Protein–RNA interactions for Protein: P12956

XRCC6, X-ray repair cross-complementing protein 6, humanhuman

Known RBP eCLIP

Length 609 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC6P12956 MAPK12-204ENST00000467891 2019 ntTSL 537.1■■■■□ 3.532e-8■□□□□ 8.7
XRCC6P12956 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.652e-8■□□□□ 8.7
XRCC6P12956 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC26.94■■□□□ 1.92e-8■□□□□ 8.7
XRCC6P12956 MAPK12-206ENST00000488504 1785 ntTSL 525.85■■□□□ 1.732e-8■□□□□ 8.7
XRCC6P12956 MAPK12-205ENST00000482969 2101 ntTSL 221.94■■□□□ 1.12e-8■□□□□ 8.7
XRCC6P12956 MAPK12-209ENST00000497036 6248 ntTSL 220.96■□□□□ 0.952e-8■□□□□ 8.7
XRCC6P12956 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC16.18■□□□□ 0.182e-8■□□□□ 8.7
XRCC6P12956 DAZAP1-207ENST00000589484 3414 ntTSL 216.01■□□□□ 0.157e-11■□□□□ 8.7
XRCC6P12956 DAZAP1-203ENST00000585485 3943 ntTSL 215.44■□□□□ 0.067e-11■□□□□ 8.7
XRCC6P12956 RALBP1-205ENST00000585015 945 ntTSL 327.2■■□□□ 1.943e-15■□□□□ 8.7
XRCC6P12956 SLC4A2-218ENST00000494125 782 ntTSL 226.97■■□□□ 1.913e-15■□□□□ 8.7
XRCC6P12956 SLC4A2-213ENST00000483786 571 ntTSL 419.35■□□□□ 0.693e-15■□□□□ 8.7
XRCC6P12956 SLC4A2-206ENST00000466368 548 ntTSL 416.98■□□□□ 0.313e-15■□□□□ 8.7
XRCC6P12956 RALBP1-202ENST00000383432 4224 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.073e-15■□□□□ 8.7
XRCC6P12956 RALBP1-201ENST00000019317 4368 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.283e-15■□□□□ 8.7
XRCC6P12956 RALBP1-206ENST00000609094 3676 ntTSL 2 BASIC9.6□□□□□ -0.873e-15■□□□□ 8.7
XRCC6P12956 RPL7A-203ENST00000426651 1057 ntTSL 521.92■■□□□ 1.13e-19■□□□□ 8.7
XRCC6P12956 RPL7A-209ENST00000496554 947 ntTSL 219.93■□□□□ 0.783e-19■□□□□ 8.7
XRCC6P12956 RPL7A-205ENST00000468019 941 ntTSL 214.48□□□□□ -0.093e-19■□□□□ 8.7
XRCC6P12956 RPL7A-206ENST00000485706 743 ntTSL 214.06□□□□□ -0.163e-19■□□□□ 8.7
XRCC6P12956 RPL7A-207ENST00000489392 966 ntTSL 511.55□□□□□ -0.563e-19■□□□□ 8.7
XRCC6P12956 RPL7A-201ENST00000315731 680 ntTSL 2 BASIC10.13□□□□□ -0.793e-19■□□□□ 8.7
XRCC6P12956 RPL7A-202ENST00000323345 891 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.183e-19■□□□□ 8.7
XRCC6P12956 RPL7A-204ENST00000463740 1164 ntTSL 57.16□□□□□ -1.263e-19■□□□□ 8.7
XRCC6P12956 SNORD24-201ENST00000383884 75 ntBASIC1.75□□□□□ -2.133e-19■□□□□ 8.7
XRCC6P12956 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC28.52■■■□□ 2.161e-10■□□□□ 8.7
XRCC6P12956 RANBP1-210ENST00000435265 1879 ntTSL 221.99■■□□□ 1.111e-10■□□□□ 8.7
XRCC6P12956 RANBP1-207ENST00000423859 832 ntTSL 320.47■□□□□ 0.871e-10■□□□□ 8.7
XRCC6P12956 RANBP1-205ENST00000418705 932 ntTSL 318.43■□□□□ 0.541e-10■□□□□ 8.7
XRCC6P12956 RANBP1-203ENST00000411892 584 ntTSL 216.58■□□□□ 0.241e-10■□□□□ 8.7
XRCC6P12956 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC16.29■□□□□ 0.21e-10■□□□□ 8.7
XRCC6P12956 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.151e-10■□□□□ 8.7
XRCC6P12956 RPL13A-212ENST00000488946 2312 ntTSL 217.42■□□□□ 0.385e-18■□□□□ 8.7
XRCC6P12956 RPL13A-214ENST00000624069 1122 ntTSL 1 (best)16.7■□□□□ 0.265e-18■□□□□ 8.7
XRCC6P12956 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.115e-18■□□□□ 8.7
XRCC6P12956 RPL13A-213ENST00000621674 1098 ntTSL 5 BASIC15.38■□□□□ 0.055e-18■□□□□ 8.7
XRCC6P12956 PGGHG-206ENST00000476372 2879 ntTSL 220.51■□□□□ 0.872e-22■□□□□ 8.6
XRCC6P12956 ZKSCAN1-202ENST00000426572 2011 ntTSL 2 BASIC15.85■□□□□ 0.134e-6■□□□□ 8.6
XRCC6P12956 ZKSCAN1-205ENST00000535170 8758 ntTSL 2 BASIC12.26□□□□□ -0.454e-6■□□□□ 8.6
XRCC6P12956 ZKSCAN1-206ENST00000620510 9192 ntTSL 5 BASIC11.77□□□□□ -0.534e-6■□□□□ 8.6
XRCC6P12956 AKR1C1-203ENST00000442997 744 ntTSL 311.66□□□□□ -0.544e-6■□□□□ 8.6
XRCC6P12956 ZKSCAN1-201ENST00000324306 9418 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.674e-6■□□□□ 8.6
XRCC6P12956 AKR1C1-202ENST00000380872 6705 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.964e-6■□□□□ 8.6
XRCC6P12956 AKR1C1-205ENST00000477661 2637 ntTSL 58.98□□□□□ -0.974e-6■□□□□ 8.6
XRCC6P12956 UTRN-206ENST00000421035 572 ntTSL 28.13□□□□□ -1.114e-6■□□□□ 8.6
XRCC6P12956 UTRN-213ENST00000628146 597 ntTSL 24.56□□□□□ -1.684e-6■□□□□ 8.6
XRCC6P12956 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC4.12□□□□□ -1.754e-6■□□□□ 8.6
XRCC6P12956 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC18.27■□□□□ 0.511e-9■□□□□ 8.6
XRCC6P12956 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.451e-9■□□□□ 8.6
XRCC6P12956 ARID1A-208ENST00000532781 2583 ntTSL 1 (best)16.61■□□□□ 0.251e-9■□□□□ 8.6
XRCC6P12956 ARID1A-206ENST00000466382 2699 ntTSL 214.7□□□□□ -0.061e-9■□□□□ 8.6
XRCC6P12956 ARID1A-217ENST00000637788 3046 nt13.34□□□□□ -0.271e-9■□□□□ 8.6
XRCC6P12956 ARID1A-212ENST00000636219 7058 ntAPPRIS ALT2 TSL 513.09□□□□□ -0.311e-9■□□□□ 8.6
XRCC6P12956 ARID1A-202ENST00000374152 6460 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.741e-9■□□□□ 8.6
XRCC6P12956 ILF2-204ENST00000480213 1008 ntTSL 58.19□□□□□ -1.11e-9■□□□□ 8.6
XRCC6P12956 GIGYF1-202ENST00000464111 656 ntTSL 321.26■□□□□ 0.994e-15■□□□□ 8.6
XRCC6P12956 GIGYF1-203ENST00000471340 478 ntTSL 518.58■□□□□ 0.564e-15■□□□□ 8.6
XRCC6P12956 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.554e-15■□□□□ 8.6
XRCC6P12956 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC21.41■■□□□ 1.023e-13■□□□□ 8.6
XRCC6P12956 OAZ1-210ENST00000593012 1357 ntTSL 221.1■□□□□ 0.973e-13■□□□□ 8.6
XRCC6P12956 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC19.01■□□□□ 0.633e-13■□□□□ 8.6
XRCC6P12956 OAZ1-201ENST00000581150 1131 ntTSL 518.71■□□□□ 0.593e-13■□□□□ 8.6
XRCC6P12956 OAZ1-209ENST00000592787 857 ntTSL 218.21■□□□□ 0.513e-13■□□□□ 8.6
XRCC6P12956 OAZ1-207ENST00000590943 1012 ntTSL 217.98■□□□□ 0.473e-13■□□□□ 8.6
XRCC6P12956 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.678e-7■□□□□ 8.6
XRCC6P12956 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.638e-7■□□□□ 8.6
XRCC6P12956 TPM3-220ENST00000509601 543 ntTSL 420.01■□□□□ 0.799e-13■□□□□ 8.6
XRCC6P12956 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC18.27■□□□□ 0.519e-13■□□□□ 8.6
XRCC6P12956 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC17.76■□□□□ 0.439e-13■□□□□ 8.6
XRCC6P12956 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC17.46■□□□□ 0.399e-13■□□□□ 8.6
XRCC6P12956 TPM3-219ENST00000509409 1248 ntTSL 217.09■□□□□ 0.339e-13■□□□□ 8.6
XRCC6P12956 TPM3-211ENST00000368531 1115 ntTSL 1 (best) BASIC15.49■□□□□ 0.079e-13■□□□□ 8.6
XRCC6P12956 TPM3-223ENST00000611659 3149 ntTSL 3 BASIC15.23■□□□□ 0.039e-13■□□□□ 8.6
XRCC6P12956 TPM3-216ENST00000473036 746 ntTSL 214.62□□□□□ -0.079e-13■□□□□ 8.6
XRCC6P12956 TPM3-202ENST00000302206 741 ntTSL 3 BASIC13.88□□□□□ -0.199e-13■□□□□ 8.6
XRCC6P12956 TPM3-204ENST00000323144 1088 ntTSL 2 BASIC13.63□□□□□ -0.239e-13■□□□□ 8.6
XRCC6P12956 TPM3-212ENST00000368533 3131 ntTSL 1 (best) BASIC13.18□□□□□ -0.39e-13■□□□□ 8.6
XRCC6P12956 TPM3-209ENST00000368527 569 ntTSL 412.35□□□□□ -0.439e-13■□□□□ 8.6
XRCC6P12956 BRD8-222ENST00000506167 1363 ntTSL 512.14□□□□□ -0.479e-13■□□□□ 8.6
XRCC6P12956 TPM3-207ENST00000341372 2007 ntTSL 5 BASIC11.4□□□□□ -0.589e-13■□□□□ 8.6
XRCC6P12956 TPM3-210ENST00000368530 1523 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.619e-13■□□□□ 8.6
XRCC6P12956 TPM3-218ENST00000505010 540 ntTSL 210.36□□□□□ -0.759e-13■□□□□ 8.6
XRCC6P12956 BRD8-202ENST00000254900 4388 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.759e-13■□□□□ 8.6
XRCC6P12956 TPM3-215ENST00000469717 4041 ntTSL 210.29□□□□□ -0.769e-13■□□□□ 8.6
XRCC6P12956 BRD8-203ENST00000402931 2982 ntTSL 5 BASIC10.21□□□□□ -0.789e-13■□□□□ 8.6
XRCC6P12956 BRD8-201ENST00000230901 3198 ntTSL 1 (best) BASIC10.21□□□□□ -0.789e-13■□□□□ 8.6
XRCC6P12956 TPM3-201ENST00000271850 1219 ntAPPRIS ALT1 TSL 5 BASIC9.9□□□□□ -0.829e-13■□□□□ 8.6
XRCC6P12956 BRD8-204ENST00000411594 2967 ntTSL 5 BASIC9.6□□□□□ -0.879e-13■□□□□ 8.6
XRCC6P12956 BRD8-220ENST00000483805 543 ntTSL 29.51□□□□□ -0.899e-13■□□□□ 8.6
XRCC6P12956 BRD8-224ENST00000512140 2876 ntTSL 29.34□□□□□ -0.919e-13■□□□□ 8.6
XRCC6P12956 TPM3-203ENST00000312970 750 ntTSL 59.06□□□□□ -0.969e-13■□□□□ 8.6
XRCC6P12956 BRD8-223ENST00000511898 586 ntTSL 58.58□□□□□ -1.049e-13■□□□□ 8.6
XRCC6P12956 BRD8-214ENST00000454473 3005 ntTSL 58.43□□□□□ -1.069e-13■□□□□ 8.6
XRCC6P12956 BRD8-205ENST00000418329 2912 ntTSL 58.23□□□□□ -1.099e-13■□□□□ 8.6
XRCC6P12956 BRD8-211ENST00000441656 2899 ntTSL 57.93□□□□□ -1.149e-13■□□□□ 8.6
XRCC6P12956 BRD8-216ENST00000463620 764 ntTSL 27.86□□□□□ -1.159e-13■□□□□ 8.6
XRCC6P12956 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC26.21■■□□□ 1.794e-9■□□□□ 8.5
XRCC6P12956 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.534e-9■□□□□ 8.5
XRCC6P12956 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC23.6■■□□□ 1.374e-9■□□□□ 8.5
XRCC6P12956 LRCH4-202ENST00000467201 4754 ntTSL 218.59■□□□□ 0.574e-9■□□□□ 8.5
Retrieved 100 of 6,788 protein–RNA pairs in 231 ms