RNA–Protein interactions for RNA: ENST00000532781.1

ARID1A-208, Transcript of AT-rich interaction domain 1A, humanhuman

TSL 1 (best)

Gene ARID1A, Length 2,583 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARID1A-208ENST00000532781 NISCHQ9Y2I1 1504 aa30.79■■■□□ 2.52
ARID1A-208ENST00000532781 CCDC180Q9P1Z9 1646 aa26.47■■□□□ 1.83
ARID1A-208ENST00000532781 SHROOM4Q9ULL8 1493 aa25.94■■□□□ 1.74
ARID1A-208ENST00000532781 ZCCHC6Q5VYS8 1495 aaKnown RBP25.9■■□□□ 1.74
ARID1A-208ENST00000532781 DCAF8L2P0C7V8 631 aa25.85■■□□□ 1.73
ARID1A-208ENST00000532781 ABCC9O60706 1549 aa25.23■■□□□ 1.63
ARID1A-208ENST00000532781 DCAF1Q9Y4B6 1507 aa25.15■■□□□ 1.62
ARID1A-208ENST00000532781 SUPT5HO00267 1087 aaKnown RBP25.06■■□□□ 1.6
ARID1A-208ENST00000532781 SCRIBQ14160 1630 aa24.84■■□□□ 1.57
ARID1A-208ENST00000532781 MYO15BQ96JP2 1530 aa24.64■■□□□ 1.53
ARID1A-208ENST00000532781 NACADO15069 1562 aa24.6■■□□□ 1.53
ARID1A-208ENST00000532781 RB1CC1Q8TDY2 1594 aa24.38■■□□□ 1.49
ARID1A-208ENST00000532781 UNC13AQ9UPW8 1703 aa24.17■■□□□ 1.46
ARID1A-208ENST00000532781 CECR2Q9BXF3 1484 aa24.15■■□□□ 1.46
ARID1A-208ENST00000532781 RSF1Q96T23 1441 aaPredicted RBP24.12■■□□□ 1.45
ARID1A-208ENST00000532781 PABPN1Q86U42 306 aaKnown RBP eCLIP24■■□□□ 1.43
ARID1A-208ENST00000532781 MROH2BQ7Z745 1585 aa23.97■■□□□ 1.43
ARID1A-208ENST00000532781 CHIC1Q5VXU3 224 aa23.96■■□□□ 1.43
ARID1A-208ENST00000532781 WIZO95785 1651 aa23.86■■□□□ 1.41
ARID1A-208ENST00000532781 BICRAQ9NZM4 1560 aa23.82■■□□□ 1.4
ARID1A-208ENST00000532781 BAZ1AQ9NRL2 1556 aaPredicted RBP23.67■■□□□ 1.38
ARID1A-208ENST00000532781 SMARCA4P51532 1647 aa23.62■■□□□ 1.37
ARID1A-208ENST00000532781 TOP2AP11388 1531 aaKnown RBP23.36■■□□□ 1.33
ARID1A-208ENST00000532781 LOC105371045A0A1W2PR82 267 aa23.32■■□□□ 1.32
ARID1A-208ENST00000532781 TRIM41Q8WV44 630 aa23.3■■□□□ 1.32
ARID1A-208ENST00000532781 CCDC88BA6NC98 1476 aa23.28■■□□□ 1.32
ARID1A-208ENST00000532781 SMARCA2P51531 1590 aa23.26■■□□□ 1.31
ARID1A-208ENST00000532781 FAM9AQ8IZU1 332 aaPredicted RBP23.23■■□□□ 1.31
ARID1A-208ENST00000532781 EIF4G1Q04637 1599 aaKnown RBP23.17■■□□□ 1.3
ARID1A-208ENST00000532781 EHMT2Q96KQ7 1210 aa23.16■■□□□ 1.3
ARID1A-208ENST00000532781 ATAD2BQ9ULI0 1458 aa23.15■■□□□ 1.3
ARID1A-208ENST00000532781 PEG3Q9GZU2 1588 aa23.12■■□□□ 1.29
ARID1A-208ENST00000532781 ABCC8Q09428 1581 aa23.1■■□□□ 1.29
ARID1A-208ENST00000532781 BAZ1BQ9UIG0 1483 aaKnown RBP23.06■■□□□ 1.28
ARID1A-208ENST00000532781 NCAPD3P42695 1498 aa22.76■■□□□ 1.23
ARID1A-208ENST00000532781 HMGXB3Q12766 1538 aa22.71■■□□□ 1.23
ARID1A-208ENST00000532781 SOGA1O94964 1423 aa22.7■■□□□ 1.22
ARID1A-208ENST00000532781 CC2D2AQ9P2K1 1620 aa22.68■■□□□ 1.22
ARID1A-208ENST00000532781 RUSC2Q8N2Y8 1516 aa22.67■■□□□ 1.22
ARID1A-208ENST00000532781 SYNJ1O43426 1573 aa22.67■■□□□ 1.22
ARID1A-208ENST00000532781 WRNQ14191 1432 aaPredicted RBP eCLIP22.67■■□□□ 1.22
ARID1A-208ENST00000532781 PCGF6Q9BYE7 350 aa22.58■■□□□ 1.21
ARID1A-208ENST00000532781 DNAJC5BQ9UF47 199 aa22.45■■□□□ 1.18
ARID1A-208ENST00000532781 CFTRP13569 1480 aa22.42■■□□□ 1.18
ARID1A-208ENST00000532781 PPARGC1BQ86YN6 1023 aaKnown RBP22.41■■□□□ 1.18
ARID1A-208ENST00000532781 CSRNP3Q8WYN3 585 aa22.41■■□□□ 1.18
ARID1A-208ENST00000532781 TOP2BQ02880 1626 aa22.37■■□□□ 1.17
ARID1A-208ENST00000532781 CUX1P39880 1505 aa22.35■■□□□ 1.17
ARID1A-208ENST00000532781 UBTFP17480 764 aaKnown RBP22.32■■□□□ 1.16
ARID1A-208ENST00000532781 BIVM-ERCC5R4GMW8 1640 aa22.3■■□□□ 1.16
ARID1A-208ENST00000532781 CADPSQ9ULU8 1353 aa22.3■■□□□ 1.16
ARID1A-208ENST00000532781 NESP48681 1621 aa22.3■■□□□ 1.16
ARID1A-208ENST00000532781 PRDM2Q13029 1718 aa22.27■■□□□ 1.16
ARID1A-208ENST00000532781 EEA1Q15075 1411 aa22.25■■□□□ 1.15
ARID1A-208ENST00000532781 RANGAP1P46060 587 aaPredicted RBP22.22■■□□□ 1.15
ARID1A-208ENST00000532781 CEP162Q5TB80 1403 aa22.21■■□□□ 1.15
ARID1A-208ENST00000532781 TTBK1Q5TCY1 1321 aaPredicted RBP22.2■■□□□ 1.14
ARID1A-208ENST00000532781 TRIM26Q12899 539 aaPredicted RBP22.18■■□□□ 1.14
ARID1A-208ENST00000532781 GOLGA3Q08378 1498 aa22.18■■□□□ 1.14
ARID1A-208ENST00000532781 RAPGEF2Q9Y4G8 1499 aa22.16■■□□□ 1.14
ARID1A-208ENST00000532781 TNIKQ9UKE5 1360 aa22.15■■□□□ 1.14
ARID1A-208ENST00000532781 FANCD2Q9BXW9 1451 aa22.13■■□□□ 1.13
ARID1A-208ENST00000532781 CEP164Q9UPV0 1460 aa22.11■■□□□ 1.13
ARID1A-208ENST00000532781 KIF21BO75037 1637 aa22.1■■□□□ 1.13
ARID1A-208ENST00000532781 FGD5Q6ZNL6 1462 aa22.05■■□□□ 1.12
ARID1A-208ENST00000532781 HRCP23327 699 aa22■■□□□ 1.11
ARID1A-208ENST00000532781 CUX2O14529 1486 aa22■■□□□ 1.11
ARID1A-208ENST00000532781 KIF27Q86VH2 1401 aa21.99■■□□□ 1.11
ARID1A-208ENST00000532781 RAD54L2Q9Y4B4 1467 aa21.96■■□□□ 1.11
ARID1A-208ENST00000532781 PRXQ9BXM0 1461 aa21.94■■□□□ 1.1
ARID1A-208ENST00000532781 CLIP1P30622 1438 aa21.93■■□□□ 1.1
ARID1A-208ENST00000532781 LAMC3Q9Y6N6 1575 aa21.92■■□□□ 1.1
ARID1A-208ENST00000532781 KIF21AQ7Z4S6 1674 aa21.92■■□□□ 1.1
ARID1A-208ENST00000532781 TOPBP1Q92547 1522 aa21.92■■□□□ 1.1
ARID1A-208ENST00000532781 DNMBPQ6XZF7 1577 aa21.89■■□□□ 1.09
ARID1A-208ENST00000532781 URB2Q14146 1524 aaKnown RBP21.88■■□□□ 1.09
ARID1A-208ENST00000532781 POLA1P09884 1462 aaPredicted RBP21.88■■□□□ 1.09
ARID1A-208ENST00000532781 IGF1RP08069 1367 aa21.84■■□□□ 1.09
ARID1A-208ENST00000532781 ERICH3Q5RHP9 1530 aa21.83■■□□□ 1.08
ARID1A-208ENST00000532781 PDS5BQ9NTI5 1447 aa21.77■■□□□ 1.08
ARID1A-208ENST00000532781 CARMIL1Q5VZK9 1371 aa21.74■■□□□ 1.07
ARID1A-208ENST00000532781 TDRD9Q8NDG6 1382 aaKnown RBP21.72■■□□□ 1.07
ARID1A-208ENST00000532781 VPS8Q8N3P4 1428 aa21.72■■□□□ 1.07
ARID1A-208ENST00000532781 ABCA10Q8WWZ4 1543 aa21.7■■□□□ 1.07
ARID1A-208ENST00000532781 ARAP1Q96P48 1450 aa21.7■■□□□ 1.06
ARID1A-208ENST00000532781 WDR97A6NE52 1622 aa21.65■■□□□ 1.06
ARID1A-208ENST00000532781 ARHGAP35Q9NRY4 1499 aa21.62■■□□□ 1.05
ARID1A-208ENST00000532781 P3H3Q8IVL6 736 aa21.61■■□□□ 1.05
ARID1A-208ENST00000532781 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.6■■□□□ 1.05
ARID1A-208ENST00000532781 APLP2Q06481 763 aa21.57■■□□□ 1.04
ARID1A-208ENST00000532781 ABCA5Q8WWZ7 1642 aa21.55■■□□□ 1.04
ARID1A-208ENST00000532781 TARBP1Q13395 1621 aaKnown RBP21.54■■□□□ 1.04
ARID1A-208ENST00000532781 KANK4Q5T7N3 995 aaPredicted RBP21.53■■□□□ 1.04
ARID1A-208ENST00000532781 GAPVD1Q14C86 1478 aa21.53■■□□□ 1.04
ARID1A-208ENST00000532781 MRC2Q9UBG0 1479 aa21.52■■□□□ 1.04
ARID1A-208ENST00000532781 AQRO60306 1485 aaKnown RBP eCLIP21.51■■□□□ 1.031e-9■■■■■ 30.3
ARID1A-208ENST00000532781 CUL7Q14999 1698 aa21.48■■□□□ 1.03
ARID1A-208ENST00000532781 HNRNPUL2Q1KMD3 747 aaKnown RBP21.47■■□□□ 1.03
ARID1A-208ENST00000532781 ERCC6Q03468 1493 aa21.46■■□□□ 1.03
ARID1A-208ENST00000532781 ZNF608Q9ULD9 1512 aaPredicted RBP21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms