RNA–Protein interactions for RNA: ENST00000483805.1

BRD8-220, Transcript of bromodomain containing 8, humanhuman

TSL 2

Gene BRD8, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD8-220ENST00000483805 NISCHQ9Y2I1 1504 aa21.14■□□□□ 0.98
BRD8-220ENST00000483805 CCDC180Q9P1Z9 1646 aa18.83■□□□□ 0.61
BRD8-220ENST00000483805 ABCC9O60706 1549 aa18.81■□□□□ 0.6
BRD8-220ENST00000483805 RB1CC1Q8TDY2 1594 aa17.92■□□□□ 0.46
BRD8-220ENST00000483805 NACADO15069 1562 aa17.85■□□□□ 0.45
BRD8-220ENST00000483805 DCAF8L2P0C7V8 631 aa17.85■□□□□ 0.45
BRD8-220ENST00000483805 DNAJC5BQ9UF47 199 aa17.68■□□□□ 0.42
BRD8-220ENST00000483805 MYO15BQ96JP2 1530 aa17.67■□□□□ 0.42
BRD8-220ENST00000483805 PABPN1Q86U42 306 aaKnown RBP eCLIP17.6■□□□□ 0.41
BRD8-220ENST00000483805 ZCCHC6Q5VYS8 1495 aaKnown RBP17.51■□□□□ 0.39
BRD8-220ENST00000483805 DCAF1Q9Y4B6 1507 aa17.47■□□□□ 0.39
BRD8-220ENST00000483805 UNC13AQ9UPW8 1703 aa17.45■□□□□ 0.38
BRD8-220ENST00000483805 BICRAQ9NZM4 1560 aa17.43■□□□□ 0.38
BRD8-220ENST00000483805 SHROOM4Q9ULL8 1493 aa17.18■□□□□ 0.34
BRD8-220ENST00000483805 SCRIBQ14160 1630 aa17.17■□□□□ 0.34
BRD8-220ENST00000483805 CC2D2AQ9P2K1 1620 aa16.97■□□□□ 0.31
BRD8-220ENST00000483805 EIF4G1Q04637 1599 aaKnown RBP16.96■□□□□ 0.31
BRD8-220ENST00000483805 CECR2Q9BXF3 1484 aa16.94■□□□□ 0.3
BRD8-220ENST00000483805 CHIC1Q5VXU3 224 aa16.77■□□□□ 0.28
BRD8-220ENST00000483805 AEBP2Q6ZN18 517 aaPredicted RBP16.7■□□□□ 0.26
BRD8-220ENST00000483805 NCAPD3P42695 1498 aa16.54■□□□□ 0.24
BRD8-220ENST00000483805 ATAD2BQ9ULI0 1458 aa16.48■□□□□ 0.23
BRD8-220ENST00000483805 SMARCA4P51532 1647 aa16.41■□□□□ 0.22
BRD8-220ENST00000483805 SMARCA2P51531 1590 aa16.39■□□□□ 0.21
BRD8-220ENST00000483805 BAZ1AQ9NRL2 1556 aaPredicted RBP16.37■□□□□ 0.21
BRD8-220ENST00000483805 HMGXB3Q12766 1538 aa16.35■□□□□ 0.21
BRD8-220ENST00000483805 MROH2BQ7Z745 1585 aa16.29■□□□□ 0.2
BRD8-220ENST00000483805 PEG3Q9GZU2 1588 aa16.29■□□□□ 0.2
BRD8-220ENST00000483805 BAZ1BQ9UIG0 1483 aaKnown RBP16.28■□□□□ 0.2
BRD8-220ENST00000483805 ERCC6Q03468 1493 aa16.21■□□□□ 0.19
BRD8-220ENST00000483805 NESP48681 1621 aa16.19■□□□□ 0.18
BRD8-220ENST00000483805 CUX2O14529 1486 aa16.17■□□□□ 0.18
BRD8-220ENST00000483805 DNAJC5Q9H3Z4 198 aa16.16■□□□□ 0.18
BRD8-220ENST00000483805 LAMC3Q9Y6N6 1575 aa16.07■□□□□ 0.16
BRD8-220ENST00000483805 WIZO95785 1651 aa16.05■□□□□ 0.16
BRD8-220ENST00000483805 CADPSQ9ULU8 1353 aa16.04■□□□□ 0.16
BRD8-220ENST00000483805 RSF1Q96T23 1441 aaPredicted RBP16.02■□□□□ 0.16
BRD8-220ENST00000483805 PDS5BQ9NTI5 1447 aa16.02■□□□□ 0.16
BRD8-220ENST00000483805 THOC2Q8NI27 1593 aaKnown RBP15.94■□□□□ 0.14
BRD8-220ENST00000483805 KIF21AQ7Z4S6 1674 aa15.9■□□□□ 0.14
BRD8-220ENST00000483805 CFTRP13569 1480 aa15.86■□□□□ 0.13
BRD8-220ENST00000483805 TOP2AP11388 1531 aaKnown RBP15.86■□□□□ 0.13
BRD8-220ENST00000483805 MRC2Q9UBG0 1479 aa15.84■□□□□ 0.13
BRD8-220ENST00000483805 FANCD2Q9BXW9 1451 aa15.81■□□□□ 0.12
BRD8-220ENST00000483805 CEP164Q9UPV0 1460 aa15.79■□□□□ 0.12
BRD8-220ENST00000483805 WDR62O43379 1518 aa15.78■□□□□ 0.12
BRD8-220ENST00000483805 CCDC88BA6NC98 1476 aa15.75■□□□□ 0.11
BRD8-220ENST00000483805 URB2Q14146 1524 aaKnown RBP15.68■□□□□ 0.1
BRD8-220ENST00000483805 PRDM2Q13029 1718 aa15.55■□□□□ 0.08
BRD8-220ENST00000483805 OSCARQ8IYS5 282 aa15.55■□□□□ 0.08
BRD8-220ENST00000483805 TOPBP1Q92547 1522 aa15.52■□□□□ 0.07
BRD8-220ENST00000483805 ABCC8Q09428 1581 aa15.51■□□□□ 0.07
BRD8-220ENST00000483805 IFT140Q96RY7 1462 aa15.5■□□□□ 0.07
BRD8-220ENST00000483805 ZNF608Q9ULD9 1512 aaPredicted RBP15.47■□□□□ 0.07
BRD8-220ENST00000483805 DNMBPQ6XZF7 1577 aa15.44■□□□□ 0.06
BRD8-220ENST00000483805 TRIM41Q8WV44 630 aa15.42■□□□□ 0.06
BRD8-220ENST00000483805 SUPT5HO00267 1087 aaKnown RBP15.4■□□□□ 0.06
BRD8-220ENST00000483805 AQRO60306 1485 aaKnown RBP eCLIP15.37■□□□□ 0.05
BRD8-220ENST00000483805 POLA1P09884 1462 aaPredicted RBP15.36■□□□□ 0.05
BRD8-220ENST00000483805 TARBP1Q13395 1621 aaKnown RBP15.35■□□□□ 0.05
BRD8-220ENST00000483805 SOGA1O94964 1423 aa15.34■□□□□ 0.05
BRD8-220ENST00000483805 RAD54L2Q9Y4B4 1467 aa15.33■□□□□ 0.04
BRD8-220ENST00000483805 EIF4G3O43432 1585 aaKnown RBP15.3■□□□□ 0.04
BRD8-220ENST00000483805 TDRD9Q8NDG6 1382 aaKnown RBP15.3■□□□□ 0.04
BRD8-220ENST00000483805 CUX1P39880 1505 aa15.28■□□□□ 0.04
BRD8-220ENST00000483805 FGD5Q6ZNL6 1462 aa15.27■□□□□ 0.03
BRD8-220ENST00000483805 FBLN2P98095 1184 aa15.25■□□□□ 0.03
BRD8-220ENST00000483805 RIMBP3CA6NJZ7 1639 aa15.2■□□□□ 0.02
BRD8-220ENST00000483805 RIMBP3BA6NNM3 1639 aa15.2■□□□□ 0.02
BRD8-220ENST00000483805 RIMBP3Q9UFD9 1639 aa15.2■□□□□ 0.02
BRD8-220ENST00000483805 ARHGEF11O15085 1522 aa15.18■□□□□ 0.02
BRD8-220ENST00000483805 WDR97A6NE52 1622 aa15.18■□□□□ 0.02
BRD8-220ENST00000483805 CHMP7Q8WUX9 453 aaPredicted RBP15.18■□□□□ 0.02
BRD8-220ENST00000483805 GRIN2BQ13224 1484 aa15.16■□□□□ 0.02
BRD8-220ENST00000483805 CYB5RLQ6IPT4 315 aa15.16■□□□□ 0.02
BRD8-220ENST00000483805 CHD1O14646 1710 aa15.16■□□□□ 0.02
BRD8-220ENST00000483805 SNAPC4Q5SXM2 1469 aa15.15■□□□□ 0.02
BRD8-220ENST00000483805 MAGI1Q96QZ7 1491 aaPredicted RBP15.14■□□□□ 0.01
BRD8-220ENST00000483805 GAPVD1Q14C86 1478 aa15.13■□□□□ 0.01
BRD8-220ENST00000483805 ABCA10Q8WWZ4 1543 aa15.12■□□□□ 0.01
BRD8-220ENST00000483805 WRNQ14191 1432 aaPredicted RBP eCLIP15.1■□□□□ 0.01
BRD8-220ENST00000483805 SYNJ2O15056 1496 aa15.09■□□□□ 0.01
BRD8-220ENST00000483805 ARAP1Q96P48 1450 aa15.06■□□□□ 0
BRD8-220ENST00000483805 CLASP1Q7Z460 1538 aa15.05■□□□□ -0
BRD8-220ENST00000483805 TOP2BQ02880 1626 aa15.04■□□□□ -0
BRD8-220ENST00000483805 ABCA5Q8WWZ7 1642 aa15.03■□□□□ -0
BRD8-220ENST00000483805 SYNJ1O43426 1573 aa15.02■□□□□ -0
BRD8-220ENST00000483805 BIVM-ERCC5R4GMW8 1640 aa15.02□□□□□ -0.01
BRD8-220ENST00000483805 PBRM1Q86U86 1689 aa15□□□□□ -0.01
BRD8-220ENST00000483805 FHAD1B1AJZ9 1412 aa14.95□□□□□ -0.02
BRD8-220ENST00000483805 GRIN2AQ12879 1464 aa14.95□□□□□ -0.02
BRD8-220ENST00000483805 NUP160Q12769 1436 aa14.92□□□□□ -0.02
BRD8-220ENST00000483805 ERICH3Q5RHP9 1530 aa14.92□□□□□ -0.02
BRD8-220ENST00000483805 TRHP20396 242 aaPredicted RBP14.92□□□□□ -0.02
BRD8-220ENST00000483805 ADAMTS12P58397 1594 aa14.9□□□□□ -0.02
BRD8-220ENST00000483805 CEP170Q5SW79 1584 aa14.86□□□□□ -0.03
BRD8-220ENST00000483805 IGF1RP08069 1367 aa14.85□□□□□ -0.03
BRD8-220ENST00000483805 JPH4Q96JJ6 628 aa14.85□□□□□ -0.03
BRD8-220ENST00000483805 ERCC6L2Q5T890 1561 aa14.83□□□□□ -0.04
BRD8-220ENST00000483805 KIF27Q86VH2 1401 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms