Protein–RNA interactions for Protein: P40968

CDC40, Pre-mRNA-processing factor 17, yeastyeast

Predicted RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CDC40P40968 SIP18YMR175W 240 nt1.43□□□□□ -2.18
CDC40P40968 VPS34YLR240W 2628 nt1.43□□□□□ -2.18
CDC40P40968 GYP5YPL249C 2685 nt1.43□□□□□ -2.18
CDC40P40968 BST1YFL025C 3090 nt1.42□□□□□ -2.18
CDC40P40968 SPR3YGR059W 1539 nt1.42□□□□□ -2.18
CDC40P40968 snR84snR84 550 nt1.42□□□□□ -2.18
CDC40P40968 YER121WYER121W 345 nt1.42□□□□□ -2.18
CDC40P40968 ILM1YJR118C 612 nt1.42□□□□□ -2.18
CDC40P40968 NOP15YNL110C 663 nt1.42□□□□□ -2.18
CDC40P40968 SNU56YDR240C 1479 nt1.42□□□□□ -2.18
CDC40P40968 OSH6YKR003W 1347 nt1.41□□□□□ -2.18
CDC40P40968 YBR012W-AYBR012W-A 1323 nt1.41□□□□□ -2.18
CDC40P40968 YOR142W-AYOR142W-A 1323 nt1.41□□□□□ -2.18
CDC40P40968 YPR158W-AYPR158W-A 1323 nt1.41□□□□□ -2.18
CDC40P40968 YLR419WYLR419W 4308 nt1.41□□□□□ -2.18
CDC40P40968 MET32YDR253C 576 nt1.41□□□□□ -2.18
CDC40P40968 YKL068W-AYKL068W-A 237 nt1.41□□□□□ -2.18
CDC40P40968 MAK10YEL053C 2202 nt1.4□□□□□ -2.18
CDC40P40968 DCP2YNL118C 2913 nt1.4□□□□□ -2.18
CDC40P40968 DDR48YMR173W 1293 nt1.4□□□□□ -2.19
CDC40P40968 EGD1YPL037C 474 nt1.4□□□□□ -2.19
CDC40P40968 YCL046WYCL046W 324 nt1.4□□□□□ -2.19
CDC40P40968 SEC5YDR166C 2916 nt1.39□□□□□ -2.19
CDC40P40968 PEX8YGR077C 1770 nt1.39□□□□□ -2.19
CDC40P40968 RKM1YPL208W 1752 nt1.39□□□□□ -2.19
CDC40P40968 YLR140WYLR140W 327 nt1.39□□□□□ -2.19
CDC40P40968 YBR121C-AYBR121C-A 159 nt1.39□□□□□ -2.19
CDC40P40968 SHE9YDR393W 1371 nt1.38□□□□□ -2.19
CDC40P40968 NCA2YPR155C 1851 nt1.38□□□□□ -2.19
CDC40P40968 CIC1YHR052W 1131 nt1.38□□□□□ -2.19
CDC40P40968 FCF2YLR051C 654 nt1.38□□□□□ -2.19
CDC40P40968 RPS18BYML026C 441 nt1.38□□□□□ -2.19
CDC40P40968 YBR174CYBR174C 315 nt1.38□□□□□ -2.19
CDC40P40968 SBE22YHR103W 2559 nt1.38□□□□□ -2.19
CDC40P40968 SMC4YLR086W 4257 nt1.37□□□□□ -2.19
CDC40P40968 SFB2YNL049C 2631 nt1.37□□□□□ -2.19
CDC40P40968 CHS1YNL192W 3396 nt1.37□□□□□ -2.19
CDC40P40968 QCR7YDR529C 384 nt1.37□□□□□ -2.19
CDC40P40968 YEL050W-AYEL050W-A 192 nt1.37□□□□□ -2.19
CDC40P40968 YJL015CYJL015C 285 nt1.37□□□□□ -2.19
CDC40P40968 YBL073WYBL073W 312 nt1.37□□□□□ -2.19
CDC40P40968 YPR039WYPR039W 336 nt1.37□□□□□ -2.19
CDC40P40968 FAB1YFR019W 6837 nt1.37□□□□□ -2.19
CDC40P40968 CDC24YAL041W 2565 nt1.37□□□□□ -2.19
CDC40P40968 BUD3YCL014W 4911 nt1.36□□□□□ -2.19
CDC40P40968 YJL022WYJL022W 309 nt1.36□□□□□ -2.19
CDC40P40968 COF1YLL050C 432 nt1.36□□□□□ -2.19
CDC40P40968 YNR025CYNR025C 360 nt1.36□□□□□ -2.19
CDC40P40968 HHT1YBR010W 411 nt1.36□□□□□ -2.19
CDC40P40968 YGR265WYGR265W 411 nt1.35□□□□□ -2.19
CDC40P40968 ABM1YJR108W 372 nt1.35□□□□□ -2.19
CDC40P40968 MEI5YPL121C 669 nt1.35□□□□□ -2.19
CDC40P40968 SEC21YNL287W 2808 nt1.35□□□□□ -2.19
CDC40P40968 CFT1YDR301W 4074 nt1.35□□□□□ -2.19
CDC40P40968 TBS1YBR150C 3285 nt1.35□□□□□ -2.19
CDC40P40968 KCS1YDR017C 3153 nt1.35□□□□□ -2.19
CDC40P40968 ALK1YGL021W 2283 nt1.35□□□□□ -2.19
CDC40P40968 SWI5YDR146C 2130 nt1.34□□□□□ -2.19
CDC40P40968 EMC4YGL231C 573 nt1.34□□□□□ -2.19
CDC40P40968 PAU18YLL064C 363 nt1.34□□□□□ -2.19
CDC40P40968 YLR255CYLR255C 354 nt1.34□□□□□ -2.19
CDC40P40968 CTK3YML112W 891 nt1.34□□□□□ -2.19
CDC40P40968 PAU6YNR076W 363 nt1.34□□□□□ -2.19
CDC40P40968 YOL159C-AYOL159C-A 273 nt1.34□□□□□ -2.19
CDC40P40968 RCN2YOR220W 798 nt1.34□□□□□ -2.19
CDC40P40968 YOR392WYOR392W 444 nt1.34□□□□□ -2.19
CDC40P40968 YPR099CYPR099C 357 nt1.34□□□□□ -2.19
CDC40P40968 GNT1YOR320C 1476 nt1.34□□□□□ -2.19
CDC40P40968 MVP1YMR004W 1536 nt1.34□□□□□ -2.2
CDC40P40968 YBP1YBR216C 2025 nt1.33□□□□□ -2.2
CDC40P40968 CCH1YGR217W 6120 nt1.33□□□□□ -2.2
CDC40P40968 ATG11YPR049C 3537 nt1.33□□□□□ -2.2
CDC40P40968 YDL152WYDL152W 366 nt1.33□□□□□ -2.2
CDC40P40968 PAN3YKL025C 2040 nt1.33□□□□□ -2.2
CDC40P40968 YOR192C-AYOR192C-A 1317 nt1.33□□□□□ -2.2
CDC40P40968 PHR1YOR386W 1698 nt1.32□□□□□ -2.2
CDC40P40968 HDA3YPR179C 1968 nt1.32□□□□□ -2.2
CDC40P40968 DAD4YDR320C-A 219 nt1.32□□□□□ -2.2
CDC40P40968 YAP3YHL009C 993 nt1.32□□□□□ -2.2
CDC40P40968 APQ13YJL075C 417 nt1.32□□□□□ -2.2
CDC40P40968 GPI15YNL038W 690 nt1.32□□□□□ -2.2
CDC40P40968 YNL114CYNL114C 372 nt1.32□□□□□ -2.2
CDC40P40968 YOR248WYOR248W 303 nt1.32□□□□□ -2.2
CDC40P40968 YOR376WYOR376W 369 nt1.32□□□□□ -2.2
CDC40P40968 RAD50YNL250W 3939 nt1.32□□□□□ -2.2
CDC40P40968 MSH5YDL154W 2706 nt1.31□□□□□ -2.2
CDC40P40968 MTC7YEL033W 420 nt1.31□□□□□ -2.2
CDC40P40968 RPL9AYGL147C 576 nt1.31□□□□□ -2.2
CDC40P40968 YMR272W-BYMR272W-B 108 nt1.31□□□□□ -2.2
CDC40P40968 YBR032WYBR032W 303 nt1.31□□□□□ -2.2
CDC40P40968 YBR071WYBR071W 636 nt1.31□□□□□ -2.2
CDC40P40968 PET127YOR017W 2403 nt1.31□□□□□ -2.2
CDC40P40968 MLH3YPL164C 2148 nt1.31□□□□□ -2.2
CDC40P40968 ZIP1YDR285W 2628 nt1.31□□□□□ -2.2
CDC40P40968 ZRG17YNR039C 1818 nt1.31□□□□□ -2.2
CDC40P40968 IRA1YBR140C 9279 nt1.3□□□□□ -2.2
CDC40P40968 YDL158CYDL158C 309 nt1.3□□□□□ -2.2
CDC40P40968 tQ(UUG)E2tQ(UUG)E2 72 nt1.3□□□□□ -2.2
CDC40P40968 EAF6YJR082C 342 nt1.3□□□□□ -2.2
CDC40P40968 TSC3YBR058C-A 243 nt1.3□□□□□ -2.2
Retrieved 100 of 7,029 protein–RNA pairs in 169 ms