Protein–RNA interactions for Protein: P38235

YBR053C, Uncharacterized protein YBR053C, yeast

Predictions only

Length 358 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
YBR053C	P38235	SEC26	YDR238C	2922 nt		2.66	□□□□□ -1.98
YBR053C	P38235	SGD1	YLR336C	2700 nt		2.66	□□□□□ -1.98
YBR053C	P38235	PNC1	YGL037C	651 nt		2.66	□□□□□ -1.98
YBR053C	P38235	YGL069C	YGL069C	465 nt		2.66	□□□□□ -1.98
YBR053C	P38235	FKS3	YMR306W	5358 nt		2.66	□□□□□ -1.98
YBR053C	P38235	ECM29	YHL030W	5607 nt		2.66	□□□□□ -1.98
YBR053C	P38235	PRP8	YHR165C	7242 nt		2.66	□□□□□ -1.98
YBR053C	P38235	SEC7	YDR170C	6030 nt		2.66	□□□□□ -1.98
YBR053C	P38235	PTP3	YER075C	2787 nt		2.66	□□□□□ -1.98
YBR053C	P38235	YJL070C	YJL070C	2667 nt		2.65	□□□□□ -1.98
YBR053C	P38235	BFA1	YJR053W	1725 nt		2.65	□□□□□ -1.98
YBR053C	P38235	PAU2	YEL049W	363 nt		2.65	□□□□□ -1.99
YBR053C	P38235	RGM1	YMR182C	636 nt		2.65	□□□□□ -1.99
YBR053C	P38235	LSM7	YNL147W	348 nt		2.65	□□□□□ -1.99
YBR053C	P38235	MPH1	YIR002C	2982 nt		2.65	□□□□□ -1.99
YBR053C	P38235	NCL1	YBL024W	2055 nt		2.65	□□□□□ -1.99
YBR053C	P38235	RPO41	YFL036W	4056 nt		2.65	□□□□□ -1.99
YBR053C	P38235	RRP12	YPL012W	3687 nt		2.64	□□□□□ -1.99
YBR053C	P38235	KSP1	YHR082C	3090 nt		2.64	□□□□□ -1.99
YBR053C	P38235	YGL052W	YGL052W	306 nt		2.64	□□□□□ -1.99
YBR053C	P38235	PCC1	YKR095W-A	267 nt		2.64	□□□□□ -1.99
YBR053C	P38235	GRX8	YLR364W	330 nt		2.64	□□□□□ -1.99
YBR053C	P38235	YOR302W	YOR302W	78 nt		2.64	□□□□□ -1.99
YBR053C	P38235	NET1	YJL076W	3570 nt		2.64	□□□□□ -1.99
YBR053C	P38235	ALK2	YBL009W	2031 nt		2.64	□□□□□ -1.99
YBR053C	P38235	YLL032C	YLL032C	2478 nt		2.64	□□□□□ -1.99
YBR053C	P38235	PDR3	YBL005W	2931 nt		2.64	□□□□□ -1.99
YBR053C	P38235	DBP7	YKR024C	2229 nt		2.64	□□□□□ -1.99
YBR053C	P38235	SRB8	YCR081W	4284 nt		2.63	□□□□□ -1.99
YBR053C	P38235	TOF2	YKR010C	2316 nt		2.63	□□□□□ -1.99
YBR053C	P38235	PAN3	YKL025C	2040 nt		2.63	□□□□□ -1.99
YBR053C	P38235	DNL4	YOR005C	2835 nt		2.63	□□□□□ -1.99
YBR053C	P38235	YRB1	YDR002W	606 nt		2.63	□□□□□ -1.99
YBR053C	P38235	EMC6	YLL014W	327 nt		2.63	□□□□□ -1.99
YBR053C	P38235	RPL38	YLR325C	237 nt		2.63	□□□□□ -1.99
YBR053C	P38235	YMR172C-A	YMR172C-A	384 nt		2.63	□□□□□ -1.99
YBR053C	P38235	ESL1	YIL151C	3357 nt		2.63	□□□□□ -1.99
YBR053C	P38235	PDR1	YGL013C	3207 nt		2.63	□□□□□ -1.99
YBR053C	P38235	PTC5	YOR090C	1719 nt		2.62	□□□□□ -1.99
YBR053C	P38235	SCW11	YGL028C	1629 nt		2.62	□□□□□ -1.99
YBR053C	P38235	YML007C-A	YML007C-A	111 nt		2.62	□□□□□ -1.99
YBR053C	P38235	YMR141W-A	YMR141W-A	225 nt		2.62	□□□□□ -1.99
YBR053C	P38235	MOT1	YPL082C	5604 nt		2.62	□□□□□ -1.99
YBR053C	P38235	NAB6	YML117W	3405 nt		2.62	□□□□□ -1.99
YBR053C	P38235	SMC2	YFR031C	3513 nt		2.62	□□□□□ -1.99
YBR053C	P38235	UBP11	YKR098C	2154 nt		2.61	□□□□□ -1.99
YBR053C	P38235	YDR186C	YDR186C	2634 nt		2.61	□□□□□ -1.99
YBR053C	P38235	GUP1	YGL084C	1683 nt		2.61	□□□□□ -1.99
YBR053C	P38235	YDL007C-A	YDL007C-A	258 nt		2.61	□□□□□ -1.99
YBR053C	P38235	YDR426C	YDR426C	378 nt		2.61	□□□□□ -1.99
YBR053C	P38235	YNL028W	YNL028W	318 nt		2.61	□□□□□ -1.99
YBR053C	P38235	YOR170W	YOR170W	306 nt		2.61	□□□□□ -1.99
YBR053C	P38235	RTT10	YPL183C	3042 nt		2.61	□□□□□ -1.99
YBR053C	P38235	YPR089W	YPR089W	2667 nt		2.61	□□□□□ -1.99
YBR053C	P38235	ESL2	YKR096W	3588 nt		2.61	□□□□□ -1.99
YBR053C	P38235	INP52	YNL106C	3552 nt		2.61	□□□□□ -1.99
YBR053C	P38235	CAF120	YNL278W	3183 nt		2.61	□□□□□ -1.99
YBR053C	P38235	FPR1	YNL135C	345 nt		2.6	□□□□□ -1.99
YBR053C	P38235	FLO11	YIR019C	4104 nt		2.6	□□□□□ -1.99
YBR053C	P38235	DSE4	YNR067C	3354 nt		2.59	□□□□□ -1.99
YBR053C	P38235	YEL014C	YEL014C	306 nt		2.59	□□□□□ -1.99
YBR053C	P38235	VMA9	YCL005W-A	222 nt		2.59	□□□□□ -1.99
YBR053C	P38235	TRS65	YGR166W	1683 nt		2.58	□□□□□ -2
YBR053C	P38235	PRE4	YFR050C	801 nt		2.58	□□□□□ -2
YBR053C	P38235	UPS1	YLR193C	528 nt		2.58	□□□□□ -2
YBR053C	P38235	SNC2	YOR327C	348 nt		2.58	□□□□□ -2
YBR053C	P38235	SAK1	YER129W	3429 nt		2.58	□□□□□ -2
YBR053C	P38235	RGR1	YLR071C	3249 nt		2.58	□□□□□ -2
YBR053C	P38235	VIK1	YPL253C	1944 nt		2.58	□□□□□ -2
YBR053C	P38235	TMN3	YER113C	2121 nt		2.57	□□□□□ -2
YBR053C	P38235	PEX8	YGR077C	1770 nt		2.57	□□□□□ -2
YBR053C	P38235	YER088C-A	YER088C-A	324 nt		2.57	□□□□□ -2
YBR053C	P38235	YLR342W-A	YLR342W-A	174 nt		2.57	□□□□□ -2
YBR053C	P38235	CSE2	YNR010W	450 nt		2.57	□□□□□ -2
YBR053C	P38235	NUT2	YPR168W	474 nt		2.57	□□□□□ -2
YBR053C	P38235	YBR224W	YBR224W	516 nt		2.57	□□□□□ -2
YBR053C	P38235	COS111	YBR203W	2775 nt		2.57	□□□□□ -2
YBR053C	P38235	YBT1	YLL048C	4986 nt		2.57	□□□□□ -2
YBR053C	P38235	VPH1	YOR270C	2523 nt		2.56	□□□□□ -2
YBR053C	P38235	tF(GAA)Q	tF(GAA)Q	75 nt		2.56	□□□□□ -2
YBR053C	P38235	YJL150W	YJL150W	303 nt		2.56	□□□□□ -2
YBR053C	P38235	VPS35	YJL154C	2835 nt		2.56	□□□□□ -2
YBR053C	P38235	PSK1	YAL017W	4071 nt		2.56	□□□□□ -2
YBR053C	P38235	EFR3	YMR212C	2349 nt		2.56	□□□□□ -2
YBR053C	P38235	TOM1	YDR457W	9807 nt		2.55	□□□□□ -2
YBR053C	P38235	VPS55	YJR044C	423 nt		2.55	□□□□□ -2
YBR053C	P38235	YMR321C	YMR321C	318 nt		2.55	□□□□□ -2
YBR053C	P38235	YOR055W	YOR055W	435 nt		2.55	□□□□□ -2
YBR053C	P38235	JSN1	YJR091C	3276 nt		2.55	□□□□□ -2
YBR053C	P38235	RSN1	YMR266W	2862 nt		2.55	□□□□□ -2
YBR053C	P38235	PRP6	YBR055C	2700 nt		2.55	□□□□□ -2
YBR053C	P38235	SNF5	YBR289W	2718 nt		2.55	□□□□□ -2
YBR053C	P38235	CFT2	YLR115W	2580 nt		2.55	□□□□□ -2
YBR053C	P38235	LCD1	YDR499W	2244 nt		2.54	□□□□□ -2
YBR053C	P38235	FRE2	YKL220C	2136 nt		2.54	□□□□□ -2
YBR053C	P38235	YDR098C-B	YDR098C-B	5268 nt		2.54	□□□□□ -2
YBR053C	P38235	YDR210C-D	YDR210C-D	5268 nt		2.54	□□□□□ -2
YBR053C	P38235	YDR316W-B	YDR316W-B	5268 nt		2.54	□□□□□ -2
YBR053C	P38235	YDR365W-B	YDR365W-B	5268 nt		2.54	□□□□□ -2
YBR053C	P38235	YER138C	YER138C	5268 nt		2.54	□□□□□ -2

Retrieved 100 of 7,029 protein–RNA pairs in 27.8 ms