RNA–Protein interactions for RNA: ENST00000494125.1

SLC4A2-218, Transcript of solute carrier family 4 member 2, humanhuman

TSL 2

Gene SLC4A2, Length 782 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC4A2-218ENST00000494125 NISCHQ9Y2I1 1504 aa59.66■■■■■ 7.14
SLC4A2-218ENST00000494125 CCDC180Q9P1Z9 1646 aa53.17■■■■■ 6.1
SLC4A2-218ENST00000494125 ABCC9O60706 1549 aa52.85■■■■■ 6.05
SLC4A2-218ENST00000494125 RB1CC1Q8TDY2 1594 aa50.43■■■■■ 5.66
SLC4A2-218ENST00000494125 DCAF8L2P0C7V8 631 aa50.4■■■■■ 5.66
SLC4A2-218ENST00000494125 NACADO15069 1562 aa50.21■■■■■ 5.63
SLC4A2-218ENST00000494125 MYO15BQ96JP2 1530 aa49.64■■■■■ 5.54
SLC4A2-218ENST00000494125 ZCCHC6Q5VYS8 1495 aaKnown RBP49.52■■■■■ 5.52
SLC4A2-218ENST00000494125 PABPN1Q86U42 306 aaKnown RBP eCLIP49.39■■■■■ 5.5
SLC4A2-218ENST00000494125 UNC13AQ9UPW8 1703 aa49.24■■■■■ 5.47
SLC4A2-218ENST00000494125 DCAF1Q9Y4B6 1507 aa49.23■■■■■ 5.47
SLC4A2-218ENST00000494125 DNAJC5BQ9UF47 199 aa49.15■■■■■ 5.46
SLC4A2-218ENST00000494125 BICRAQ9NZM4 1560 aa48.94■■■■■ 5.42
SLC4A2-218ENST00000494125 SCRIBQ14160 1630 aa48.62■■■■■ 5.37
SLC4A2-218ENST00000494125 SHROOM4Q9ULL8 1493 aa48.23■■■■■ 5.31
SLC4A2-218ENST00000494125 EIF4G1Q04637 1599 aaKnown RBP47.71■■■■■ 5.23
SLC4A2-218ENST00000494125 CC2D2AQ9P2K1 1620 aa47.69■■■■■ 5.22
SLC4A2-218ENST00000494125 CECR2Q9BXF3 1484 aa47.51■■■■■ 5.2
SLC4A2-218ENST00000494125 SMARCA4P51532 1647 aa46.39■■■■■ 5.02
SLC4A2-218ENST00000494125 NCAPD3P42695 1498 aa46.38■■■■■ 5.02
SLC4A2-218ENST00000494125 ATAD2BQ9ULI0 1458 aa46.35■■■■■ 5.01
SLC4A2-218ENST00000494125 BAZ1AQ9NRL2 1556 aaPredicted RBP46.25■■■■■ 4.99
SLC4A2-218ENST00000494125 SMARCA2P51531 1590 aa46.2■■■■■ 4.99
SLC4A2-218ENST00000494125 HMGXB3Q12766 1538 aa46.03■■■■■ 4.96
SLC4A2-218ENST00000494125 MROH2BQ7Z745 1585 aa46.01■■■■■ 4.96
SLC4A2-218ENST00000494125 BAZ1BQ9UIG0 1483 aaKnown RBP45.93■■■■■ 4.94
SLC4A2-218ENST00000494125 PEG3Q9GZU2 1588 aa45.88■■■■■ 4.93
SLC4A2-218ENST00000494125 ERCC6Q03468 1493 aa45.57■■■■■ 4.89
SLC4A2-218ENST00000494125 NESP48681 1621 aa45.54■■■■■ 4.88
SLC4A2-218ENST00000494125 WIZO95785 1651 aa45.48■■■■■ 4.87
SLC4A2-218ENST00000494125 RSF1Q96T23 1441 aaPredicted RBP45.27■■■■■ 4.84
SLC4A2-218ENST00000494125 LAMC3Q9Y6N6 1575 aa45.21■■■■■ 4.83
SLC4A2-218ENST00000494125 CUX2O14529 1486 aa45.21■■■■■ 4.83
SLC4A2-218ENST00000494125 CADPSQ9ULU8 1353 aa45.06■■■■■ 4.8
SLC4A2-218ENST00000494125 PDS5BQ9NTI5 1447 aa45.01■■■■■ 4.8
SLC4A2-218ENST00000494125 TOP2AP11388 1531 aaKnown RBP44.89■■■■■ 4.78
SLC4A2-218ENST00000494125 KIF21AQ7Z4S6 1674 aa44.88■■■■■ 4.78
SLC4A2-218ENST00000494125 THOC2Q8NI27 1593 aaKnown RBP44.85■■■■■ 4.77
SLC4A2-218ENST00000494125 DNAJC5Q9H3Z4 198 aa44.68■■■■■ 4.74
SLC4A2-218ENST00000494125 CFTRP13569 1480 aa44.61■■■■■ 4.73
SLC4A2-218ENST00000494125 MRC2Q9UBG0 1479 aa44.55■■■■■ 4.72
SLC4A2-218ENST00000494125 FANCD2Q9BXW9 1451 aa44.53■■■■■ 4.72
SLC4A2-218ENST00000494125 CEP164Q9UPV0 1460 aa44.5■■■■■ 4.71
SLC4A2-218ENST00000494125 CCDC88BA6NC98 1476 aa44.47■■■■■ 4.71
SLC4A2-218ENST00000494125 WDR62O43379 1518 aa44.38■■■■■ 4.69
SLC4A2-218ENST00000494125 URB2Q14146 1524 aaKnown RBP44.11■■■■■ 4.65
SLC4A2-218ENST00000494125 PRDM2Q13029 1718 aa44.08■■■■■ 4.65
SLC4A2-218ENST00000494125 SUPT5HO00267 1087 aaKnown RBP43.88■■■■■ 4.62
SLC4A2-218ENST00000494125 TOPBP1Q92547 1522 aa43.73■■■■■ 4.59
SLC4A2-218ENST00000494125 ABCC8Q09428 1581 aa43.65■■■■■ 4.58
SLC4A2-218ENST00000494125 IFT140Q96RY7 1462 aa43.58■■■■■ 4.57
SLC4A2-218ENST00000494125 DNMBPQ6XZF7 1577 aa43.58■■■■■ 4.57
SLC4A2-218ENST00000494125 ZNF608Q9ULD9 1512 aaPredicted RBP43.51■■■■■ 4.56
SLC4A2-218ENST00000494125 OSCARQ8IYS5 282 aa43.4■■■■■ 4.54
SLC4A2-218ENST00000494125 POLA1P09884 1462 aaPredicted RBP43.32■■■■■ 4.52
SLC4A2-218ENST00000494125 TARBP1Q13395 1621 aaKnown RBP43.25■■■■■ 4.51
SLC4A2-218ENST00000494125 AQRO60306 1485 aaKnown RBP eCLIP43.23■■■■■ 4.512e-8■■■■■ 28.9
SLC4A2-218ENST00000494125 RAD54L2Q9Y4B4 1467 aa43.22■■■■■ 4.51
SLC4A2-218ENST00000494125 SOGA1O94964 1423 aa43.21■■■■■ 4.51
SLC4A2-218ENST00000494125 EIF4G3O43432 1585 aaKnown RBP43.2■■■■■ 4.51
SLC4A2-218ENST00000494125 CUX1P39880 1505 aa43.18■■■■■ 4.5
SLC4A2-218ENST00000494125 FGD5Q6ZNL6 1462 aa43.14■■■■■ 4.5
SLC4A2-218ENST00000494125 TDRD9Q8NDG6 1382 aaKnown RBP43.07■■■■■ 4.49
SLC4A2-218ENST00000494125 TRIM41Q8WV44 630 aa43.06■■■■■ 4.48
SLC4A2-218ENST00000494125 FBLN2P98095 1184 aa42.94■■■■■ 4.46
SLC4A2-218ENST00000494125 CHD1O14646 1710 aa42.79■■■■■ 4.44
SLC4A2-218ENST00000494125 WDR97A6NE52 1622 aa42.77■■■■■ 4.44
SLC4A2-218ENST00000494125 SNAPC4Q5SXM2 1469 aa42.74■■■■■ 4.43
SLC4A2-218ENST00000494125 WRNQ14191 1432 aaPredicted RBP eCLIP42.71■■■■■ 4.43
SLC4A2-218ENST00000494125 GRIN2BQ13224 1484 aa42.7■■■■■ 4.43
SLC4A2-218ENST00000494125 CHMP7Q8WUX9 453 aaPredicted RBP42.66■■■■■ 4.42
SLC4A2-218ENST00000494125 ABCA10Q8WWZ4 1543 aa42.66■■■■■ 4.42
SLC4A2-218ENST00000494125 GAPVD1Q14C86 1478 aa42.65■■■■■ 4.42
SLC4A2-218ENST00000494125 RIMBP3CA6NJZ7 1639 aa42.64■■■■■ 4.42
SLC4A2-218ENST00000494125 RIMBP3BA6NNM3 1639 aa42.64■■■■■ 4.42
SLC4A2-218ENST00000494125 RIMBP3Q9UFD9 1639 aa42.64■■■■■ 4.42
SLC4A2-218ENST00000494125 MAGI1Q96QZ7 1491 aaPredicted RBP42.61■■■■■ 4.41
SLC4A2-218ENST00000494125 TOP2BQ02880 1626 aa42.6■■■■■ 4.41
SLC4A2-218ENST00000494125 SYNJ1O43426 1573 aa42.59■■■■■ 4.41
SLC4A2-218ENST00000494125 ARHGEF11O15085 1522 aa42.57■■■■■ 4.41
SLC4A2-218ENST00000494125 BIVM-ERCC5R4GMW8 1640 aa42.57■■■■■ 4.4
SLC4A2-218ENST00000494125 PBRM1Q86U86 1689 aa42.5■■■■■ 4.39
SLC4A2-218ENST00000494125 ABCA5Q8WWZ7 1642 aa42.49■■■■■ 4.39
SLC4A2-218ENST00000494125 SYNJ2O15056 1496 aa42.48■■■■■ 4.39
SLC4A2-218ENST00000494125 CYB5RLQ6IPT4 315 aa42.39■■■■■ 4.38
SLC4A2-218ENST00000494125 CLASP1Q7Z460 1538 aa42.3■■■■■ 4.36
SLC4A2-218ENST00000494125 ARAP1Q96P48 1450 aa42.21■■■■■ 4.35
SLC4A2-218ENST00000494125 GRIN2AQ12879 1464 aa42.14■■■■■ 4.34
SLC4A2-218ENST00000494125 ADAMTS12P58397 1594 aa42.14■■■■■ 4.34
SLC4A2-218ENST00000494125 FHAD1B1AJZ9 1412 aa42.12■■■■■ 4.33
SLC4A2-218ENST00000494125 ERICH3Q5RHP9 1530 aa42.1■■■■■ 4.33
SLC4A2-218ENST00000494125 NUP160Q12769 1436 aa41.96■■■■■ 4.31
SLC4A2-218ENST00000494125 CEP170Q5SW79 1584 aa41.95■■■■■ 4.31
SLC4A2-218ENST00000494125 KIF27Q86VH2 1401 aa41.86■■■■■ 4.29
SLC4A2-218ENST00000494125 IGF1RP08069 1367 aa41.81■■■■■ 4.28
SLC4A2-218ENST00000494125 TRHP20396 242 aaPredicted RBP41.77■■■■■ 4.28
SLC4A2-218ENST00000494125 ERCC6L2Q5T890 1561 aa41.76■■■■■ 4.28
SLC4A2-218ENST00000494125 JPH4Q96JJ6 628 aa41.68■■■■■ 4.26
SLC4A2-218ENST00000494125 SHROOM2Q13796 1616 aa41.66■■■■■ 4.26
SLC4A2-218ENST00000494125 PRG4Q92954 1404 aaPredicted RBP41.6■■■■■ 4.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms