Protein–RNA interactions for Protein: P34223

SHP1, UBX domain-containing protein 1, yeastyeast

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SHP1P34223 YPR170W-AYPR170W-A 186 nt2.23□□□□□ -2.05
SHP1P34223 KAP123YER110C 3342 nt2.23□□□□□ -2.05
SHP1P34223 SPC72YAL047C 1869 nt2.22□□□□□ -2.05
SHP1P34223 YSW1YBR148W 1830 nt2.22□□□□□ -2.05
SHP1P34223 COX1Q0045 1605 nt2.22□□□□□ -2.05
SHP1P34223 NFU1YKL040C 771 nt2.22□□□□□ -2.05
SHP1P34223 GRX8YLR364W 330 nt2.22□□□□□ -2.05
SHP1P34223 ERP4YOR016C 624 nt2.22□□□□□ -2.05
SHP1P34223 FAR11YNL127W 2862 nt2.22□□□□□ -2.05
SHP1P34223 SWA2YDR320C 2007 nt2.22□□□□□ -2.05
SHP1P34223 SWT1YOR166C 1377 nt2.22□□□□□ -2.05
SHP1P34223 snR79snR79 84 nt2.21□□□□□ -2.06
SHP1P34223 SWF1YDR126W 1011 nt2.21□□□□□ -2.06
SHP1P34223 TWF1YGR080W 999 nt2.21□□□□□ -2.06
SHP1P34223 LSO2YGR169C-A 279 nt2.21□□□□□ -2.06
SHP1P34223 YLR334CYLR334C 381 nt2.21□□□□□ -2.06
SHP1P34223 RPS29AYLR388W 171 nt2.21□□□□□ -2.06
SHP1P34223 SEC16YPL085W 6588 nt2.21□□□□□ -2.06
SHP1P34223 MGM1YOR211C 2646 nt2.21□□□□□ -2.06
SHP1P34223 BFA1YJR053W 1725 nt2.2□□□□□ -2.06
SHP1P34223 UFD4YKL010C 4452 nt2.2□□□□□ -2.06
SHP1P34223 MSL5YLR116W 1431 nt2.2□□□□□ -2.06
SHP1P34223 YOR293C-AYOR293C-A 150 nt2.2□□□□□ -2.06
SHP1P34223 YEL043WYEL043W 2871 nt2.2□□□□□ -2.06
SHP1P34223 BRE1YDL074C 2103 nt2.2□□□□□ -2.06
SHP1P34223 KOG1YHR186C 4674 nt2.2□□□□□ -2.06
SHP1P34223 CDC24YAL041W 2565 nt2.19□□□□□ -2.06
SHP1P34223 SDH7YDR511W 402 nt2.19□□□□□ -2.06
SHP1P34223 SMD1YGR074W 441 nt2.19□□□□□ -2.06
SHP1P34223 NOP10YHR072W-A 177 nt2.19□□□□□ -2.06
SHP1P34223 UBC7YMR022W 498 nt2.19□□□□□ -2.06
SHP1P34223 DGR1YNL130C-A 147 nt2.19□□□□□ -2.06
SHP1P34223 YOR392WYOR392W 444 nt2.19□□□□□ -2.06
SHP1P34223 RTC6YPL183W-A 282 nt2.19□□□□□ -2.06
SHP1P34223 YBR285WYBR285W 435 nt2.19□□□□□ -2.06
SHP1P34223 MKT1YNL085W 2493 nt2.19□□□□□ -2.06
SHP1P34223 GIS1YDR096W 2685 nt2.19□□□□□ -2.06
SHP1P34223 YOL098CYOL098C 3114 nt2.19□□□□□ -2.06
SHP1P34223 TAE2YPL009C 3117 nt2.19□□□□□ -2.06
SHP1P34223 PSD2YGR170W 3417 nt2.19□□□□□ -2.06
SHP1P34223 YHL009W-AYHL009W-A 1242 nt2.18□□□□□ -2.06
SHP1P34223 YOR053WYOR053W 342 nt2.18□□□□□ -2.06
SHP1P34223 KRE33YNL132W 3171 nt2.18□□□□□ -2.06
SHP1P34223 KIP1YBL063W 3336 nt2.17□□□□□ -2.06
SHP1P34223 CBS1YDL069C 690 nt2.17□□□□□ -2.06
SHP1P34223 URM1YIL008W 300 nt2.17□□□□□ -2.06
SHP1P34223 SEC22YLR268W 645 nt2.17□□□□□ -2.06
SHP1P34223 YLR287CYLR287C 1068 nt2.17□□□□□ -2.06
SHP1P34223 DAD3YBR233W-A 285 nt2.17□□□□□ -2.06
SHP1P34223 SSD1YDR293C 3753 nt2.17□□□□□ -2.06
SHP1P34223 UBR1YGR184C 5853 nt2.17□□□□□ -2.06
SHP1P34223 IRA2YOL081W 9240 nt2.17□□□□□ -2.06
SHP1P34223 TOF1YNL273W 3717 nt2.16□□□□□ -2.06
SHP1P34223 DIE2YGR227W 1578 nt2.16□□□□□ -2.06
SHP1P34223 RRP6YOR001W 2202 nt2.16□□□□□ -2.06
SHP1P34223 YER121WYER121W 345 nt2.16□□□□□ -2.06
SHP1P34223 YER172C-AYER172C-A 381 nt2.16□□□□□ -2.06
SHP1P34223 RPS24BYIL069C 408 nt2.16□□□□□ -2.06
SHP1P34223 RPS18BYML026C 441 nt2.16□□□□□ -2.06
SHP1P34223 NUP120YKL057C 3114 nt2.16□□□□□ -2.06
SHP1P34223 MSS11YMR164C 2277 nt2.16□□□□□ -2.06
SHP1P34223 KAR3YPR141C 2190 nt2.15□□□□□ -2.07
SHP1P34223 YER076W-AYER076W-A 348 nt2.15□□□□□ -2.07
SHP1P34223 YHR175W-AYHR175W-A 150 nt2.15□□□□□ -2.07
SHP1P34223 TMA22YJR014W 597 nt2.15□□□□□ -2.07
SHP1P34223 PAU8YAL068C 363 nt2.15□□□□□ -2.07
SHP1P34223 YAL068W-AYAL068W-A 255 nt2.15□□□□□ -2.07
SHP1P34223 PAU20YOL161C 363 nt2.15□□□□□ -2.07
SHP1P34223 YPL261CYPL261C 309 nt2.15□□□□□ -2.07
SHP1P34223 REV3YPL167C 4515 nt2.15□□□□□ -2.07
SHP1P34223 YFR016CYFR016C 3702 nt2.15□□□□□ -2.07
SHP1P34223 VPS35YJL154C 2835 nt2.15□□□□□ -2.07
SHP1P34223 SPP41YDR464W 4308 nt2.14□□□□□ -2.07
SHP1P34223 CDC50YCR094W 1176 nt2.14□□□□□ -2.07
SHP1P34223 MRP10YDL045W-A 288 nt2.14□□□□□ -2.07
SHP1P34223 YER023C-AYER023C-A 213 nt2.14□□□□□ -2.07
SHP1P34223 SNC1YAL030W 354 nt2.14□□□□□ -2.07
SHP1P34223 YKL165C-AYKL165C-A 234 nt2.14□□□□□ -2.07
SHP1P34223 YLR434CYLR434C 384 nt2.14□□□□□ -2.07
SHP1P34223 MRPL50YNR022C 420 nt2.14□□□□□ -2.07
SHP1P34223 YPR146CYPR146C 330 nt2.14□□□□□ -2.07
SHP1P34223 ARP7YPR034W 1434 nt2.14□□□□□ -2.07
SHP1P34223 IRC8YJL051W 2469 nt2.13□□□□□ -2.07
SHP1P34223 RPL27BYDR471W 411 nt2.13□□□□□ -2.07
SHP1P34223 GIM4YEL003W 336 nt2.13□□□□□ -2.07
SHP1P34223 tR(ACG)Q2tR(ACG)Q2 74 nt2.13□□□□□ -2.07
SHP1P34223 MSL1YIR009W 336 nt2.13□□□□□ -2.07
SHP1P34223 FCF2YLR051C 654 nt2.13□□□□□ -2.07
SHP1P34223 SNC2YOR327C 348 nt2.13□□□□□ -2.07
SHP1P34223 YPL185WYPL185W 396 nt2.13□□□□□ -2.07
SHP1P34223 NUP100YKL068W 2880 nt2.13□□□□□ -2.07
SHP1P34223 SPO22YIL073C 2928 nt2.12□□□□□ -2.07
SHP1P34223 RAV1YJR033C 4074 nt2.12□□□□□ -2.07
SHP1P34223 BSC3YLR465C 309 nt2.12□□□□□ -2.07
SHP1P34223 AFI1YOR129C 2682 nt2.12□□□□□ -2.07
SHP1P34223 YLR154W-AYLR154W-A 186 nt2.11□□□□□ -2.07
SHP1P34223 VTI1YMR197C 654 nt2.11□□□□□ -2.07
SHP1P34223 EDS1YBR033W 2760 nt2.11□□□□□ -2.07
SHP1P34223 HSH155YMR288W 2916 nt2.11□□□□□ -2.07
SHP1P34223 SGD1YLR336C 2700 nt2.1□□□□□ -2.07
Retrieved 100 of 7,029 protein–RNA pairs in 78.8 ms