Protein–RNA interactions for Protein: P35732

DEF1, RNA polymerase II degradation factor 1, yeastyeast

Known RBP Predictions only

Length 738 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
DEF1P35732 CHO2YGR157W 2610 nt2.92□□□□□ -1.94
DEF1P35732 BRO1YPL084W 2535 nt2.92□□□□□ -1.94
DEF1P35732 YME2YMR302C 2553 nt2.92□□□□□ -1.94
DEF1P35732 YER189WYER189W 369 nt2.92□□□□□ -1.94
DEF1P35732 HHT1YBR010W 411 nt2.92□□□□□ -1.94
DEF1P35732 YPR063CYPR063C 423 nt2.92□□□□□ -1.94
DEF1P35732 MLH1YMR167W 2310 nt2.92□□□□□ -1.94
DEF1P35732 TRM7YBR061C 933 nt2.91□□□□□ -1.94
DEF1P35732 snR191snR191 274 nt2.91□□□□□ -1.94
DEF1P35732 FLO5YHR211W 3228 nt2.91□□□□□ -1.94
DEF1P35732 YGR250CYGR250C 2346 nt2.91□□□□□ -1.94
DEF1P35732 ROG1YGL144C 2058 nt2.91□□□□□ -1.94
DEF1P35732 21S_rRNA21S_rRNA 3296 nt2.9□□□□□ -1.95
DEF1P35732 YOR015WYOR015W 360 nt2.9□□□□□ -1.95
DEF1P35732 BNI1YNL271C 5862 nt2.9□□□□□ -1.95
DEF1P35732 SUL1YBR294W 2580 nt2.9□□□□□ -1.95
DEF1P35732 HDA3YPR179C 1968 nt2.89□□□□□ -1.95
DEF1P35732 YER121WYER121W 345 nt2.89□□□□□ -1.95
DEF1P35732 YHR180W-AYHR180W-A 183 nt2.89□□□□□ -1.95
DEF1P35732 PCC1YKR095W-A 267 nt2.89□□□□□ -1.95
DEF1P35732 YNL028WYNL028W 318 nt2.89□□□□□ -1.95
DEF1P35732 DUG2YBR281C 2637 nt2.89□□□□□ -1.95
DEF1P35732 NEW1YPL226W 3591 nt2.89□□□□□ -1.95
DEF1P35732 AI5_ALPHAQ0070 1893 nt2.88□□□□□ -1.95
DEF1P35732 TFB1YDR311W 1929 nt2.88□□□□□ -1.95
DEF1P35732 RBK1YCR036W 1002 nt2.88□□□□□ -1.95
DEF1P35732 NPC2YDL046W 522 nt2.88□□□□□ -1.95
DEF1P35732 RPS17BYDR447C 411 nt2.88□□□□□ -1.95
DEF1P35732 RPS22AYJL190C 393 nt2.88□□□□□ -1.95
DEF1P35732 MBB1YJL199C 327 nt2.88□□□□□ -1.95
DEF1P35732 YMR324CYMR324C 243 nt2.88□□□□□ -1.95
DEF1P35732 SRO77YBL106C 3033 nt2.87□□□□□ -1.95
DEF1P35732 SPF1YEL031W 3648 nt2.87□□□□□ -1.95
DEF1P35732 RPL23BYER117W 414 nt2.87□□□□□ -1.95
DEF1P35732 RPS27AYKL156W 249 nt2.87□□□□□ -1.95
DEF1P35732 YLR120W-AYLR120W-A 102 nt2.87□□□□□ -1.95
DEF1P35732 HFM1YGL251C 3564 nt2.87□□□□□ -1.95
DEF1P35732 EDS1YBR033W 2760 nt2.87□□□□□ -1.95
DEF1P35732 HEH2YDR458C 1992 nt2.87□□□□□ -1.95
DEF1P35732 YBT1YLL048C 4986 nt2.87□□□□□ -1.95
DEF1P35732 SWA2YDR320C 2007 nt2.86□□□□□ -1.95
DEF1P35732 CSE2YNR010W 450 nt2.86□□□□□ -1.95
DEF1P35732 LRE1YCL051W 1752 nt2.85□□□□□ -1.95
DEF1P35732 YGL217CYGL217C 342 nt2.85□□□□□ -1.95
DEF1P35732 LSO2YGR169C-A 279 nt2.85□□□□□ -1.95
DEF1P35732 UPS1YLR193C 528 nt2.85□□□□□ -1.95
DEF1P35732 YBR224WYBR224W 516 nt2.85□□□□□ -1.95
DEF1P35732 POL3YDL102W 3294 nt2.85□□□□□ -1.95
DEF1P35732 TOR1YJR066W 7413 nt2.85□□□□□ -1.95
DEF1P35732 SSE1YPL106C 2082 nt2.84□□□□□ -1.95
DEF1P35732 COG3YER157W 2406 nt2.84□□□□□ -1.95
DEF1P35732 APC2YLR127C 2562 nt2.84□□□□□ -1.95
DEF1P35732 QCR7YDR529C 384 nt2.84□□□□□ -1.95
DEF1P35732 VTC1YER072W 390 nt2.84□□□□□ -1.95
DEF1P35732 RPL6AYML073C 531 nt2.84□□□□□ -1.95
DEF1P35732 YHL005CYHL005C 393 nt2.83□□□□□ -1.96
DEF1P35732 YIL059CYIL059C 366 nt2.83□□□□□ -1.96
DEF1P35732 YLR154W-EYLR154W-E 204 nt2.83□□□□□ -1.96
DEF1P35732 RRT15YLR162W-A 189 nt2.83□□□□□ -1.96
DEF1P35732 ESL2YKR096W 3588 nt2.83□□□□□ -1.96
DEF1P35732 YIL080WYIL080W 4722 nt2.83□□□□□ -1.96
DEF1P35732 NMD2YHR077C 3270 nt2.83□□□□□ -1.96
DEF1P35732 SKP2YNL311C 2292 nt2.82□□□□□ -1.96
DEF1P35732 SNU114YKL173W 3027 nt2.82□□□□□ -1.96
DEF1P35732 RLF2YPR018W 1821 nt2.82□□□□□ -1.96
DEF1P35732 FIR1YER032W 2631 nt2.82□□□□□ -1.96
DEF1P35732 YBL109WYBL109W 336 nt2.82□□□□□ -1.96
DEF1P35732 snR52snR52 92 nt2.82□□□□□ -1.96
DEF1P35732 STH1YIL126W 4080 nt2.82□□□□□ -1.96
DEF1P35732 APC11YDL008W 498 nt2.81□□□□□ -1.96
DEF1P35732 SMD1YGR074W 441 nt2.81□□□□□ -1.96
DEF1P35732 COX14YML129C 213 nt2.81□□□□□ -1.96
DEF1P35732 VMA9YCL005W-A 222 nt2.81□□□□□ -1.96
DEF1P35732 YDR186CYDR186C 2634 nt2.81□□□□□ -1.96
DEF1P35732 DIS3YOL021C 3006 nt2.81□□□□□ -1.96
DEF1P35732 MDM1YML104C 3384 nt2.8□□□□□ -1.96
DEF1P35732 KAR3YPR141C 2190 nt2.8□□□□□ -1.96
DEF1P35732 NCL1YBL024W 2055 nt2.8□□□□□ -1.96
DEF1P35732 YDR426CYDR426C 378 nt2.8□□□□□ -1.96
DEF1P35732 TIM9YEL020W-A 264 nt2.8□□□□□ -1.96
DEF1P35732 YDR261W-BYDR261W-B 5313 nt2.8□□□□□ -1.96
DEF1P35732 YFL002W-AYFL002W-A 5313 nt2.8□□□□□ -1.96
DEF1P35732 YGR161W-BYGR161W-B 5313 nt2.8□□□□□ -1.96
DEF1P35732 YCL019WYCL019W 5313 nt2.8□□□□□ -1.96
DEF1P35732 YOL057WYOL057W 2136 nt2.8□□□□□ -1.96
DEF1P35732 MRD1YPR112C 2664 nt2.79□□□□□ -1.96
DEF1P35732 PDE2YOR360C 1581 nt2.79□□□□□ -1.96
DEF1P35732 MDM20YOL076W 2391 nt2.79□□□□□ -1.96
DEF1P35732 RPL34BYIL052C 366 nt2.79□□□□□ -1.96
DEF1P35732 YIL174WYIL174W 228 nt2.79□□□□□ -1.96
DEF1P35732 YJL222W-AYJL222W-A 228 nt2.79□□□□□ -1.96
DEF1P35732 RPL38YLR325C 237 nt2.79□□□□□ -1.96
DEF1P35732 CUL3YGR003W 2235 nt2.78□□□□□ -1.96
DEF1P35732 KSP1YHR082C 3090 nt2.78□□□□□ -1.96
DEF1P35732 SSS1YDR086C 243 nt2.78□□□□□ -1.96
DEF1P35732 YML007C-AYML007C-A 111 nt2.78□□□□□ -1.96
DEF1P35732 YNL097C-BYNL097C-B 123 nt2.78□□□□□ -1.96
DEF1P35732 RPS12YOR369C 432 nt2.78□□□□□ -1.96
DEF1P35732 YBR131C-AYBR131C-A 90 nt2.78□□□□□ -1.96
DEF1P35732 CDC27YBL084C 2277 nt2.77□□□□□ -1.97
Retrieved 100 of 7,029 protein–RNA pairs in 10.1 ms