RNA–Protein interactions for RNA: ENST00000580621.5

KRT16P3-203, Transcript of keratin 16 pseudogene 3, humanhuman

TSL 1 (best) BASIC

Gene KRT16P3, Length 1,939 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT16P3-203ENST00000580621 NISCHQ9Y2I1 1504 aa44.15■■■■■ 4.66
KRT16P3-203ENST00000580621 CCDC180Q9P1Z9 1646 aa38.36■■■■□ 3.73
KRT16P3-203ENST00000580621 ZCCHC6Q5VYS8 1495 aaKnown RBP37.14■■■■□ 3.54
KRT16P3-203ENST00000580621 DCAF1Q9Y4B6 1507 aa36.47■■■■□ 3.43
KRT16P3-203ENST00000580621 DCAF8L2P0C7V8 631 aa36.38■■■■□ 3.41
KRT16P3-203ENST00000580621 SHROOM4Q9ULL8 1493 aa36.26■■■■□ 3.4
KRT16P3-203ENST00000580621 ABCC9O60706 1549 aa36.03■■■■□ 3.36
KRT16P3-203ENST00000580621 MYO15BQ96JP2 1530 aa35.91■■■■□ 3.34
KRT16P3-203ENST00000580621 NACADO15069 1562 aa35.64■■■■□ 3.3
KRT16P3-203ENST00000580621 SCRIBQ14160 1630 aa35.35■■■■□ 3.25
KRT16P3-203ENST00000580621 RB1CC1Q8TDY2 1594 aa35.27■■■■□ 3.24
KRT16P3-203ENST00000580621 SUPT5HO00267 1087 aaKnown RBP35.03■■■■□ 3.2
KRT16P3-203ENST00000580621 UNC13AQ9UPW8 1703 aa34.65■■■■□ 3.14
KRT16P3-203ENST00000580621 RSF1Q96T23 1441 aaPredicted RBP34.37■■■■□ 3.09
KRT16P3-203ENST00000580621 CECR2Q9BXF3 1484 aa34.31■■■■□ 3.08
KRT16P3-203ENST00000580621 BICRAQ9NZM4 1560 aa34.24■■■■□ 3.07
KRT16P3-203ENST00000580621 MROH2BQ7Z745 1585 aa34.14■■■■□ 3.06
KRT16P3-203ENST00000580621 BAZ1AQ9NRL2 1556 aaPredicted RBP34.05■■■■□ 3.04
KRT16P3-203ENST00000580621 PABPN1Q86U42 306 aaKnown RBP eCLIP34.04■■■■□ 3.04
KRT16P3-203ENST00000580621 WIZO95785 1651 aa33.9■■■■□ 3.02
KRT16P3-203ENST00000580621 SMARCA4P51532 1647 aa33.89■■■■□ 3.02
KRT16P3-203ENST00000580621 CHIC1Q5VXU3 224 aa33.67■■■□□ 2.98
KRT16P3-203ENST00000580621 TOP2AP11388 1531 aaKnown RBP33.52■■■□□ 2.96
KRT16P3-203ENST00000580621 PEG3Q9GZU2 1588 aa33.44■■■□□ 2.94
KRT16P3-203ENST00000580621 ATAD2BQ9ULI0 1458 aa33.24■■■□□ 2.91
KRT16P3-203ENST00000580621 SMARCA2P51531 1590 aa33.23■■■□□ 2.91
KRT16P3-203ENST00000580621 CCDC88BA6NC98 1476 aa33.19■■■□□ 2.9
KRT16P3-203ENST00000580621 EIF4G1Q04637 1599 aaKnown RBP33.16■■■□□ 2.9
KRT16P3-203ENST00000580621 BAZ1BQ9UIG0 1483 aaKnown RBP33.08■■■□□ 2.89
KRT16P3-203ENST00000580621 NCAPD3P42695 1498 aa32.89■■■□□ 2.86
KRT16P3-203ENST00000580621 TRIM41Q8WV44 630 aa32.89■■■□□ 2.85
