Protein–RNA interactions for Protein: P38789

SSF1, Ribosome biogenesis protein SSF1, yeastyeast

Predicted RBP Predictions only

Length 453 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSF1P38789 snR43snR43 209 nt3.14□□□□□ -1.91
SSF1P38789 CFT2YLR115W 2580 nt3.14□□□□□ -1.91
SSF1P38789 CYR1YJL005W 6081 nt3.14□□□□□ -1.91
SSF1P38789 PXA2YKL188C 2562 nt3.13□□□□□ -1.91
SSF1P38789 NOP53YPL146C 1368 nt3.13□□□□□ -1.91
SSF1P38789 NUP100YKL068W 2880 nt3.13□□□□□ -1.91
SSF1P38789 FKS3YMR306W 5358 nt3.12□□□□□ -1.91
SSF1P38789 YDR406W-AYDR406W-A 246 nt3.12□□□□□ -1.91
SSF1P38789 ABF2YMR072W 552 nt3.12□□□□□ -1.91
SSF1P38789 EDS1YBR033W 2760 nt3.12□□□□□ -1.91
SSF1P38789 MCD1YDL003W 1701 nt3.12□□□□□ -1.91
SSF1P38789 RPH1YER169W 2391 nt3.12□□□□□ -1.91
SSF1P38789 ECM29YHL030W 5607 nt3.12□□□□□ -1.91
SSF1P38789 MUK1YPL070W 1839 nt3.12□□□□□ -1.91
SSF1P38789 PDR1YGL013C 3207 nt3.12□□□□□ -1.91
SSF1P38789 HCS1YKL017C 2052 nt3.12□□□□□ -1.91
SSF1P38789 YDR239CYDR239C 2364 nt3.11□□□□□ -1.91
SSF1P38789 MMS1YPR164W 4224 nt3.11□□□□□ -1.91
SSF1P38789 SWR1YDR334W 4545 nt3.11□□□□□ -1.91
SSF1P38789 VTC3YPL019C 2508 nt3.11□□□□□ -1.91
SSF1P38789 YLR255CYLR255C 354 nt3.11□□□□□ -1.91
SSF1P38789 PRP8YHR165C 7242 nt3.1□□□□□ -1.91
SSF1P38789 snR60snR60 104 nt3.1□□□□□ -1.91
SSF1P38789 YDR286CYDR286C 345 nt3.1□□□□□ -1.91
SSF1P38789 PNC1YGL037C 651 nt3.1□□□□□ -1.91
SSF1P38789 YHR032W-AYHR032W-A 180 nt3.1□□□□□ -1.91
SSF1P38789 YBR064WYBR064W 429 nt3.1□□□□□ -1.91
SSF1P38789 SCW11YGL028C 1629 nt3.1□□□□□ -1.91
SSF1P38789 MVP1YMR004W 1536 nt3.09□□□□□ -1.91
SSF1P38789 NEW1YPL226W 3591 nt3.09□□□□□ -1.91
SSF1P38789 CYB5YNL111C 363 nt3.09□□□□□ -1.91
SSF1P38789 ACM1YPL267W 630 nt3.09□□□□□ -1.91
SSF1P38789 SLY1YDR189W 2001 nt3.09□□□□□ -1.92
SSF1P38789 VMR1YHL035C 4779 nt3.08□□□□□ -1.92
SSF1P38789 MOT1YPL082C 5604 nt3.08□□□□□ -1.92
SSF1P38789 SEC7YDR170C 6030 nt3.08□□□□□ -1.92
SSF1P38789 SWI5YDR146C 2130 nt3.07□□□□□ -1.92
SSF1P38789 INP2YMR163C 2118 nt3.07□□□□□ -1.92
SSF1P38789 SMC6YLR383W 3345 nt3.07□□□□□ -1.92
SSF1P38789 snR55snR55 98 nt3.07□□□□□ -1.92
SSF1P38789 SSQ1YLR369W 1974 nt3.07□□□□□ -1.92
SSF1P38789 LCD1YDR499W 2244 nt3.07□□□□□ -1.92
SSF1P38789 MET18YIL128W 3099 nt3.06□□□□□ -1.92
SSF1P38789 YCR043CYCR043C 384 nt3.06□□□□□ -1.92
SSF1P38789 NAB6YML117W 3405 nt3.06□□□□□ -1.92
SSF1P38789 YOR225WYOR225W 330 nt3.06□□□□□ -1.92
SSF1P38789 PFF1YBR074W 2931 nt3.06□□□□□ -1.92
SSF1P38789 HYP2YEL034W 474 nt3.05□□□□□ -1.92
SSF1P38789 YGL041CYGL041C 204 nt3.05□□□□□ -1.92
SSF1P38789 YMR230W-AYMR230W-A 189 nt3.05□□□□□ -1.92
SSF1P38789 YNL028WYNL028W 318 nt3.05□□□□□ -1.92
SSF1P38789 RFX1YLR176C 2436 nt3.04□□□□□ -1.92
SSF1P38789 SGM1YJR134C 2124 nt3.04□□□□□ -1.92
SSF1P38789 EMP24YGL200C 612 nt3.04□□□□□ -1.92
SSF1P38789 VPS8YAL002W 3825 nt3.04□□□□□ -1.92
SSF1P38789 PLC1YPL268W 2610 nt3.04□□□□□ -1.92
SSF1P38789 MNE1YOR350C 1992 nt3.03□□□□□ -1.92
SSF1P38789 YDR098C-BYDR098C-B 5268 nt3.03□□□□□ -1.92
SSF1P38789 YDR210C-DYDR210C-D 5268 nt3.03□□□□□ -1.92
SSF1P38789 YDR316W-BYDR316W-B 5268 nt3.03□□□□□ -1.92
SSF1P38789 YDR365W-BYDR365W-B 5268 nt3.03□□□□□ -1.92
SSF1P38789 YER138CYER138C 5268 nt3.03□□□□□ -1.92
SSF1P38789 YER160CYER160C 5268 nt3.03□□□□□ -1.92
SSF1P38789 YGR038C-BYGR038C-B 5268 nt3.03□□□□□ -1.92
SSF1P38789 YGR161C-DYGR161C-D 5268 nt3.03□□□□□ -1.92
SSF1P38789 YJR027WYJR027W 5268 nt3.03□□□□□ -1.92
SSF1P38789 YLR157C-BYLR157C-B 5268 nt3.03□□□□□ -1.92
SSF1P38789 YML039WYML039W 5268 nt3.03□□□□□ -1.92
SSF1P38789 YML045WYML045W 5268 nt3.03□□□□□ -1.92
SSF1P38789 YMR050CYMR050C 5268 nt3.03□□□□□ -1.92
SSF1P38789 YOL103W-BYOL103W-B 5268 nt3.03□□□□□ -1.92
SSF1P38789 YBR012W-BYBR012W-B 5271 nt3.03□□□□□ -1.92
SSF1P38789 YOR142W-BYOR142W-B 5268 nt3.03□□□□□ -1.92
SSF1P38789 YPL257W-BYPL257W-B 5268 nt3.03□□□□□ -1.92
SSF1P38789 YPR158W-BYPR158W-B 5271 nt3.03□□□□□ -1.92
SSF1P38789 YCR102W-AYCR102W-A 198 nt3.03□□□□□ -1.92
SSF1P38789 YOR394C-AYOR394C-A 168 nt3.03□□□□□ -1.92
SSF1P38789 TOM1YDR457W 9807 nt3.02□□□□□ -1.93
SSF1P38789 YDR209CYDR209C 414 nt3.02□□□□□ -1.93
SSF1P38789 YMR141W-AYMR141W-A 225 nt3.02□□□□□ -1.93
SSF1P38789 YMR172C-AYMR172C-A 384 nt3.02□□□□□ -1.93
SSF1P38789 PSD2YGR170W 3417 nt3.02□□□□□ -1.93
SSF1P38789 ESC1YMR219W 4977 nt3.02□□□□□ -1.93
SSF1P38789 ESL1YIL151C 3357 nt3.01□□□□□ -1.93
SSF1P38789 FLO11YIR019C 4104 nt3.01□□□□□ -1.93
SSF1P38789 YMR307C-AYMR307C-A 195 nt3.01□□□□□ -1.93
SSF1P38789 CSE2YNR010W 450 nt3.01□□□□□ -1.93
SSF1P38789 RPB10YOR210W 213 nt3.01□□□□□ -1.93
SSF1P38789 SRO77YBL106C 3033 nt3□□□□□ -1.93
SSF1P38789 YHR086W-AYHR086W-A 162 nt3□□□□□ -1.93
SSF1P38789 SLH1YGR271W 5904 nt2.99□□□□□ -1.93
SSF1P38789 YHR073W-AYHR073W-A 177 nt2.99□□□□□ -1.93
SSF1P38789 PAU8YAL068C 363 nt2.99□□□□□ -1.93
SSF1P38789 PAU20YOL161C 363 nt2.99□□□□□ -1.93
SSF1P38789 TFC8YPL007C 1767 nt2.99□□□□□ -1.93
SSF1P38789 SGS1YMR190C 4344 nt2.99□□□□□ -1.93
SSF1P38789 PHO2YDL106C 1680 nt2.98□□□□□ -1.93
SSF1P38789 Q0032Q0032 291 nt2.98□□□□□ -1.93
SSF1P38789 GPG1YGL121C 381 nt2.98□□□□□ -1.93
SSF1P38789 APQ12YIL040W 417 nt2.98□□□□□ -1.93
Retrieved 100 of 7,029 protein–RNA pairs in 86.4 ms