Protein–RNA interactions for Protein: Q02260

SMD1, Small nuclear ribonucleoprotein Sm D1, yeastyeast

Predicted RBP Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SMD1Q02260 RPS24AYER074W 408 nt1.55□□□□□ -2.16
SMD1Q02260 CRG1YHR209W 876 nt1.55□□□□□ -2.16
SMD1Q02260 MSS18YPR134W 807 nt1.55□□□□□ -2.16
SMD1Q02260 CRM1YGR218W 3255 nt1.55□□□□□ -2.16
SMD1Q02260 MNE1YOR350C 1992 nt1.55□□□□□ -2.16
SMD1Q02260 SMC6YLR383W 3345 nt1.55□□□□□ -2.16
SMD1Q02260 RUD3YOR216C 1455 nt1.55□□□□□ -2.16
SMD1Q02260 YOR093CYOR093C 4947 nt1.55□□□□□ -2.16
SMD1Q02260 YJL052C-AYJL052C-A 120 nt1.54□□□□□ -2.16
SMD1Q02260 YKR075W-AYKR075W-A 270 nt1.54□□□□□ -2.16
SMD1Q02260 YPR177CYPR177C 372 nt1.54□□□□□ -2.16
SMD1Q02260 MGM1YOR211C 2646 nt1.54□□□□□ -2.16
SMD1Q02260 SGD1YLR336C 2700 nt1.54□□□□□ -2.16
SMD1Q02260 AGC1YPR021C 2709 nt1.54□□□□□ -2.16
SMD1Q02260 BRE1YDL074C 2103 nt1.54□□□□□ -2.16
SMD1Q02260 NUP170YBL079W 4509 nt1.54□□□□□ -2.16
SMD1Q02260 VPS8YAL002W 3825 nt1.53□□□□□ -2.16
SMD1Q02260 ATG9YDL149W 2994 nt1.53□□□□□ -2.16
SMD1Q02260 tC(GCA)BtC(GCA)B 72 nt1.53□□□□□ -2.16
SMD1Q02260 tC(GCA)GtC(GCA)G 72 nt1.53□□□□□ -2.16
SMD1Q02260 tC(GCA)P1tC(GCA)P1 72 nt1.53□□□□□ -2.16
SMD1Q02260 tC(GCA)P2tC(GCA)P2 72 nt1.53□□□□□ -2.16
SMD1Q02260 YGL069CYGL069C 465 nt1.53□□□□□ -2.16
SMD1Q02260 PUT3YKL015W 2940 nt1.53□□□□□ -2.16
SMD1Q02260 CDC24YAL041W 2565 nt1.53□□□□□ -2.16
SMD1Q02260 RIC1YLR039C 3171 nt1.53□□□□□ -2.16
SMD1Q02260 TMA7YLR262C-A 195 nt1.53□□□□□ -2.16
SMD1Q02260 YLR264C-AYLR264C-A 117 nt1.53□□□□□ -2.16
SMD1Q02260 STB4YMR019W 2850 nt1.53□□□□□ -2.16
SMD1Q02260 CDC27YBL084C 2277 nt1.53□□□□□ -2.16
SMD1Q02260 NOT5YPR072W 1683 nt1.53□□□□□ -2.16
SMD1Q02260 YSW1YBR148W 1830 nt1.53□□□□□ -2.16
SMD1Q02260 CDC60YPL160W 3273 nt1.53□□□□□ -2.17
SMD1Q02260 MET18YIL128W 3099 nt1.53□□□□□ -2.17
SMD1Q02260 PDR3YBL005W 2931 nt1.53□□□□□ -2.17
SMD1Q02260 YER121WYER121W 345 nt1.52□□□□□ -2.17
SMD1Q02260 YER135CYER135C 393 nt1.52□□□□□ -2.17
SMD1Q02260 YGR042WYGR042W 816 nt1.52□□□□□ -2.17
SMD1Q02260 HSK3YKL138C-A 210 nt1.52□□□□□ -2.17
SMD1Q02260 YAL059C-AYAL059C-A 423 nt1.52□□□□□ -2.17
SMD1Q02260 YOR192C-CYOR192C-C 237 nt1.52□□□□□ -2.17
SMD1Q02260 YBR121C-AYBR121C-A 159 nt1.52□□□□□ -2.17
SMD1Q02260 YBR224WYBR224W 516 nt1.52□□□□□ -2.17
SMD1Q02260 GPX2YBR244W 489 nt1.52□□□□□ -2.17
SMD1Q02260 PDR8YLR266C 2106 nt1.52□□□□□ -2.17
SMD1Q02260 YDR341CYDR341C 1824 nt1.52□□□□□ -2.17
SMD1Q02260 JIP5YPR169W 1479 nt1.51□□□□□ -2.17
SMD1Q02260 YDL032WYDL032W 312 nt1.51□□□□□ -2.17
SMD1Q02260 YDR286CYDR286C 345 nt1.51□□□□□ -2.17
SMD1Q02260 NFU1YKL040C 771 nt1.51□□□□□ -2.17
SMD1Q02260 YLR053CYLR053C 327 nt1.51□□□□□ -2.17
SMD1Q02260 RPS18BYML026C 441 nt1.51□□□□□ -2.17
SMD1Q02260 YNL324WYNL324W 396 nt1.51□□□□□ -2.17
SMD1Q02260 RTT101YJL047C 2529 nt1.51□□□□□ -2.17
SMD1Q02260 MGA2YIR033W 3342 nt1.51□□□□□ -2.17
SMD1Q02260 YDL062WYDL062W 426 nt1.5□□□□□ -2.17
SMD1Q02260 YGL024WYGL024W 336 nt1.5□□□□□ -2.17
SMD1Q02260 YLR406C-AYLR406C-A 150 nt1.5□□□□□ -2.17
SMD1Q02260 ZEO1YOL109W 342 nt1.5□□□□□ -2.17
SMD1Q02260 UBP2YOR124C 3819 nt1.5□□□□□ -2.17
SMD1Q02260 MNL2YLR057W 2550 nt1.49□□□□□ -2.17
SMD1Q02260 YDR114CYDR114C 303 nt1.49□□□□□ -2.17
SMD1Q02260 RPL37BYDR500C 267 nt1.49□□□□□ -2.17
SMD1Q02260 YER023C-AYER023C-A 213 nt1.49□□□□□ -2.17
SMD1Q02260 FCF2YLR051C 654 nt1.49□□□□□ -2.17
SMD1Q02260 YBL012CYBL012C 402 nt1.49□□□□□ -2.17
SMD1Q02260 RRT1YBL048W 312 nt1.49□□□□□ -2.17
SMD1Q02260 YBL083CYBL083C 426 nt1.49□□□□□ -2.17
SMD1Q02260 PRM3YPL192C 402 nt1.49□□□□□ -2.17
SMD1Q02260 SET2YJL168C 2202 nt1.49□□□□□ -2.17
SMD1Q02260 DFG16YOR030W 1860 nt1.49□□□□□ -2.17
SMD1Q02260 BUD2YKL092C 3315 nt1.49□□□□□ -2.17
SMD1Q02260 YLR149CYLR149C 2193 nt1.48□□□□□ -2.17
SMD1Q02260 HSL1YKL101W 4557 nt1.48□□□□□ -2.17
SMD1Q02260 FKS1YLR342W 5631 nt1.48□□□□□ -2.17
SMD1Q02260 SYH1YPL105C 2550 nt1.48□□□□□ -2.17
SMD1Q02260 RBK1YCR036W 1002 nt1.48□□□□□ -2.17
SMD1Q02260 QCR7YDR529C 384 nt1.48□□□□□ -2.17
SMD1Q02260 IES5YER092W 378 nt1.48□□□□□ -2.17
SMD1Q02260 URM1YIL008W 300 nt1.48□□□□□ -2.17
SMD1Q02260 YKL063CYKL063C 504 nt1.48□□□□□ -2.17
SMD1Q02260 YML084WYML084W 309 nt1.48□□□□□ -2.17
SMD1Q02260 FYV12YOR183W 390 nt1.48□□□□□ -2.17
SMD1Q02260 SNF5YBR289W 2718 nt1.48□□□□□ -2.17
SMD1Q02260 PET309YLR067C 2898 nt1.48□□□□□ -2.17
SMD1Q02260 BUB1YGR188C 3066 nt1.48□□□□□ -2.17
SMD1Q02260 DNA2YHR164C 4569 nt1.47□□□□□ -2.17
SMD1Q02260 DOT6YER088C 2013 nt1.47□□□□□ -2.17
SMD1Q02260 NAM7YMR080C 2916 nt1.47□□□□□ -2.17
SMD1Q02260 LRE1YCL051W 1752 nt1.47□□□□□ -2.17
SMD1Q02260 PEP3YLR148W 2757 nt1.47□□□□□ -2.17
SMD1Q02260 TMA22YJR014W 597 nt1.47□□□□□ -2.17
SMD1Q02260 PSY1YKL076C 384 nt1.47□□□□□ -2.17
SMD1Q02260 MYO4YAL029C 4416 nt1.47□□□□□ -2.17
SMD1Q02260 SKP2YNL311C 2292 nt1.47□□□□□ -2.17
SMD1Q02260 SCH9YHR205W 2475 nt1.47□□□□□ -2.17
SMD1Q02260 INO80YGL150C 4470 nt1.47□□□□□ -2.17
SMD1Q02260 VTC3YPL019C 2508 nt1.46□□□□□ -2.18
SMD1Q02260 DIS3YOL021C 3006 nt1.46□□□□□ -2.18
SMD1Q02260 IRC20YLR247C 4671 nt1.46□□□□□ -2.18
Retrieved 100 of 7,029 protein–RNA pairs in 17.3 ms