RNA–Protein interactions for RNA: ENST00000282412.8

PPM1B-201, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PPM1B, Length 2,606 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1B-201ENST00000282412 NISCHQ9Y2I1 1504 aa38.96■■■■□ 3.83
PPM1B-201ENST00000282412 SHROOM4Q9ULL8 1493 aa33.63■■■□□ 2.97
PPM1B-201ENST00000282412 SUPT5HO00267 1087 aaKnown RBP33.06■■■□□ 2.88
PPM1B-201ENST00000282412 CCDC180Q9P1Z9 1646 aa32.93■■■□□ 2.86
PPM1B-201ENST00000282412 ZCCHC6Q5VYS8 1495 aaKnown RBP32.89■■■□□ 2.86
PPM1B-201ENST00000282412 DCAF8L2P0C7V8 631 aa32.86■■■□□ 2.85
PPM1B-201ENST00000282412 CHIC1Q5VXU3 224 aa32.19■■■□□ 2.74
PPM1B-201ENST00000282412 MYO15BQ96JP2 1530 aa32.15■■■□□ 2.74
PPM1B-201ENST00000282412 HRCP23327 699 aa31.82■■■□□ 2.69
PPM1B-201ENST00000282412 DCAF1Q9Y4B6 1507 aa31.7■■■□□ 2.67
PPM1B-201ENST00000282412 PCGF6Q9BYE7 350 aa31.69■■■□□ 2.66
PPM1B-201ENST00000282412 LOC105371045A0A1W2PR82 267 aa31.38■■■□□ 2.61
PPM1B-201ENST00000282412 SCRIBQ14160 1630 aa31.25■■■□□ 2.59
PPM1B-201ENST00000282412 PPARGC1BQ86YN6 1023 aaKnown RBP31.24■■■□□ 2.59
PPM1B-201ENST00000282412 ABCC9O60706 1549 aa31.11■■■□□ 2.57
PPM1B-201ENST00000282412 TRIM26Q12899 539 aaPredicted RBP30.89■■■□□ 2.54
PPM1B-201ENST00000282412 RSF1Q96T23 1441 aaPredicted RBP30.89■■■□□ 2.54
PPM1B-201ENST00000282412 TRIM41Q8WV44 630 aa30.7■■■□□ 2.5
PPM1B-201ENST00000282412 CECR2Q9BXF3 1484 aa30.63■■■□□ 2.49
PPM1B-201ENST00000282412 RB1CC1Q8TDY2 1594 aa30.6■■■□□ 2.49
PPM1B-201ENST00000282412 FAM9AQ8IZU1 332 aaPredicted RBP30.58■■■□□ 2.49
PPM1B-201ENST00000282412 NACADO15069 1562 aa30.55■■■□□ 2.48
PPM1B-201ENST00000282412 EHMT2Q96KQ7 1210 aa30.43■■■□□ 2.46
PPM1B-201ENST00000282412 MROH2BQ7Z745 1585 aa30.43■■■□□ 2.46
PPM1B-201ENST00000282412 ZEB1P37275 1124 aaPredicted RBP30.32■■■□□ 2.44
PPM1B-201ENST00000282412 WIZO95785 1651 aa30.27■■■□□ 2.44
PPM1B-201ENST00000282412 PABPN1Q86U42 306 aaKnown RBP eCLIP29.9■■■□□ 2.38
PPM1B-201ENST00000282412 BAZ1AQ9NRL2 1556 aaPredicted RBP29.86■■■□□ 2.37
PPM1B-201ENST00000282412 UNC13AQ9UPW8 1703 aa29.82■■■□□ 2.36
PPM1B-201ENST00000282412 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.69■■■□□ 2.34
PPM1B-201ENST00000282412 SMARCA4P51532 1647 aa29.69■■■□□ 2.34
PPM1B-201ENST00000282412 ABCC8Q09428 1581 aa29.64■■■□□ 2.34
PPM1B-201ENST00000282412 CCDC88BA6NC98 1476 aa29.63■■■□□ 2.33
PPM1B-201ENST00000282412 EIF4G1Q04637 1599 aaKnown RBP29.62■■■□□ 2.33
PPM1B-201ENST00000282412 CCER1Q8TC90 406 aaPredicted RBP29.61■■■□□ 2.33
PPM1B-201ENST00000282412 SCAF1Q9H7N4 1312 aaKnown RBP29.6■■■□□ 2.33
PPM1B-201ENST00000282412 TOP2AP11388 1531 aaKnown RBP29.59■■■□□ 2.33
PPM1B-201ENST00000282412 SMARCA2P51531 1590 aa29.51■■■□□ 2.32
PPM1B-201ENST00000282412 TTBK1Q5TCY1 1321 aaPredicted RBP29.51■■■□□ 2.31
PPM1B-201ENST00000282412 BICRAQ9NZM4 1560 aa29.47■■■□□ 2.31
PPM1B-201ENST00000282412 SOGA1O94964 1423 aa29.34■■■□□ 2.29
PPM1B-201ENST00000282412 CEP162Q5TB80 1403 aa29.33■■■□□ 2.29
PPM1B-201ENST00000282412 WRNQ14191 1432 aaPredicted RBP eCLIP29.3■■■□□ 2.28
PPM1B-201ENST00000282412 PELP1Q8IZL8 1130 aaKnown RBP29.28■■■□□ 2.28
PPM1B-201ENST00000282412 RUSC2Q8N2Y8 1516 aa29.26■■■□□ 2.28
PPM1B-201ENST00000282412 UBTFP17480 764 aaKnown RBP29.23■■■□□ 2.27
PPM1B-201ENST00000282412 TNIKQ9UKE5 1360 aa29.22■■■□□ 2.27
PPM1B-201ENST00000282412 CSRNP3Q8WYN3 585 aa29.21■■■□□ 2.27
PPM1B-201ENST00000282412 DIEXFQ68CQ4 756 aaKnown RBP29.21■■■□□ 2.27
PPM1B-201ENST00000282412 ACIN1Q9UKV3 1341 aaKnown RBP29.17■■■□□ 2.26
PPM1B-201ENST00000282412 NEUROD1Q13562 356 aa29.15■■■□□ 2.26
PPM1B-201ENST00000282412 EEA1Q15075 1411 aa29.09■■■□□ 2.25
PPM1B-201ENST00000282412 ATAD2BQ9ULI0 1458 aa29.01■■■□□ 2.23
PPM1B-201ENST00000282412 GOLGA3Q08378 1498 aa28.98■■■□□ 2.23
PPM1B-201ENST00000282412 PEG3Q9GZU2 1588 aa28.96■■■□□ 2.23
PPM1B-201ENST00000282412 CENPBP07199 599 aaPredicted RBP28.95■■■□□ 2.23
PPM1B-201ENST00000282412 BAZ1BQ9UIG0 1483 aaKnown RBP28.92■■■□□ 2.22
PPM1B-201ENST00000282412 GTF3C3Q9Y5Q9 886 aa28.91■■■□□ 2.22
PPM1B-201ENST00000282412 SYNJ1O43426 1573 aa28.9■■■□□ 2.22
PPM1B-201ENST00000282412 ZNF316A6NFI3 1004 aaPredicted RBP28.86■■■□□ 2.21
PPM1B-201ENST00000282412 RANGAP1P46060 587 aaPredicted RBP28.84■■■□□ 2.21
PPM1B-201ENST00000282412 HNRNPUL2Q1KMD3 747 aaKnown RBP28.82■■■□□ 2.2
PPM1B-201ENST00000282412 CEP164Q9UPV0 1460 aa28.77■■■□□ 2.2
PPM1B-201ENST00000282412 CLIP1P30622 1438 aa28.72■■■□□ 2.19
PPM1B-201ENST00000282412 KIF21BO75037 1637 aa28.66■■■□□ 2.18
PPM1B-201ENST00000282412 YTHDC1Q96MU7 727 aaKnown RBP28.65■■■□□ 2.18
PPM1B-201ENST00000282412 APLP2Q06481 763 aa28.64■■■□□ 2.17
PPM1B-201ENST00000282412 VPS8Q8N3P4 1428 aa28.6■■■□□ 2.17
PPM1B-201ENST00000282412 RAPGEF2Q9Y4G8 1499 aa28.58■■■□□ 2.16
PPM1B-201ENST00000282412 MIER1Q8N108 512 aa28.55■■■□□ 2.16
PPM1B-201ENST00000282412 TOP2BQ02880 1626 aa28.4■■■□□ 2.14
PPM1B-201ENST00000282412 NCAPD3P42695 1498 aa28.37■■■□□ 2.13
PPM1B-201ENST00000282412 CUX1P39880 1505 aa28.29■■■□□ 2.12
PPM1B-201ENST00000282412 HMGXB3Q12766 1538 aa28.26■■■□□ 2.11
PPM1B-201ENST00000282412 BIVM-ERCC5R4GMW8 1640 aa28.25■■■□□ 2.11
PPM1B-201ENST00000282412 KANK4Q5T7N3 995 aaPredicted RBP28.21■■■□□ 2.11
PPM1B-201ENST00000282412 ARAP1Q96P48 1450 aa28.17■■■□□ 2.1
PPM1B-201ENST00000282412 PRXQ9BXM0 1461 aa28.17■■■□□ 2.1
PPM1B-201ENST00000282412 DHX57Q6P158 1386 aaKnown RBP28.16■■■□□ 2.1
PPM1B-201ENST00000282412 CFTRP13569 1480 aa28.15■■■□□ 2.1
PPM1B-201ENST00000282412 ERICH3Q5RHP9 1530 aa28.14■■■□□ 2.09
PPM1B-201ENST00000282412 CLSPNQ9HAW4 1339 aa28.12■■■□□ 2.09
PPM1B-201ENST00000282412 KIF27Q86VH2 1401 aa28.06■■■□□ 2.08
PPM1B-201ENST00000282412 ITGAEP38570 1179 aa27.97■■■□□ 2.07
PPM1B-201ENST00000282412 RRBP1Q9P2E9 1410 aaKnown RBP27.96■■■□□ 2.07
PPM1B-201ENST00000282412 CUX2O14529 1486 aa27.93■■■□□ 2.06
PPM1B-201ENST00000282412 CADPSQ9ULU8 1353 aa27.91■■■□□ 2.06
PPM1B-201ENST00000282412 CCNB3Q8WWL7 1395 aa27.9■■■□□ 2.06
PPM1B-201ENST00000282412 ARHGAP35Q9NRY4 1499 aa27.88■■■□□ 2.05
PPM1B-201ENST00000282412 IGF1RP08069 1367 aa27.87■■■□□ 2.05
PPM1B-201ENST00000282412 CC2D2AQ9P2K1 1620 aa27.84■■■□□ 2.05
PPM1B-201ENST00000282412 MYT1Q01538 1121 aa27.84■■■□□ 2.05
PPM1B-201ENST00000282412 FGD5Q6ZNL6 1462 aa27.82■■■□□ 2.04
PPM1B-201ENST00000282412 P3H3Q8IVL6 736 aa27.79■■■□□ 2.04
PPM1B-201ENST00000282412 CARMIL1Q5VZK9 1371 aa27.74■■■□□ 2.03
PPM1B-201ENST00000282412 SUPT16HQ9Y5B9 1047 aaKnown RBP27.72■■■□□ 2.03
PPM1B-201ENST00000282412 RAB3GAP2Q9H2M9 1393 aa27.72■■■□□ 2.03
PPM1B-201ENST00000282412 NESP48681 1621 aa27.72■■■□□ 2.03
PPM1B-201ENST00000282412 PRDM2Q13029 1718 aa27.72■■■□□ 2.03
PPM1B-201ENST00000282412 RAD54L2Q9Y4B4 1467 aa27.68■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms