Protein–RNA interactions for Protein: S4R434

TMEM56-RWDD3, TMEM56-RWDD3 readthrough, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56-RWDD3S4R434 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC16.55■□□□□ 0.24
TMEM56-RWDD3S4R434 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TMEM56-RWDD3S4R434 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TMEM56-RWDD3S4R434 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TMEM56-RWDD3S4R434 AC008764.7-201ENST00000593779 1081 ntBASIC16.55■□□□□ 0.24
TMEM56-RWDD3S4R434 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC16.55■□□□□ 0.24
TMEM56-RWDD3S4R434 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
TMEM56-RWDD3S4R434 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TMEM56-RWDD3S4R434 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TMEM56-RWDD3S4R434 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
TMEM56-RWDD3S4R434 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TMEM56-RWDD3S4R434 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TMEM56-RWDD3S4R434 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC16.55■□□□□ 0.24
TMEM56-RWDD3S4R434 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC16.55■□□□□ 0.24
TMEM56-RWDD3S4R434 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC16.55■□□□□ 0.24
TMEM56-RWDD3S4R434 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TMEM56-RWDD3S4R434 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC16.55■□□□□ 0.24
TMEM56-RWDD3S4R434 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TMEM56-RWDD3S4R434 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC16.54■□□□□ 0.24
TMEM56-RWDD3S4R434 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TMEM56-RWDD3S4R434 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
TMEM56-RWDD3S4R434 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
TMEM56-RWDD3S4R434 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TMEM56-RWDD3S4R434 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TMEM56-RWDD3S4R434 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC16.54■□□□□ 0.24
TMEM56-RWDD3S4R434 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TMEM56-RWDD3S4R434 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TMEM56-RWDD3S4R434 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC16.54■□□□□ 0.24
TMEM56-RWDD3S4R434 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TMEM56-RWDD3S4R434 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
TMEM56-RWDD3S4R434 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC16.54■□□□□ 0.24
TMEM56-RWDD3S4R434 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TMEM56-RWDD3S4R434 GRAMD4P2-201ENST00000423297 1097 ntBASIC16.54■□□□□ 0.24
TMEM56-RWDD3S4R434 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC16.54■□□□□ 0.24
TMEM56-RWDD3S4R434 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
TMEM56-RWDD3S4R434 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC16.54■□□□□ 0.24
TMEM56-RWDD3S4R434 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TMEM56-RWDD3S4R434 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC16.54■□□□□ 0.24
TMEM56-RWDD3S4R434 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TMEM56-RWDD3S4R434 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC16.54■□□□□ 0.24
TMEM56-RWDD3S4R434 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TMEM56-RWDD3S4R434 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
TMEM56-RWDD3S4R434 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC16.53■□□□□ 0.24
TMEM56-RWDD3S4R434 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TMEM56-RWDD3S4R434 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
TMEM56-RWDD3S4R434 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC16.53■□□□□ 0.24
TMEM56-RWDD3S4R434 AC099791.1-201ENST00000416440 715 ntBASIC16.53■□□□□ 0.24
TMEM56-RWDD3S4R434 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
TMEM56-RWDD3S4R434 AL136162.1-201ENST00000607711 1078 ntBASIC16.53■□□□□ 0.24
TMEM56-RWDD3S4R434 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TMEM56-RWDD3S4R434 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
TMEM56-RWDD3S4R434 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TMEM56-RWDD3S4R434 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TMEM56-RWDD3S4R434 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
TMEM56-RWDD3S4R434 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC16.53■□□□□ 0.24
TMEM56-RWDD3S4R434 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TMEM56-RWDD3S4R434 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TMEM56-RWDD3S4R434 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TMEM56-RWDD3S4R434 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
TMEM56-RWDD3S4R434 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TMEM56-RWDD3S4R434 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
TMEM56-RWDD3S4R434 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TMEM56-RWDD3S4R434 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TMEM56-RWDD3S4R434 BX119927.1-201ENST00000636596 1552 ntBASIC16.52■□□□□ 0.24
TMEM56-RWDD3S4R434 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC16.52■□□□□ 0.24
TMEM56-RWDD3S4R434 MPST-204ENST00000404393 1329 ntTSL 5 BASIC16.52■□□□□ 0.24
TMEM56-RWDD3S4R434 AC135279.3-201ENST00000610945 1311 ntBASIC16.52■□□□□ 0.24
TMEM56-RWDD3S4R434 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
TMEM56-RWDD3S4R434 TREX1-205ENST00000625293 1783 ntBASIC16.52■□□□□ 0.24
TMEM56-RWDD3S4R434 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TMEM56-RWDD3S4R434 AL136116.3-201ENST00000402907 1138 ntBASIC16.52■□□□□ 0.24
TMEM56-RWDD3S4R434 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TMEM56-RWDD3S4R434 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC16.52■□□□□ 0.24
TMEM56-RWDD3S4R434 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
TMEM56-RWDD3S4R434 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
TMEM56-RWDD3S4R434 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.23
TMEM56-RWDD3S4R434 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TMEM56-RWDD3S4R434 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC16.52■□□□□ 0.23
TMEM56-RWDD3S4R434 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TMEM56-RWDD3S4R434 DPP3P2-201ENST00000416030 1696 ntBASIC16.52■□□□□ 0.23
TMEM56-RWDD3S4R434 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TMEM56-RWDD3S4R434 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
TMEM56-RWDD3S4R434 KRT8P36-201ENST00000489121 1440 ntBASIC16.52■□□□□ 0.23
TMEM56-RWDD3S4R434 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
TMEM56-RWDD3S4R434 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
TMEM56-RWDD3S4R434 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TMEM56-RWDD3S4R434 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC16.51■□□□□ 0.23
TMEM56-RWDD3S4R434 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC16.51■□□□□ 0.23
TMEM56-RWDD3S4R434 AC093484.2-201ENST00000580996 2166 ntBASIC16.51■□□□□ 0.23
TMEM56-RWDD3S4R434 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
TMEM56-RWDD3S4R434 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC16.51■□□□□ 0.23
TMEM56-RWDD3S4R434 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TMEM56-RWDD3S4R434 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
TMEM56-RWDD3S4R434 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TMEM56-RWDD3S4R434 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
TMEM56-RWDD3S4R434 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC16.51■□□□□ 0.23
TMEM56-RWDD3S4R434 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
TMEM56-RWDD3S4R434 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TMEM56-RWDD3S4R434 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TMEM56-RWDD3S4R434 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 63.9 ms