Protein–RNA interactions for Protein: Q08387

DNL4, DNA ligase 4, yeastyeast

Predicted RBP Predictions only

Length 944 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
DNL4Q08387 EGD1YPL037C 474 nt1.9□□□□□ -2.11
DNL4Q08387 NUP192YJL039C 5052 nt1.9□□□□□ -2.11
DNL4Q08387 DNF3YMR162C 4971 nt1.9□□□□□ -2.11
DNL4Q08387 MYO4YAL029C 4416 nt1.9□□□□□ -2.11
DNL4Q08387 YDL068WYDL068W 330 nt1.89□□□□□ -2.11
DNL4Q08387 NOP10YHR072W-A 177 nt1.89□□□□□ -2.11
DNL4Q08387 YHR214W-AYHR214W-A 486 nt1.89□□□□□ -2.11
DNL4Q08387 tT(UGU)Q1tT(UGU)Q1 76 nt1.89□□□□□ -2.11
DNL4Q08387 NFU1YKL040C 771 nt1.89□□□□□ -2.11
DNL4Q08387 YAR068WYAR068W 486 nt1.89□□□□□ -2.11
DNL4Q08387 YOR192C-CYOR192C-C 237 nt1.89□□□□□ -2.11
DNL4Q08387 MYO2YOR326W 4725 nt1.89□□□□□ -2.11
DNL4Q08387 VPS34YLR240W 2628 nt1.88□□□□□ -2.11
DNL4Q08387 ATG9YDL149W 2994 nt1.88□□□□□ -2.11
DNL4Q08387 YBR285WYBR285W 435 nt1.88□□□□□ -2.11
DNL4Q08387 MNE1YOR350C 1992 nt1.88□□□□□ -2.11
DNL4Q08387 GCN2YDR283C 4980 nt1.88□□□□□ -2.11
DNL4Q08387 BFA1YJR053W 1725 nt1.88□□□□□ -2.11
DNL4Q08387 IRC20YLR247C 4671 nt1.87□□□□□ -2.11
DNL4Q08387 YHR138CYHR138C 345 nt1.87□□□□□ -2.11
DNL4Q08387 YKR075W-AYKR075W-A 270 nt1.87□□□□□ -2.11
DNL4Q08387 ZEO1YOL109W 342 nt1.87□□□□□ -2.11
DNL4Q08387 TRM3YDL112W 4311 nt1.87□□□□□ -2.11
DNL4Q08387 BUD2YKL092C 3315 nt1.86□□□□□ -2.11
DNL4Q08387 VPS52YDR484W 1926 nt1.86□□□□□ -2.11
DNL4Q08387 GRX8YLR364W 330 nt1.86□□□□□ -2.11
DNL4Q08387 BPH1YCR032W 6504 nt1.86□□□□□ -2.11
DNL4Q08387 ATP17YDR377W 306 nt1.85□□□□□ -2.11
DNL4Q08387 SMD1YGR074W 441 nt1.85□□□□□ -2.11
DNL4Q08387 YHR028W-AYHR028W-A 321 nt1.85□□□□□ -2.11
DNL4Q08387 YMR324CYMR324C 243 nt1.85□□□□□ -2.11
DNL4Q08387 ROX1YPR065W 1107 nt1.85□□□□□ -2.11
DNL4Q08387 PDR8YLR266C 2106 nt1.85□□□□□ -2.11
DNL4Q08387 IRC10YOL015W 1761 nt1.85□□□□□ -2.11
DNL4Q08387 NUP120YKL057C 3114 nt1.84□□□□□ -2.11
DNL4Q08387 YDL041WYDL041W 354 nt1.84□□□□□ -2.11
DNL4Q08387 YLR053CYLR053C 327 nt1.84□□□□□ -2.11
DNL4Q08387 ERP4YOR016C 624 nt1.84□□□□□ -2.11
DNL4Q08387 YOR053WYOR053W 342 nt1.84□□□□□ -2.11
DNL4Q08387 LYS9YNR050C 1341 nt1.84□□□□□ -2.12
DNL4Q08387 COX1Q0045 1605 nt1.84□□□□□ -2.12
DNL4Q08387 SPO22YIL073C 2928 nt1.84□□□□□ -2.12
DNL4Q08387 CAT2YML042W 2013 nt1.83□□□□□ -2.12
DNL4Q08387 PKH3YDR466W 2697 nt1.83□□□□□ -2.12
DNL4Q08387 snR79snR79 84 nt1.83□□□□□ -2.12
DNL4Q08387 MZM1YDR493W 372 nt1.83□□□□□ -2.12
DNL4Q08387 SDH7YDR511W 402 nt1.83□□□□□ -2.12
DNL4Q08387 RPA34YJL148W 702 nt1.83□□□□□ -2.12
DNL4Q08387 YAR047CYAR047C 321 nt1.83□□□□□ -2.12
DNL4Q08387 SPC72YAL047C 1869 nt1.83□□□□□ -2.12
DNL4Q08387 MMS22YLR320W 4365 nt1.83□□□□□ -2.12
DNL4Q08387 CFT1YDR301W 4074 nt1.83□□□□□ -2.12
DNL4Q08387 YSW1YBR148W 1830 nt1.82□□□□□ -2.12
DNL4Q08387 CBS1YDL069C 690 nt1.82□□□□□ -2.12
DNL4Q08387 HOP2YGL033W 657 nt1.82□□□□□ -2.12
DNL4Q08387 VOA1YGR106C 798 nt1.82□□□□□ -2.12
DNL4Q08387 YHL037CYHL037C 402 nt1.82□□□□□ -2.12
DNL4Q08387 YAL068W-AYAL068W-A 255 nt1.82□□□□□ -2.12
DNL4Q08387 UBC7YMR022W 498 nt1.82□□□□□ -2.12
DNL4Q08387 HER1YOR227W 3741 nt1.82□□□□□ -2.12
DNL4Q08387 YDR341CYDR341C 1824 nt1.82□□□□□ -2.12
DNL4Q08387 MSS11YMR164C 2277 nt1.81□□□□□ -2.12
DNL4Q08387 ATG31YDR022C 591 nt1.81□□□□□ -2.12
DNL4Q08387 YDR286CYDR286C 345 nt1.81□□□□□ -2.12
DNL4Q08387 RPL37BYDR500C 267 nt1.81□□□□□ -2.12
DNL4Q08387 LSO2YGR169C-A 279 nt1.81□□□□□ -2.12
DNL4Q08387 YLR287CYLR287C 1068 nt1.81□□□□□ -2.12
DNL4Q08387 YNL010WYNL010W 726 nt1.81□□□□□ -2.12
DNL4Q08387 MGA2YIR033W 3342 nt1.81□□□□□ -2.12
DNL4Q08387 MKT1YNL085W 2493 nt1.81□□□□□ -2.12
DNL4Q08387 GRR1YJR090C 3456 nt1.81□□□□□ -2.12
DNL4Q08387 DCP2YNL118C 2913 nt1.8□□□□□ -2.12
DNL4Q08387 DAS1YJL149W 1992 nt1.8□□□□□ -2.12
DNL4Q08387 YER076W-AYER076W-A 348 nt1.8□□□□□ -2.12
DNL4Q08387 YHL009W-AYHL009W-A 1242 nt1.8□□□□□ -2.12
DNL4Q08387 YLR434CYLR434C 384 nt1.8□□□□□ -2.12
DNL4Q08387 FIG2YCR089W 4830 nt1.8□□□□□ -2.12
DNL4Q08387 CFT2YLR115W 2580 nt1.8□□□□□ -2.12
DNL4Q08387 SYH1YPL105C 2550 nt1.8□□□□□ -2.12
DNL4Q08387 VPS35YJL154C 2835 nt1.8□□□□□ -2.12
DNL4Q08387 CRM1YGR218W 3255 nt1.79□□□□□ -2.12
DNL4Q08387 YLR035C-AYLR035C-A 3468 nt1.79□□□□□ -2.12
DNL4Q08387 YDR524W-CYDR524W-C 90 nt1.79□□□□□ -2.12
DNL4Q08387 URM1YIL008W 300 nt1.79□□□□□ -2.12
DNL4Q08387 RPS24BYIL069C 408 nt1.79□□□□□ -2.12
DNL4Q08387 SEC22YLR268W 645 nt1.79□□□□□ -2.12
DNL4Q08387 YPR146CYPR146C 330 nt1.79□□□□□ -2.12
DNL4Q08387 YNL144CYNL144C 2223 nt1.79□□□□□ -2.12
DNL4Q08387 CTF4YPR135W 2784 nt1.78□□□□□ -2.12
DNL4Q08387 SWT1YOR166C 1377 nt1.78□□□□□ -2.12
DNL4Q08387 YHL046W-AYHL046W-A 327 nt1.78□□□□□ -2.12
DNL4Q08387 YOR029WYOR029W 336 nt1.78□□□□□ -2.12
DNL4Q08387 RTC6YPL183W-A 282 nt1.78□□□□□ -2.12
DNL4Q08387 KAR3YPR141C 2190 nt1.78□□□□□ -2.13
DNL4Q08387 NAM7YMR080C 2916 nt1.77□□□□□ -2.13
DNL4Q08387 RTP1YMR185W 2946 nt1.77□□□□□ -2.13
DNL4Q08387 DIE2YGR227W 1578 nt1.77□□□□□ -2.13
DNL4Q08387 SBE22YHR103W 2559 nt1.77□□□□□ -2.13
DNL4Q08387 YER023C-AYER023C-A 213 nt1.77□□□□□ -2.13
DNL4Q08387 YER137W-AYER137W-A 306 nt1.77□□□□□ -2.13
Retrieved 100 of 7,029 protein–RNA pairs in 32.8 ms