KRT16P3-203ENST00000580621 HMGXB3Q12766 1538 aa32.87■■■□□ 2.85
KRT16P3-203ENST00000580621 ABCC8Q09428 1581 aa32.62■■■□□ 2.81
KRT16P3-203ENST00000580621 CC2D2AQ9P2K1 1620 aa32.62■■■□□ 2.81
KRT16P3-203ENST00000580621 LOC105371045A0A1W2PR82 267 aa32.42■■■□□ 2.78
KRT16P3-203ENST00000580621 FAM9AQ8IZU1 332 aaPredicted RBP32.33■■■□□ 2.77
KRT16P3-203ENST00000580621 WRNQ14191 1432 aaPredicted RBP eCLIP32.33■■■□□ 2.77
KRT16P3-203ENST00000580621 CFTRP13569 1480 aa32.24■■■□□ 2.75
KRT16P3-203ENST00000580621 SYNJ1O43426 1573 aa32.22■■■□□ 2.75
KRT16P3-203ENST00000580621 PRDM2Q13029 1718 aa32.15■■■□□ 2.74
KRT16P3-203ENST00000580621 CADPSQ9ULU8 1353 aa32.07■■■□□ 2.72
KRT16P3-203ENST00000580621 SOGA1O94964 1423 aa32.05■■■□□ 2.72
KRT16P3-203ENST00000580621 TOP2BQ02880 1626 aa32.05■■■□□ 2.72
KRT16P3-203ENST00000580621 BIVM-ERCC5R4GMW8 1640 aa32.02■■■□□ 2.72
KRT16P3-203ENST00000580621 EEA1Q15075 1411 aa32■■■□□ 2.71
KRT16P3-203ENST00000580621 RUSC2Q8N2Y8 1516 aa31.92■■■□□ 2.7
KRT16P3-203ENST00000580621 CUX1P39880 1505 aa31.9■■■□□ 2.7
KRT16P3-203ENST00000580621 EHMT2Q96KQ7 1210 aa31.88■■■□□ 2.69
KRT16P3-203ENST00000580621 CSRNP3Q8WYN3 585 aa31.82■■■□□ 2.68
KRT16P3-203ENST00000580621 NESP48681 1621 aa31.74■■■□□ 2.67
KRT16P3-203ENST00000580621 FANCD2Q9BXW9 1451 aa31.74■■■□□ 2.67
KRT16P3-203ENST00000580621 LAMC3Q9Y6N6 1575 aa31.73■■■□□ 2.67
KRT16P3-203ENST00000580621 DNAJC5BQ9UF47 199 aa31.72■■■□□ 2.67
KRT16P3-203ENST00000580621 KIF21BO75037 1637 aa31.61■■■□□ 2.65
KRT16P3-203ENST00000580621 GOLGA3Q08378 1498 aa31.6■■■□□ 2.65
KRT16P3-203ENST00000580621 CEP164Q9UPV0 1460 aa31.57■■■□□ 2.64
KRT16P3-203ENST00000580621 TNIKQ9UKE5 1360 aa31.56■■■□□ 2.64
KRT16P3-203ENST00000580621 DNMBPQ6XZF7 1577 aa31.51■■■□□ 2.63
KRT16P3-203ENST00000580621 FGD5Q6ZNL6 1462 aa31.5■■■□□ 2.63
KRT16P3-203ENST00000580621 KIF27Q86VH2 1401 aa31.48■■■□□ 2.63
KRT16P3-203ENST00000580621 PDS5BQ9NTI5 1447 aa31.47■■■□□ 2.63
KRT16P3-203ENST00000580621 UBTFP17480 764 aaKnown RBP31.45■■■□□ 2.63
KRT16P3-203ENST00000580621 TOPBP1Q92547 1522 aa31.44■■■□□ 2.62
KRT16P3-203ENST00000580621 CEP162Q5TB80 1403 aa31.42■■■□□ 2.62
KRT16P3-203ENST00000580621 RAPGEF2Q9Y4G8 1499 aa31.38■■■□□ 2.61
KRT16P3-203ENST00000580621 KIF21AQ7Z4S6 1674 aa31.37■■■□□ 2.61
KRT16P3-203ENST00000580621 CUX2O14529 1486 aa31.35■■■□□ 2.61
KRT16P3-203ENST00000580621 PRXQ9BXM0 1461 aa31.35■■■□□ 2.61
KRT16P3-203ENST00000580621 URB2Q14146 1524 aaKnown RBP31.34■■■□□ 2.61
KRT16P3-203ENST00000580621 ERICH3Q5RHP9 1530 aa31.33■■■□□ 2.61
KRT16P3-203ENST00000580621 POLA1P09884 1462 aaPredicted RBP31.3■■■□□ 2.6
KRT16P3-203ENST00000580621 PCGF6Q9BYE7 350 aa31.24■■■□□ 2.59
KRT16P3-203ENST00000580621 RAD54L2Q9Y4B4 1467 aa31.22■■■□□ 2.59
KRT16P3-203ENST00000580621 ABCA10Q8WWZ4 1543 aa31.22■■■□□ 2.59
KRT16P3-203ENST00000580621 IGF1RP08069 1367 aa31.18■■■□□ 2.58
KRT16P3-203ENST00000580621 TRIM26Q12899 539 aaPredicted RBP31.14■■■□□ 2.57
KRT16P3-203ENST00000580621 WDR97A6NE52 1622 aa31.12■■■□□ 2.57
KRT16P3-203ENST00000580621 CLIP1P30622 1438 aa31.11■■■□□ 2.57
KRT16P3-203ENST00000580621 MRC2Q9UBG0 1479 aa31.07■■■□□ 2.56
KRT16P3-203ENST00000580621 CARMIL1Q5VZK9 1371 aa31.03■■■□□ 2.56
KRT16P3-203ENST00000580621 ABCA5Q8WWZ7 1642 aa30.96■■■□□ 2.55
KRT16P3-203ENST00000580621 TARBP1Q13395 1621 aaKnown RBP30.95■■■□□ 2.54
KRT16P3-203ENST00000580621 CUL7Q14999 1698 aa30.93■■■□□ 2.54
KRT16P3-203ENST00000580621 WDR62O43379 1518 aa30.89■■■□□ 2.54
KRT16P3-203ENST00000580621 PPARGC1BQ86YN6 1023 aaKnown RBP30.89■■■□□ 2.54
KRT16P3-203ENST00000580621 RANGAP1P46060 587 aaPredicted RBP30.88■■■□□ 2.53
KRT16P3-203ENST00000580621 TDRD9Q8NDG6 1382 aaKnown RBP30.88■■■□□ 2.53
KRT16P3-203ENST00000580621 VPS8Q8N3P4 1428 aa30.88■■■□□ 2.53
KRT16P3-203ENST00000580621 GAPVD1Q14C86 1478 aa30.85■■■□□ 2.53
KRT16P3-203ENST00000580621 ERCC6Q03468 1493 aa30.85■■■□□ 2.53
KRT16P3-203ENST00000580621 ARAP1Q96P48 1450 aa30.78■■■□□ 2.52
KRT16P3-203ENST00000580621 THOC2Q8NI27 1593 aaKnown RBP30.75■■■□□ 2.51
KRT16P3-203ENST00000580621 IFT140Q96RY7 1462 aa30.73■■■□□ 2.51
KRT16P3-203ENST00000580621 ARHGAP35Q9NRY4 1499 aa30.72■■■□□ 2.51
KRT16P3-203ENST00000580621 PBRM1Q86U86 1689 aa30.7■■■□□ 2.51
KRT16P3-203ENST00000580621 CTTNBP2Q8WZ74 1663 aa30.65■■■□□ 2.5
KRT16P3-203ENST00000580621 AQRO60306 1485 aaKnown RBP eCLIP30.64■■■□□ 2.49
KRT16P3-203ENST00000580621 TTBK1Q5TCY1 1321 aaPredicted RBP30.59■■■□□ 2.49
KRT16P3-203ENST00000580621 ZNF608Q9ULD9 1512 aaPredicted RBP30.58■■■□□ 2.49
KRT16P3-203ENST00000580621 HRCP23327 699 aa30.57■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms