Protein–RNA interactions for Protein: P54860

UFD2, E4 ubiquitin-protein ligase UFD2, yeastyeast

Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UFD2P54860 PRP6YBR055C 2700 nt3.28□□□□□ -1.88
UFD2P54860 YER088C-AYER088C-A 324 nt3.27□□□□□ -1.89
UFD2P54860 ERP6YGL002W 651 nt3.27□□□□□ -1.89
UFD2P54860 SMD1YGR074W 441 nt3.27□□□□□ -1.89
UFD2P54860 CSE2YNR010W 450 nt3.27□□□□□ -1.89
UFD2P54860 YOR170WYOR170W 306 nt3.27□□□□□ -1.89
UFD2P54860 YOR333CYOR333C 417 nt3.27□□□□□ -1.89
UFD2P54860 YBR224WYBR224W 516 nt3.27□□□□□ -1.89
UFD2P54860 PFK26YIL107C 2484 nt3.27□□□□□ -1.89
UFD2P54860 TRS65YGR166W 1683 nt3.27□□□□□ -1.89
UFD2P54860 LCD1YDR499W 2244 nt3.26□□□□□ -1.89
UFD2P54860 YLR342W-AYLR342W-A 174 nt3.26□□□□□ -1.89
UFD2P54860 RRP12YPL012W 3687 nt3.26□□□□□ -1.89
UFD2P54860 PEX8YGR077C 1770 nt3.25□□□□□ -1.89
UFD2P54860 TRX1YLR043C 312 nt3.25□□□□□ -1.89
UFD2P54860 YMR321CYMR321C 318 nt3.25□□□□□ -1.89
UFD2P54860 YOR015WYOR015W 360 nt3.25□□□□□ -1.89
UFD2P54860 VPS55YJR044C 423 nt3.24□□□□□ -1.89
UFD2P54860 RPS28BYLR264W 204 nt3.24□□□□□ -1.89
UFD2P54860 YPR002C-AYPR002C-A 198 nt3.24□□□□□ -1.89
UFD2P54860 VIK1YPL253C 1944 nt3.24□□□□□ -1.89
UFD2P54860 NOP10YHR072W-A 177 nt3.23□□□□□ -1.89
UFD2P54860 PHD1YKL043W 1101 nt3.23□□□□□ -1.89
UFD2P54860 YBL065WYBL065W 345 nt3.23□□□□□ -1.89
UFD2P54860 RCY1YJL204C 2523 nt3.22□□□□□ -1.89
UFD2P54860 TSC11YER093C 4293 nt3.22□□□□□ -1.89
UFD2P54860 RPL20AYMR242C 519 nt3.22□□□□□ -1.89
UFD2P54860 RPL33AYPL143W 324 nt3.22□□□□□ -1.89
UFD2P54860 YPL216WYPL216W 3309 nt3.22□□□□□ -1.89
UFD2P54860 HSC82YMR186W 2118 nt3.22□□□□□ -1.89
UFD2P54860 RGA2YDR379W 3030 nt3.21□□□□□ -1.9
UFD2P54860 FMP16YDR070C 282 nt3.21□□□□□ -1.9
UFD2P54860 PRP39YML046W 1890 nt3.21□□□□□ -1.9
UFD2P54860 DBP7YKR024C 2229 nt3.21□□□□□ -1.9
UFD2P54860 NOP53YPL146C 1368 nt3.21□□□□□ -1.9
UFD2P54860 AI5_ALPHAQ0070 1893 nt3.2□□□□□ -1.9
UFD2P54860 EFR3YMR212C 2349 nt3.2□□□□□ -1.9
UFD2P54860 SSS1YDR086C 243 nt3.2□□□□□ -1.9
UFD2P54860 YEL014CYEL014C 306 nt3.2□□□□□ -1.9
UFD2P54860 YNL170WYNL170W 396 nt3.2□□□□□ -1.9
UFD2P54860 CFT2YLR115W 2580 nt3.2□□□□□ -1.9
UFD2P54860 SNQ2YDR011W 4506 nt3.2□□□□□ -1.9
UFD2P54860 SEF1YBL066C 3447 nt3.2□□□□□ -1.9
UFD2P54860 GIS4YML006C 2325 nt3.2□□□□□ -1.9
UFD2P54860 MAK21YDR060W 3078 nt3.2□□□□□ -1.9
UFD2P54860 IKI3YLR384C 4050 nt3.19□□□□□ -1.9
UFD2P54860 SPO71YDR104C 3738 nt3.19□□□□□ -1.9
UFD2P54860 VPH1YOR270C 2523 nt3.19□□□□□ -1.9
UFD2P54860 INA22YIR024C 651 nt3.19□□□□□ -1.9
UFD2P54860 DUG2YBR281C 2637 nt3.19□□□□□ -1.9
UFD2P54860 BUD4YJR092W 4344 nt3.18□□□□□ -1.9
UFD2P54860 CDC27YBL084C 2277 nt3.18□□□□□ -1.9
UFD2P54860 YLR149CYLR149C 2193 nt3.18□□□□□ -1.9
UFD2P54860 VPS34YLR240W 2628 nt3.18□□□□□ -1.9
UFD2P54860 OLI1Q0130 231 nt3.18□□□□□ -1.9
UFD2P54860 SIN3YOL004W 4611 nt3.18□□□□□ -1.9
UFD2P54860 RAX2YLR084C 3663 nt3.18□□□□□ -1.9
UFD2P54860 YBT1YLL048C 4986 nt3.18□□□□□ -1.9
UFD2P54860 FIR1YER032W 2631 nt3.18□□□□□ -1.9
UFD2P54860 DYN1YKR054C 12279 nt3.18□□□□□ -1.9
UFD2P54860 MOT1YPL082C 5604 nt3.17□□□□□ -1.9
UFD2P54860 YLR140WYLR140W 327 nt3.17□□□□□ -1.9
UFD2P54860 RRT15YLR162W-A 189 nt3.17□□□□□ -1.9
UFD2P54860 RIF1YBR275C 5751 nt3.17□□□□□ -1.9
UFD2P54860 SDC25YLL016W 3147 nt3.17□□□□□ -1.9
UFD2P54860 PDE2YOR360C 1581 nt3.17□□□□□ -1.9
UFD2P54860 PLC1YPL268W 2610 nt3.16□□□□□ -1.9
UFD2P54860 YAL042C-AYAL042C-A 378 nt3.16□□□□□ -1.9
UFD2P54860 YBR184WYBR184W 1572 nt3.16□□□□□ -1.9
UFD2P54860 SSQ1YLR369W 1974 nt3.16□□□□□ -1.9
UFD2P54860 RSN1YMR266W 2862 nt3.15□□□□□ -1.9
UFD2P54860 YDR286CYDR286C 345 nt3.15□□□□□ -1.91
UFD2P54860 YMR194C-AYMR194C-A 225 nt3.15□□□□□ -1.91
UFD2P54860 TAE2YPL009C 3117 nt3.15□□□□□ -1.91
UFD2P54860 GRR1YJR090C 3456 nt3.15□□□□□ -1.91
UFD2P54860 PEP3YLR148W 2757 nt3.15□□□□□ -1.91
UFD2P54860 PXA2YKL188C 2562 nt3.14□□□□□ -1.91
UFD2P54860 SMY1YKL079W 1971 nt3.14□□□□□ -1.91
UFD2P54860 UBP14YBR058C 2346 nt3.14□□□□□ -1.91
UFD2P54860 RRM3YHR031C 2172 nt3.14□□□□□ -1.91
UFD2P54860 GCV2YMR189W 3105 nt3.14□□□□□ -1.91
UFD2P54860 Q0143Q0143 153 nt3.14□□□□□ -1.91
UFD2P54860 SUL1YBR294W 2580 nt3.14□□□□□ -1.91
UFD2P54860 VPS16YPL045W 2397 nt3.14□□□□□ -1.91
UFD2P54860 YPL150WYPL150W 2706 nt3.13□□□□□ -1.91
UFD2P54860 YLR146W-AYLR146W-A 189 nt3.13□□□□□ -1.91
UFD2P54860 ATG13YPR185W 2217 nt3.13□□□□□ -1.91
UFD2P54860 RIC1YLR039C 3171 nt3.13□□□□□ -1.91
UFD2P54860 SPT21YMR179W 2277 nt3.13□□□□□ -1.91
UFD2P54860 DYN2YDR424C 279 nt3.12□□□□□ -1.91
UFD2P54860 BPT1YLL015W 4680 nt3.12□□□□□ -1.91
UFD2P54860 YBR277CYBR277C 402 nt3.12□□□□□ -1.91
UFD2P54860 COS111YBR203W 2775 nt3.12□□□□□ -1.91
UFD2P54860 KAP123YER110C 3342 nt3.12□□□□□ -1.91
UFD2P54860 ROM1YGR070W 3468 nt3.12□□□□□ -1.91
UFD2P54860 INP2YMR163C 2118 nt3.11□□□□□ -1.91
UFD2P54860 ACB1YGR037C 264 nt3.11□□□□□ -1.91
UFD2P54860 YJL135WYJL135W 318 nt3.11□□□□□ -1.91
UFD2P54860 CRS5YOR031W 210 nt3.11□□□□□ -1.91
UFD2P54860 MMS1YPR164W 4224 nt3.11□□□□□ -1.91
Retrieved 100 of 7,029 protein–RNA pairs in 200.5 ms