P53540 PEX8YGR077C 1770 nt2.37□□□□□ -2.03
SPC98P53540 YDR426CYDR426C 378 nt2.37□□□□□ -2.03
SPC98P53540 tF(GAA)QtF(GAA)Q 75 nt2.37□□□□□ -2.03
SPC98P53540 HYP2YEL034W 474 nt2.37□□□□□ -2.03
SPC98P53540 YJL197C-AYJL197C-A 282 nt2.37□□□□□ -2.03
SPC98P53540 YOR011W-AYOR011W-A 207 nt2.37□□□□□ -2.03
SPC98P53540 INP53YOR109W 3324 nt2.37□□□□□ -2.03
SPC98P53540 RRP6YOR001W 2202 nt2.36□□□□□ -2.03
SPC98P53540 SEF1YBL066C 3447 nt2.36□□□□□ -2.03
SPC98P53540 YGR151CYGR151C 336 nt2.36□□□□□ -2.03
SPC98P53540 YLR120W-AYLR120W-A 102 nt2.36□□□□□ -2.03
SPC98P53540 YOL160WYOL160W 342 nt2.36□□□□□ -2.03
SPC98P53540 PUT3YKL015W 2940 nt2.36□□□□□ -2.03
SPC98P53540 HSC82YMR186W 2118 nt2.36□□□□□ -2.03
SPC98P53540 NOP53YPL146C 1368 nt2.36□□□□□ -2.03
SPC98P53540 SPO22YIL073C 2928 nt2.35□□□□□ -2.03
SPC98P53540 YLR149CYLR149C 2193 nt2.35□□□□□ -2.03
SPC98P53540 PAU2YEL049W 363 nt2.35□□□□□ -2.03
SPC98P53540 YGL052WYGL052W 306 nt2.35□□□□□ -2.03
SPC98P53540 SNC1YAL030W 354 nt2.35□□□□□ -2.03
SPC98P53540 YMR141W-AYMR141W-A 225 nt2.35□□□□□ -2.03
SPC98P53540 YOR015WYOR015W 360 nt2.35□□□□□ -2.03
SPC98P53540 YNL018CYNL018C 1839 nt2.35□□□□□ -2.03
SPC98P53540 SGM1YJR134C 2124 nt2.35□□□□□ -2.03
SPC98P53540 ORC2YBR060C 1863 nt2.35□□□□□ -2.03
SPC98P53540 LCD1YDR499W 2244 nt2.34□□□□□ -2.03
SPC98P53540 YPR002C-AYPR002C-A 198 nt2.34□□□□□ -2.03
SPC98P53540 CBF2YGR140W 2871 nt2.33□□□□□ -2.04
SPC98P53540 YNL028WYNL028W 318 nt2.33□□□□□ -2.04
SPC98P53540 CSE2YNR010W 450 nt2.33□□□□□ -2.04
SPC98P53540 SVL3YPL032C 2478 nt2.33□□□□□ -2.04
SPC98P53540 CLN3YAL040C 1743 nt2.33□□□□□ -2.04
SPC98P53540 CSF1YLR087C 8877 nt2.33□□□□□ -2.04
SPC98P53540 STB4YMR019W 2850 nt2.32□□□□□ -2.04
SPC98P53540 CDC27YBL084C 2277 nt2.32□□□□□ -2.04
SPC98P53540 YDL185C-AYDL185C-A 228 nt2.32□□□□□ -2.04
SPC98P53540 YBL008W-AYBL008W-A 240 nt2.32□□□□□ -2.04
SPC98P53540 YMR321CYMR321C 318 nt2.32□□□□□ -2.04
SPC98P53540 KAP123YER110C 3342 nt2.32□□□□□ -2.04
SPC98P53540 EFR3YMR212C 2349 nt2.32□□□□□ -2.04
Retrieved 100 of 7,029 protein–RNA pairs in 19.2 ms