RNA–Protein interactions for RNA: ENST00000511898.1

BRD8-223, Transcript of bromodomain containing 8, humanhuman

TSL 5

Gene BRD8, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD8-223ENST00000511898 NISCHQ9Y2I1 1504 aa18.83■□□□□ 0.6
BRD8-223ENST00000511898 CCDC180Q9P1Z9 1646 aa16.67■□□□□ 0.26
BRD8-223ENST00000511898 ABCC9O60706 1549 aa16.5■□□□□ 0.23
BRD8-223ENST00000511898 DCAF8L2P0C7V8 631 aa15.79■□□□□ 0.12
BRD8-223ENST00000511898 RB1CC1Q8TDY2 1594 aa15.77■□□□□ 0.11
BRD8-223ENST00000511898 NACADO15069 1562 aa15.76■□□□□ 0.11
BRD8-223ENST00000511898 MYO15BQ96JP2 1530 aa15.68■□□□□ 0.1
BRD8-223ENST00000511898 ZCCHC6Q5VYS8 1495 aaKnown RBP15.64■□□□□ 0.09
BRD8-223ENST00000511898 DCAF1Q9Y4B6 1507 aa15.57■□□□□ 0.08
BRD8-223ENST00000511898 CHIC1Q5VXU3 224 aa15.47■□□□□ 0.07
BRD8-223ENST00000511898 PABPN1Q86U42 306 aaKnown RBP eCLIP15.47■□□□□ 0.07
BRD8-223ENST00000511898 DNAJC5BQ9UF47 199 aa15.38■□□□□ 0.05
BRD8-223ENST00000511898 BICRAQ9NZM4 1560 aa15.37■□□□□ 0.05
BRD8-223ENST00000511898 UNC13AQ9UPW8 1703 aa15.37■□□□□ 0.05
BRD8-223ENST00000511898 AEBP2Q6ZN18 517 aaPredicted RBP15.31■□□□□ 0.04
BRD8-223ENST00000511898 SCRIBQ14160 1630 aa15.22■□□□□ 0.03
BRD8-223ENST00000511898 SHROOM4Q9ULL8 1493 aa15.14■□□□□ 0.01
BRD8-223ENST00000511898 EIF4G1Q04637 1599 aaKnown RBP14.94□□□□□ -0.02
BRD8-223ENST00000511898 CC2D2AQ9P2K1 1620 aa14.89□□□□□ -0.03
BRD8-223ENST00000511898 CECR2Q9BXF3 1484 aa14.84□□□□□ -0.03
BRD8-223ENST00000511898 NCAPD3P42695 1498 aa14.62□□□□□ -0.07
BRD8-223ENST00000511898 ATAD2BQ9ULI0 1458 aa14.59□□□□□ -0.07
BRD8-223ENST00000511898 SMARCA4P51532 1647 aa14.57□□□□□ -0.08
BRD8-223ENST00000511898 BAZ1AQ9NRL2 1556 aaPredicted RBP14.56□□□□□ -0.08
BRD8-223ENST00000511898 MROH2BQ7Z745 1585 aa14.51□□□□□ -0.09
BRD8-223ENST00000511898 SMARCA2P51531 1590 aa14.5□□□□□ -0.09
BRD8-223ENST00000511898 PEG3Q9GZU2 1588 aa14.47□□□□□ -0.09
BRD8-223ENST00000511898 HMGXB3Q12766 1538 aa14.45□□□□□ -0.1
BRD8-223ENST00000511898 BAZ1BQ9UIG0 1483 aaKnown RBP14.4□□□□□ -0.1
BRD8-223ENST00000511898 RSF1Q96T23 1441 aaPredicted RBP14.35□□□□□ -0.11
BRD8-223ENST00000511898 WIZO95785 1651 aa14.3□□□□□ -0.12
BRD8-223ENST00000511898 NESP48681 1621 aa14.27□□□□□ -0.12
BRD8-223ENST00000511898 CADPSQ9ULU8 1353 aa14.18□□□□□ -0.14
BRD8-223ENST00000511898 ERCC6Q03468 1493 aa14.18□□□□□ -0.14
BRD8-223ENST00000511898 LAMC3Q9Y6N6 1575 aa14.16□□□□□ -0.14
BRD8-223ENST00000511898 TOP2AP11388 1531 aaKnown RBP14.14□□□□□ -0.15
BRD8-223ENST00000511898 PDS5BQ9NTI5 1447 aa14.11□□□□□ -0.15
BRD8-223ENST00000511898 CUX2O14529 1486 aa14.09□□□□□ -0.15
BRD8-223ENST00000511898 CFTRP13569 1480 aa14.06□□□□□ -0.16
BRD8-223ENST00000511898 CCDC88BA6NC98 1476 aa14.04□□□□□ -0.16
BRD8-223ENST00000511898 THOC2Q8NI27 1593 aaKnown RBP14□□□□□ -0.17
BRD8-223ENST00000511898 KIF21AQ7Z4S6 1674 aa13.99□□□□□ -0.17
BRD8-223ENST00000511898 FANCD2Q9BXW9 1451 aa13.98□□□□□ -0.17
BRD8-223ENST00000511898 MRC2Q9UBG0 1479 aa13.94□□□□□ -0.18
BRD8-223ENST00000511898 CEP164Q9UPV0 1460 aa13.93□□□□□ -0.18
BRD8-223ENST00000511898 WDR62O43379 1518 aa13.9□□□□□ -0.18
BRD8-223ENST00000511898 SUPT5HO00267 1087 aaKnown RBP13.9□□□□□ -0.18
BRD8-223ENST00000511898 DNAJC5Q9H3Z4 198 aa13.89□□□□□ -0.19
BRD8-223ENST00000511898 URB2Q14146 1524 aaKnown RBP13.85□□□□□ -0.19
BRD8-223ENST00000511898 PRDM2Q13029 1718 aa13.76□□□□□ -0.21
BRD8-223ENST00000511898 TOPBP1Q92547 1522 aa13.74□□□□□ -0.21
BRD8-223ENST00000511898 ABCC8Q09428 1581 aa13.72□□□□□ -0.21
BRD8-223ENST00000511898 IFT140Q96RY7 1462 aa13.67□□□□□ -0.22
BRD8-223ENST00000511898 DNMBPQ6XZF7 1577 aa13.67□□□□□ -0.22
BRD8-223ENST00000511898 ZNF608Q9ULD9 1512 aaPredicted RBP13.65□□□□□ -0.22
BRD8-223ENST00000511898 POLA1P09884 1462 aaPredicted RBP13.62□□□□□ -0.23
BRD8-223ENST00000511898 CUX1P39880 1505 aa13.6□□□□□ -0.23
BRD8-223ENST00000511898 SOGA1O94964 1423 aa13.59□□□□□ -0.23
BRD8-223ENST00000511898 TARBP1Q13395 1621 aaKnown RBP13.59□□□□□ -0.23
BRD8-223ENST00000511898 RAD54L2Q9Y4B4 1467 aa13.59□□□□□ -0.23
BRD8-223ENST00000511898 AQRO60306 1485 aaKnown RBP eCLIP13.57□□□□□ -0.242e-9■■■□□ 18.9
BRD8-223ENST00000511898 OSCARQ8IYS5 282 aa13.57□□□□□ -0.24
BRD8-223ENST00000511898 PHF23Q9BUL5 403 aaPredicted RBP13.57□□□□□ -0.24
BRD8-223ENST00000511898 FGD5Q6ZNL6 1462 aa13.56□□□□□ -0.24
BRD8-223ENST00000511898 TDRD9Q8NDG6 1382 aaKnown RBP13.55□□□□□ -0.24
BRD8-223ENST00000511898 EIF4G3O43432 1585 aaKnown RBP13.49□□□□□ -0.25
BRD8-223ENST00000511898 WRNQ14191 1432 aaPredicted RBP eCLIP13.48□□□□□ -0.25
BRD8-223ENST00000511898 ABCA10Q8WWZ4 1543 aa13.44□□□□□ -0.26
BRD8-223ENST00000511898 TOP2BQ02880 1626 aa13.42□□□□□ -0.26
BRD8-223ENST00000511898 SYNJ1O43426 1573 aa13.42□□□□□ -0.26
BRD8-223ENST00000511898 WDR97A6NE52 1622 aa13.42□□□□□ -0.26
BRD8-223ENST00000511898 FBLN2P98095 1184 aa13.41□□□□□ -0.26
BRD8-223ENST00000511898 GRIN2BQ13224 1484 aa13.41□□□□□ -0.26
BRD8-223ENST00000511898 BIVM-ERCC5R4GMW8 1640 aa13.4□□□□□ -0.26
BRD8-223ENST00000511898 GAPVD1Q14C86 1478 aa13.4□□□□□ -0.26
BRD8-223ENST00000511898 SNAPC4Q5SXM2 1469 aa13.39□□□□□ -0.27
BRD8-223ENST00000511898 CHMP7Q8WUX9 453 aaPredicted RBP13.37□□□□□ -0.27
BRD8-223ENST00000511898 MAGI1Q96QZ7 1491 aaPredicted RBP13.36□□□□□ -0.27
BRD8-223ENST00000511898 ABCA5Q8WWZ7 1642 aa13.35□□□□□ -0.27
BRD8-223ENST00000511898 SYNJ2O15056 1496 aa13.33□□□□□ -0.28
BRD8-223ENST00000511898 CHD1O14646 1710 aa13.32□□□□□ -0.28
BRD8-223ENST00000511898 TRIM41Q8WV44 630 aa13.31□□□□□ -0.28
BRD8-223ENST00000511898 ARHGEF11O15085 1522 aa13.28□□□□□ -0.28
BRD8-223ENST00000511898 PBRM1Q86U86 1689 aa13.27□□□□□ -0.29
BRD8-223ENST00000511898 RIMBP3CA6NJZ7 1639 aa13.26□□□□□ -0.29
BRD8-223ENST00000511898 RIMBP3BA6NNM3 1639 aa13.26□□□□□ -0.29
BRD8-223ENST00000511898 RIMBP3Q9UFD9 1639 aa13.26□□□□□ -0.29
BRD8-223ENST00000511898 ERICH3Q5RHP9 1530 aa13.25□□□□□ -0.29
BRD8-223ENST00000511898 CLASP1Q7Z460 1538 aa13.25□□□□□ -0.29
BRD8-223ENST00000511898 FHAD1B1AJZ9 1412 aa13.25□□□□□ -0.29
BRD8-223ENST00000511898 IGF1RP08069 1367 aa13.25□□□□□ -0.29
BRD8-223ENST00000511898 GRIN2AQ12879 1464 aa13.23□□□□□ -0.29
BRD8-223ENST00000511898 CYB5RLQ6IPT4 315 aa13.23□□□□□ -0.29
BRD8-223ENST00000511898 ADAMTS12P58397 1594 aa13.21□□□□□ -0.29
BRD8-223ENST00000511898 NUP160Q12769 1436 aa13.21□□□□□ -0.3
BRD8-223ENST00000511898 KIF27Q86VH2 1401 aa13.21□□□□□ -0.3
BRD8-223ENST00000511898 ARAP1Q96P48 1450 aa13.18□□□□□ -0.3
BRD8-223ENST00000511898 CEP170Q5SW79 1584 aa13.15□□□□□ -0.3
BRD8-223ENST00000511898 CARMIL1Q5VZK9 1371 aa13.12□□□□□ -0.31
BRD8-223ENST00000511898 JPH4Q96JJ6 628 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms