Protein–RNA interactions for Protein: P53236

RSC1, Chromatin structure-remodeling complex subunit RSC1, yeastyeast

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RSC1P53236 tT(UGU)HtT(UGU)H 72 nt1.97□□□□□ -2.09
RSC1P53236 tT(UGU)Q1tT(UGU)Q1 76 nt1.97□□□□□ -2.09
RSC1P53236 SEN15YMR059W 387 nt1.97□□□□□ -2.09
RSC1P53236 SPR3YGR059W 1539 nt1.96□□□□□ -2.09
RSC1P53236 DAS1YJL149W 1992 nt1.96□□□□□ -2.1
RSC1P53236 TFC8YPL007C 1767 nt1.96□□□□□ -2.1
RSC1P53236 YDR220CYDR220C 294 nt1.96□□□□□ -2.1
RSC1P53236 PKR1YMR123W 369 nt1.96□□□□□ -2.1
RSC1P53236 SWS2YNL081C 432 nt1.96□□□□□ -2.1
RSC1P53236 NOP53YPL146C 1368 nt1.96□□□□□ -2.1
RSC1P53236 UBR2YLR024C 5619 nt1.96□□□□□ -2.1
RSC1P53236 SNF5YBR289W 2718 nt1.95□□□□□ -2.1
RSC1P53236 PRE4YFR050C 801 nt1.95□□□□□ -2.1
RSC1P53236 MRPL44YMR225C 297 nt1.95□□□□□ -2.1
RSC1P53236 RNH70YGR276C 1662 nt1.95□□□□□ -2.1
RSC1P53236 NOT5YPR072W 1683 nt1.95□□□□□ -2.1
RSC1P53236 YNL144CYNL144C 2223 nt1.95□□□□□ -2.1
RSC1P53236 UTP21YLR409C 2820 nt1.95□□□□□ -2.1
RSC1P53236 YMR045CYMR045C 5268 nt1.94□□□□□ -2.1
RSC1P53236 KAR3YPR141C 2190 nt1.94□□□□□ -2.1
RSC1P53236 YHR210CYHR210C 1026 nt1.94□□□□□ -2.1
RSC1P53236 BER1YLR412W 825 nt1.94□□□□□ -2.1
RSC1P53236 YOR394C-AYOR394C-A 168 nt1.94□□□□□ -2.1
RSC1P53236 VMR1YHL035C 4779 nt1.94□□□□□ -2.1
RSC1P53236 YMR324CYMR324C 243 nt1.93□□□□□ -2.1
RSC1P53236 YBR012W-AYBR012W-A 1323 nt1.92□□□□□ -2.1
RSC1P53236 YOR142W-AYOR142W-A 1323 nt1.92□□□□□ -2.1
RSC1P53236 YPR158W-AYPR158W-A 1323 nt1.92□□□□□ -2.1
RSC1P53236 IRE1YHR079C 3348 nt1.92□□□□□ -2.1
RSC1P53236 YCR043CYCR043C 384 nt1.92□□□□□ -2.1
RSC1P53236 MET32YDR253C 576 nt1.92□□□□□ -2.1
RSC1P53236 YOL159C-AYOL159C-A 273 nt1.92□□□□□ -2.1
RSC1P53236 SAR1YPL218W 573 nt1.92□□□□□ -2.1
RSC1P53236 SLM6YBR266C 453 nt1.92□□□□□ -2.1
RSC1P53236 MYO2YOR326W 4725 nt1.91□□□□□ -2.1
RSC1P53236 YDL041WYDL041W 354 nt1.91□□□□□ -2.1
RSC1P53236 YEL050W-AYEL050W-A 192 nt1.91□□□□□ -2.1
RSC1P53236 VPS52YDR484W 1926 nt1.91□□□□□ -2.1
RSC1P53236 PEP3YLR148W 2757 nt1.91□□□□□ -2.1
RSC1P53236 CTR9YOL145C 3234 nt1.91□□□□□ -2.1
RSC1P53236 YHR214C-BYHR214C-B 5382 nt1.9□□□□□ -2.11
RSC1P53236 YER088C-AYER088C-A 324 nt1.9□□□□□ -2.11
RSC1P53236 LSO2YGR169C-A 279 nt1.9□□□□□ -2.11
RSC1P53236 IRC19YLL033W 693 nt1.9□□□□□ -2.11
RSC1P53236 YBL083CYBL083C 426 nt1.9□□□□□ -2.11
RSC1P53236 YJR098CYJR098C 1971 nt1.9□□□□□ -2.11
RSC1P53236 CHC1YGL206C 4962 nt1.9□□□□□ -2.11
RSC1P53236 YLR035C-AYLR035C-A 3468 nt1.89□□□□□ -2.11
RSC1P53236 YGR250CYGR250C 2346 nt1.89□□□□□ -2.11
RSC1P53236 TIF11YMR260C 462 nt1.89□□□□□ -2.11
RSC1P53236 YBR224WYBR224W 516 nt1.89□□□□□ -2.11
RSC1P53236 TBS1YBR150C 3285 nt1.89□□□□□ -2.11
RSC1P53236 RBK1YCR036W 1002 nt1.88□□□□□ -2.11
RSC1P53236 SMB1YER029C 591 nt1.88□□□□□ -2.11
RSC1P53236 YKL183C-AYKL183C-A 213 nt1.88□□□□□ -2.11
RSC1P53236 SVS1YPL163C 783 nt1.88□□□□□ -2.11
RSC1P53236 YHR214C-CYHR214C-C 1437 nt1.88□□□□□ -2.11
RSC1P53236 COX1Q0045 1605 nt1.88□□□□□ -2.11
RSC1P53236 RPC10YHR143W-A 213 nt1.87□□□□□ -2.11
RSC1P53236 YKL044WYKL044W 321 nt1.87□□□□□ -2.11
RSC1P53236 YOR248WYOR248W 303 nt1.87□□□□□ -2.11
RSC1P53236 YSW1YBR148W 1830 nt1.87□□□□□ -2.11
RSC1P53236 SWT1YOR166C 1377 nt1.86□□□□□ -2.11
RSC1P53236 YBR184WYBR184W 1572 nt1.86□□□□□ -2.11
RSC1P53236 CFT1YDR301W 4074 nt1.86□□□□□ -2.11
RSC1P53236 MSS11YMR164C 2277 nt1.86□□□□□ -2.11
RSC1P53236 YER188C-AYER188C-A 300 nt1.86□□□□□ -2.11
RSC1P53236 YGL024WYGL024W 336 nt1.86□□□□□ -2.11
RSC1P53236 YOR019WYOR019W 2193 nt1.86□□□□□ -2.11
RSC1P53236 snR79snR79 84 nt1.85□□□□□ -2.11
RSC1P53236 IRR1YIL026C 3453 nt1.84□□□□□ -2.11
RSC1P53236 YDL158CYDL158C 309 nt1.84□□□□□ -2.11
RSC1P53236 snR84snR84 550 nt1.84□□□□□ -2.11
RSC1P53236 YER121WYER121W 345 nt1.84□□□□□ -2.11
RSC1P53236 YJR141WYJR141W 1044 nt1.84□□□□□ -2.11
RSC1P53236 CGI121YML036W 546 nt1.84□□□□□ -2.11
RSC1P53236 YBL073WYBL073W 312 nt1.84□□□□□ -2.11
RSC1P53236 FYV12YOR183W 390 nt1.84□□□□□ -2.11
RSC1P53236 FMP23YBR047W 528 nt1.84□□□□□ -2.11
RSC1P53236 LYS9YNR050C 1341 nt1.84□□□□□ -2.12
RSC1P53236 MDM20YOL076W 2391 nt1.84□□□□□ -2.12
RSC1P53236 IRC20YLR247C 4671 nt1.84□□□□□ -2.12
RSC1P53236 CTF4YPR135W 2784 nt1.83□□□□□ -2.12
RSC1P53236 FRK1YPL141C 2598 nt1.83□□□□□ -2.12
RSC1P53236 SFB2YNL049C 2631 nt1.83□□□□□ -2.12
RSC1P53236 ILM1YJR118C 612 nt1.83□□□□□ -2.12
RSC1P53236 YMR230W-AYMR230W-A 189 nt1.83□□□□□ -2.12
RSC1P53236 SPO24YPR036W-A 204 nt1.83□□□□□ -2.12
RSC1P53236 MEC1YBR136W 7107 nt1.83□□□□□ -2.12
RSC1P53236 SKI3YPR189W 4299 nt1.83□□□□□ -2.12
RSC1P53236 RKM1YPL208W 1752 nt1.82□□□□□ -2.12
RSC1P53236 PRM8YGL053W 714 nt1.82□□□□□ -2.12
RSC1P53236 YJR079WYJR079W 330 nt1.82□□□□□ -2.12
RSC1P53236 TRX1YLR043C 312 nt1.82□□□□□ -2.12
RSC1P53236 RPS18BYML026C 441 nt1.82□□□□□ -2.12
RSC1P53236 COX7YMR256C 183 nt1.82□□□□□ -2.12
RSC1P53236 YNR025CYNR025C 360 nt1.82□□□□□ -2.12
RSC1P53236 TRM3YDL112W 4311 nt1.82□□□□□ -2.12
RSC1P53236 YBP1YBR216C 2025 nt1.81□□□□□ -2.12
RSC1P53236 YDL016CYDL016C 303 nt1.81□□□□□ -2.12
Retrieved 100 of 7,029 protein–RNA pairs in 68.9 ms