Protein–RNA interactions for Protein: P38811

TRA1, Transcription-associated protein 1, yeastyeast

Predictions only

Length 3,744 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TRA1P38811 YOR020W-AYOR020W-A 273 nt-0.46□□□□□ -2.48
TRA1P38811 YDR034C-CYDR034C-C 1317 nt-0.46□□□□□ -2.48
TRA1P38811 PCL9YDL179W 915 nt-0.46□□□□□ -2.48
TRA1P38811 ECM11YDR446W 909 nt-0.46□□□□□ -2.48
TRA1P38811 RCN2YOR220W 798 nt-0.47□□□□□ -2.48
TRA1P38811 SBH1YER087C-B 249 nt-0.47□□□□□ -2.48
TRA1P38811 YPR170CYPR170C 336 nt-0.47□□□□□ -2.48
TRA1P38811 SLX4YLR135W 2247 nt-0.47□□□□□ -2.48
TRA1P38811 SLI15YBR156C 2097 nt-0.47□□□□□ -2.48
TRA1P38811 TIM8YJR135W-A 264 nt-0.47□□□□□ -2.49
TRA1P38811 UAF30YOR295W 687 nt-0.47□□□□□ -2.49
TRA1P38811 EFR3YMR212C 2349 nt-0.47□□□□□ -2.49
TRA1P38811 VPS52YDR484W 1926 nt-0.47□□□□□ -2.49
TRA1P38811 HOP2YGL033W 657 nt-0.48□□□□□ -2.49
TRA1P38811 snR63snR63 255 nt-0.48□□□□□ -2.49
TRA1P38811 RPS29BYDL061C 171 nt-0.48□□□□□ -2.49
TRA1P38811 EMC5YIL027C 426 nt-0.48□□□□□ -2.49
TRA1P38811 IRC14YOR135C 342 nt-0.48□□□□□ -2.49
TRA1P38811 RFX1YLR176C 2436 nt-0.48□□□□□ -2.49
TRA1P38811 PRM8YGL053W 714 nt-0.48□□□□□ -2.49
TRA1P38811 CMC2YBL059C-A 330 nt-0.48□□□□□ -2.49
TRA1P38811 RPB5YBR154C 648 nt-0.49□□□□□ -2.49
TRA1P38811 YKL177WYKL177W 339 nt-0.49□□□□□ -2.49
TRA1P38811 SLF1YDR515W 1344 nt-0.49□□□□□ -2.49
TRA1P38811 IMP3YHR148W 552 nt-0.5□□□□□ -2.49
TRA1P38811 BMT5YIL096C 1011 nt-0.5□□□□□ -2.49
TRA1P38811 ALG5YPL227C 1005 nt-0.5□□□□□ -2.49
TRA1P38811 HUB1YNR032C-A 222 nt-0.51□□□□□ -2.49
TRA1P38811 GDS1YOR355W 1569 nt-0.51□□□□□ -2.49
TRA1P38811 YOP1YPR028W 543 nt-0.52□□□□□ -2.49
TRA1P38811 YDR003W-AYDR003W-A 123 nt-0.52□□□□□ -2.49
TRA1P38811 YGR042WYGR042W 816 nt-0.52□□□□□ -2.49
TRA1P38811 NUT1YGL151W 3399 nt-0.52□□□□□ -2.49
TRA1P38811 FMP23YBR047W 528 nt-0.52□□□□□ -2.49
TRA1P38811 IRC19YLL033W 693 nt-0.53□□□□□ -2.49
TRA1P38811 NTF2YER009W 378 nt-0.54□□□□□ -2.5
TRA1P38811 MET32YDR253C 576 nt-0.54□□□□□ -2.5
TRA1P38811 CKA1YIL035C 1119 nt-0.55□□□□□ -2.5
TRA1P38811 MUB1YMR100W 1863 nt-0.56□□□□□ -2.5
TRA1P38811 YPL060C-AYPL060C-A 3315 nt-0.56□□□□□ -2.5
TRA1P38811 CUL3YGR003W 2235 nt-0.56□□□□□ -2.5
TRA1P38811 SFT1YKL006C-A 294 nt-0.56□□□□□ -2.5
TRA1P38811 YOR376WYOR376W 369 nt-0.56□□□□□ -2.5
TRA1P38811 ASE1YOR058C 2658 nt-0.57□□□□□ -2.5
TRA1P38811 RPS7BYNL096C 573 nt-0.57□□□□□ -2.5
TRA1P38811 YBR200W-AYBR200W-A 165 nt-0.57□□□□□ -2.5
TRA1P38811 EST1YLR233C 2100 nt-0.57□□□□□ -2.5
TRA1P38811 RCN1YKL159C 636 nt-0.57□□□□□ -2.5
TRA1P38811 RPL40BYKR094C 387 nt-0.57□□□□□ -2.5
TRA1P38811 PFK27YOL136C 1194 nt-0.57□□□□□ -2.5
TRA1P38811 snR161snR161 161 nt-0.57□□□□□ -2.5
TRA1P38811 YKL156C-AYKL156C-A 117 nt-0.58□□□□□ -2.5
TRA1P38811 snR84snR84 550 nt-0.58□□□□□ -2.5
TRA1P38811 YDR114CYDR114C 303 nt-0.58□□□□□ -2.5
TRA1P38811 GIM3YNL153C 390 nt-0.58□□□□□ -2.5
TRA1P38811 COG6YNL041C 2520 nt-0.58□□□□□ -2.5
TRA1P38811 SPO77YLR341W 1434 nt-0.58□□□□□ -2.5
TRA1P38811 ARK1YNL020C 1917 nt-0.58□□□□□ -2.5
TRA1P38811 YBL039C-AYBL039C-A 84 nt-0.59□□□□□ -2.5
TRA1P38811 HOT13YKL084W 351 nt-0.59□□□□□ -2.5
TRA1P38811 OMA1YKR087C 1038 nt-0.59□□□□□ -2.5
TRA1P38811 VPS28YPL065W 729 nt-0.59□□□□□ -2.5
TRA1P38811 TAR1YLR154W-C 375 nt-0.6□□□□□ -2.5
TRA1P38811 YNR034W-AYNR034W-A 297 nt-0.6□□□□□ -2.5
TRA1P38811 PGA1YNL158W 597 nt-0.6□□□□□ -2.51
TRA1P38811 snR11snR11 258 nt-0.6□□□□□ -2.51
TRA1P38811 YGR045CYGR045C 363 nt-0.61□□□□□ -2.51
TRA1P38811 RSM28YDR494W 1086 nt-0.61□□□□□ -2.51
TRA1P38811 LSO2YGR169C-A 279 nt-0.61□□□□□ -2.51
TRA1P38811 YBR012CYBR012C 420 nt-0.61□□□□□ -2.51
TRA1P38811 ADF1YCL058W-A 342 nt-0.61□□□□□ -2.51
TRA1P38811 APC5YOR249C 2058 nt-0.61□□□□□ -2.51
TRA1P38811 RPS27AYKL156W 249 nt-0.61□□□□□ -2.51
TRA1P38811 SRB4YER022W 2064 nt-0.61□□□□□ -2.51
TRA1P38811 YDR286CYDR286C 345 nt-0.62□□□□□ -2.51
TRA1P38811 YIR036W-AYIR036W-A 402 nt-0.62□□□□□ -2.51
TRA1P38811 snR128snR128 126 nt-0.62□□□□□ -2.51
TRA1P38811 YHR063W-AYHR063W-A 336 nt-0.62□□□□□ -2.51
TRA1P38811 JJJ2YJL162C 1752 nt-0.62□□□□□ -2.51
TRA1P38811 SLD3YGL113W 2007 nt-0.62□□□□□ -2.51
TRA1P38811 NPR2YEL062W 1848 nt-0.63□□□□□ -2.51
TRA1P38811 YMR31YFR049W 372 nt-0.63□□□□□ -2.51
TRA1P38811 CPR3YML078W 549 nt-0.63□□□□□ -2.51
TRA1P38811 CCL1YPR025C 1182 nt-0.63□□□□□ -2.51
TRA1P38811 YOR186C-AYOR186C-A 210 nt-0.63□□□□□ -2.51
TRA1P38811 SNF11YDR073W 510 nt-0.64□□□□□ -2.51
TRA1P38811 SMD1YGR074W 441 nt-0.64□□□□□ -2.51
TRA1P38811 STO1YMR125W 2586 nt-0.65□□□□□ -2.51
TRA1P38811 YDR340WYDR340W 303 nt-0.65□□□□□ -2.51
TRA1P38811 YLR252WYLR252W 306 nt-0.65□□□□□ -2.51
TRA1P38811 YCR102W-AYCR102W-A 198 nt-0.65□□□□□ -2.51
TRA1P38811 YDR042CYDR042C 603 nt-0.65□□□□□ -2.51
TRA1P38811 REV7YIL139C 738 nt-0.65□□□□□ -2.51
TRA1P38811 YBL068W-AYBL068W-A 237 nt-0.65□□□□□ -2.51
TRA1P38811 POL32YJR043C 1053 nt-0.66□□□□□ -2.51
TRA1P38811 SPC42YKL042W 1092 nt-0.66□□□□□ -2.51
TRA1P38811 SDH2YLL041C 801 nt-0.66□□□□□ -2.51
TRA1P38811 MER1YNL210W 813 nt-0.66□□□□□ -2.51
TRA1P38811 snR191snR191 274 nt-0.66□□□□□ -2.51
TRA1P38811 DAS1YJL149W 1992 nt-0.66□□□□□ -2.51
Retrieved 100 of 7,029 protein–RNA pairs in 27.7 ms