RNA–Protein interactions for RNA: ENST00000543119.6

CDK17-203, Transcript of cyclin dependent kinase 17, humanhuman

TSL 2 BASIC

Gene CDK17, Length 2,442 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK17-203ENST00000543119 NISCHQ9Y2I1 1504 aa39.97■■■■□ 3.99
CDK17-203ENST00000543119 CCDC180Q9P1Z9 1646 aa34.12■■■■□ 3.05
CDK17-203ENST00000543119 SHROOM4Q9ULL8 1493 aa33.92■■■■□ 3.02
CDK17-203ENST00000543119 ZCCHC6Q5VYS8 1495 aaKnown RBP33.85■■■■□ 3.01
CDK17-203ENST00000543119 SUPT5HO00267 1087 aaKnown RBP33.28■■■□□ 2.92
CDK17-203ENST00000543119 DCAF1Q9Y4B6 1507 aa32.88■■■□□ 2.85
CDK17-203ENST00000543119 DCAF8L2P0C7V8 631 aa32.85■■■□□ 2.85
CDK17-203ENST00000543119 CHIC1Q5VXU3 224 aa32.49■■■□□ 2.79
CDK17-203ENST00000543119 MYO15BQ96JP2 1530 aa32.43■■■□□ 2.78
CDK17-203ENST00000543119 ABCC9O60706 1549 aa31.97■■■□□ 2.71
CDK17-203ENST00000543119 SCRIBQ14160 1630 aa31.79■■■□□ 2.68
CDK17-203ENST00000543119 RSF1Q96T23 1441 aaPredicted RBP31.63■■■□□ 2.65
CDK17-203ENST00000543119 NACADO15069 1562 aa31.61■■■□□ 2.65
CDK17-203ENST00000543119 HRCP23327 699 aa31.58■■■□□ 2.65
CDK17-203ENST00000543119 LOC105371045A0A1W2PR82 267 aa31.46■■■□□ 2.63
CDK17-203ENST00000543119 PCGF6Q9BYE7 350 aa31.45■■■□□ 2.63
CDK17-203ENST00000543119 RB1CC1Q8TDY2 1594 aa31.32■■■□□ 2.6
CDK17-203ENST00000543119 CECR2Q9BXF3 1484 aa31.13■■■□□ 2.57
CDK17-203ENST00000543119 MROH2BQ7Z745 1585 aa31.05■■■□□ 2.56
CDK17-203ENST00000543119 TRIM41Q8WV44 630 aa31.04■■■□□ 2.56
CDK17-203ENST00000543119 TRIM26Q12899 539 aaPredicted RBP30.92■■■□□ 2.54
CDK17-203ENST00000543119 WIZO95785 1651 aa30.89■■■□□ 2.54
CDK17-203ENST00000543119 PPARGC1BQ86YN6 1023 aaKnown RBP30.84■■■□□ 2.53
CDK17-203ENST00000543119 UNC13AQ9UPW8 1703 aa30.83■■■□□ 2.53
CDK17-203ENST00000543119 BAZ1AQ9NRL2 1556 aaPredicted RBP30.76■■■□□ 2.51
CDK17-203ENST00000543119 FAM9AQ8IZU1 332 aaPredicted RBP30.71■■■□□ 2.51
CDK17-203ENST00000543119 EIF4G1Q04637 1599 aaKnown RBP30.61■■■□□ 2.49
CDK17-203ENST00000543119 TOP2AP11388 1531 aaKnown RBP30.45■■■□□ 2.46
CDK17-203ENST00000543119 SMARCA4P51532 1647 aa30.44■■■□□ 2.46
CDK17-203ENST00000543119 BICRAQ9NZM4 1560 aa30.39■■■□□ 2.46
CDK17-203ENST00000543119 EHMT2Q96KQ7 1210 aa30.37■■■□□ 2.45
CDK17-203ENST00000543119 PABPN1Q86U42 306 aaKnown RBP eCLIP30.31■■■□□ 2.44
CDK17-203ENST00000543119 ZEB1P37275 1124 aaPredicted RBP30.28■■■□□ 2.44
CDK17-203ENST00000543119 SMARCA2P51531 1590 aa30.28■■■□□ 2.44
CDK17-203ENST00000543119 CCDC88BA6NC98 1476 aa30.27■■■□□ 2.44
CDK17-203ENST00000543119 ABCC8Q09428 1581 aa30.19■■■□□ 2.42
CDK17-203ENST00000543119 PEG3Q9GZU2 1588 aa29.91■■■□□ 2.38
CDK17-203ENST00000543119 SOGA1O94964 1423 aa29.91■■■□□ 2.38
CDK17-203ENST00000543119 WRNQ14191 1432 aaPredicted RBP eCLIP29.86■■■□□ 2.37
CDK17-203ENST00000543119 EEA1Q15075 1411 aa29.83■■■□□ 2.37
CDK17-203ENST00000543119 CEP162Q5TB80 1403 aa29.81■■■□□ 2.36
CDK17-203ENST00000543119 TNIKQ9UKE5 1360 aa29.79■■■□□ 2.36
CDK17-203ENST00000543119 RUSC2Q8N2Y8 1516 aa29.76■■■□□ 2.35
CDK17-203ENST00000543119 CSRNP3Q8WYN3 585 aa29.72■■■□□ 2.35
CDK17-203ENST00000543119 ATAD2BQ9ULI0 1458 aa29.68■■■□□ 2.34
CDK17-203ENST00000543119 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.61■■■□□ 2.33
CDK17-203ENST00000543119 GOLGA3Q08378 1498 aa29.61■■■□□ 2.33
CDK17-203ENST00000543119 SYNJ1O43426 1573 aa29.58■■■□□ 2.33
CDK17-203ENST00000543119 BAZ1BQ9UIG0 1483 aaKnown RBP29.55■■■□□ 2.32
CDK17-203ENST00000543119 CCER1Q8TC90 406 aaPredicted RBP29.53■■■□□ 2.32
CDK17-203ENST00000543119 UBTFP17480 764 aaKnown RBP29.53■■■□□ 2.32
CDK17-203ENST00000543119 KIF21BO75037 1637 aa29.46■■■□□ 2.31
CDK17-203ENST00000543119 CEP164Q9UPV0 1460 aa29.44■■■□□ 2.3
CDK17-203ENST00000543119 TTBK1Q5TCY1 1321 aaPredicted RBP29.44■■■□□ 2.3
CDK17-203ENST00000543119 CLIP1P30622 1438 aa29.24■■■□□ 2.27
CDK17-203ENST00000543119 TOP2BQ02880 1626 aa29.24■■■□□ 2.27
CDK17-203ENST00000543119 HMGXB3Q12766 1538 aa29.21■■■□□ 2.27
CDK17-203ENST00000543119 NCAPD3P42695 1498 aa29.21■■■□□ 2.27
CDK17-203ENST00000543119 RAPGEF2Q9Y4G8 1499 aa29.19■■■□□ 2.26
CDK17-203ENST00000543119 BIVM-ERCC5R4GMW8 1640 aa29.16■■■□□ 2.26
CDK17-203ENST00000543119 VPS8Q8N3P4 1428 aa29.15■■■□□ 2.26
CDK17-203ENST00000543119 SCAF1Q9H7N4 1312 aaKnown RBP29.1■■■□□ 2.25
CDK17-203ENST00000543119 DIEXFQ68CQ4 756 aaKnown RBP29.01■■■□□ 2.23
CDK17-203ENST00000543119 ERICH3Q5RHP9 1530 aa28.98■■■□□ 2.23
CDK17-203ENST00000543119 PRXQ9BXM0 1461 aa28.96■■■□□ 2.23
CDK17-203ENST00000543119 CUX1P39880 1505 aa28.92■■■□□ 2.22
CDK17-203ENST00000543119 HNRNPUL2Q1KMD3 747 aaKnown RBP28.9■■■□□ 2.22
CDK17-203ENST00000543119 APLP2Q06481 763 aa28.88■■■□□ 2.21
CDK17-203ENST00000543119 RANGAP1P46060 587 aaPredicted RBP28.83■■■□□ 2.21
CDK17-203ENST00000543119 CFTRP13569 1480 aa28.83■■■□□ 2.21
CDK17-203ENST00000543119 ACIN1Q9UKV3 1341 aaKnown RBP28.83■■■□□ 2.21
CDK17-203ENST00000543119 ZNF316A6NFI3 1004 aaPredicted RBP28.82■■■□□ 2.2
CDK17-203ENST00000543119 ARAP1Q96P48 1450 aa28.81■■■□□ 2.2
CDK17-203ENST00000543119 CC2D2AQ9P2K1 1620 aa28.81■■■□□ 2.2
CDK17-203ENST00000543119 NEUROD1Q13562 356 aa28.77■■■□□ 2.2
CDK17-203ENST00000543119 KIF27Q86VH2 1401 aa28.76■■■□□ 2.19
CDK17-203ENST00000543119 PRDM2Q13029 1718 aa28.71■■■□□ 2.19
CDK17-203ENST00000543119 CENPBP07199 599 aaPredicted RBP28.63■■■□□ 2.17
CDK17-203ENST00000543119 KANK4Q5T7N3 995 aaPredicted RBP28.58■■■□□ 2.17
CDK17-203ENST00000543119 CADPSQ9ULU8 1353 aa28.56■■■□□ 2.16
CDK17-203ENST00000543119 ARHGAP35Q9NRY4 1499 aa28.55■■■□□ 2.16
CDK17-203ENST00000543119 PELP1Q8IZL8 1130 aaKnown RBP28.54■■■□□ 2.16
CDK17-203ENST00000543119 RRBP1Q9P2E9 1410 aaKnown RBP28.51■■■□□ 2.15
CDK17-203ENST00000543119 CLSPNQ9HAW4 1339 aa28.48■■■□□ 2.15
CDK17-203ENST00000543119 DHX57Q6P158 1386 aaKnown RBP28.48■■■□□ 2.15
CDK17-203ENST00000543119 CUX2O14529 1486 aa28.46■■■□□ 2.15
CDK17-203ENST00000543119 GTF3C3Q9Y5Q9 886 aa28.45■■■□□ 2.14
CDK17-203ENST00000543119 IGF1RP08069 1367 aa28.44■■■□□ 2.14
CDK17-203ENST00000543119 MIER1Q8N108 512 aa28.38■■■□□ 2.13
CDK17-203ENST00000543119 FGD5Q6ZNL6 1462 aa28.37■■■□□ 2.13
CDK17-203ENST00000543119 CCNB3Q8WWL7 1395 aa28.33■■■□□ 2.13
CDK17-203ENST00000543119 CARMIL1Q5VZK9 1371 aa28.31■■■□□ 2.12
CDK17-203ENST00000543119 FANCD2Q9BXW9 1451 aa28.31■■■□□ 2.12
CDK17-203ENST00000543119 MAP3K1Q13233 1512 aa28.28■■■□□ 2.12
CDK17-203ENST00000543119 NESP48681 1621 aa28.28■■■□□ 2.12
CDK17-203ENST00000543119 TIAM1Q13009 1591 aa28.27■■■□□ 2.12
CDK17-203ENST00000543119 YTHDC1Q96MU7 727 aaKnown RBP28.24■■■□□ 2.11
CDK17-203ENST00000543119 LRRC9Q6ZRR7 1453 aa28.14■■■□□ 2.09
CDK17-203ENST00000543119 DNMBPQ6XZF7 1577 aa28.13■■■□□ 2.09
CDK17-203ENST00000543119 DNAJC5BQ9UF47 199 aa28.12■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms