Protein–RNA interactions for Protein: Q9UPW0

FOXJ3, Forkhead box protein J3, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXJ3Q9UPW0 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
FOXJ3Q9UPW0 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
FOXJ3Q9UPW0 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
FOXJ3Q9UPW0 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
FOXJ3Q9UPW0 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC17.74■□□□□ 0.43
FOXJ3Q9UPW0 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
FOXJ3Q9UPW0 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
FOXJ3Q9UPW0 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
FOXJ3Q9UPW0 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
FOXJ3Q9UPW0 AC116562.4-201ENST00000641316 2276 ntBASIC17.74■□□□□ 0.43
FOXJ3Q9UPW0 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
FOXJ3Q9UPW0 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC17.73■□□□□ 0.43
FOXJ3Q9UPW0 MPST-204ENST00000404393 1329 ntTSL 5 BASIC17.73■□□□□ 0.43
FOXJ3Q9UPW0 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC17.73■□□□□ 0.43
FOXJ3Q9UPW0 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC17.73■□□□□ 0.43
FOXJ3Q9UPW0 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC17.73■□□□□ 0.43
FOXJ3Q9UPW0 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
FOXJ3Q9UPW0 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC17.73■□□□□ 0.43
FOXJ3Q9UPW0 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
FOXJ3Q9UPW0 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC17.73■□□□□ 0.43
FOXJ3Q9UPW0 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
FOXJ3Q9UPW0 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
FOXJ3Q9UPW0 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
FOXJ3Q9UPW0 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC17.73■□□□□ 0.43
FOXJ3Q9UPW0 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC17.73■□□□□ 0.43
FOXJ3Q9UPW0 MIR5787-201ENST00000611784 55 ntBASIC17.73■□□□□ 0.43
FOXJ3Q9UPW0 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
FOXJ3Q9UPW0 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC17.73■□□□□ 0.43
FOXJ3Q9UPW0 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC17.73■□□□□ 0.43
FOXJ3Q9UPW0 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
FOXJ3Q9UPW0 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
FOXJ3Q9UPW0 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
FOXJ3Q9UPW0 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
FOXJ3Q9UPW0 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
FOXJ3Q9UPW0 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
FOXJ3Q9UPW0 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
FOXJ3Q9UPW0 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
FOXJ3Q9UPW0 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
FOXJ3Q9UPW0 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC17.72■□□□□ 0.43
FOXJ3Q9UPW0 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
FOXJ3Q9UPW0 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
FOXJ3Q9UPW0 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
FOXJ3Q9UPW0 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC17.72■□□□□ 0.43
FOXJ3Q9UPW0 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
FOXJ3Q9UPW0 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
FOXJ3Q9UPW0 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
FOXJ3Q9UPW0 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
FOXJ3Q9UPW0 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
FOXJ3Q9UPW0 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
FOXJ3Q9UPW0 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
FOXJ3Q9UPW0 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC17.72■□□□□ 0.43
FOXJ3Q9UPW0 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
FOXJ3Q9UPW0 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
FOXJ3Q9UPW0 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
FOXJ3Q9UPW0 RARRES2P11-201ENST00000635158 484 ntBASIC17.72■□□□□ 0.43
FOXJ3Q9UPW0 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC17.72■□□□□ 0.43
FOXJ3Q9UPW0 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
FOXJ3Q9UPW0 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC17.72■□□□□ 0.43
FOXJ3Q9UPW0 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
FOXJ3Q9UPW0 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
FOXJ3Q9UPW0 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
FOXJ3Q9UPW0 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
FOXJ3Q9UPW0 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
FOXJ3Q9UPW0 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC17.71■□□□□ 0.43
FOXJ3Q9UPW0 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
FOXJ3Q9UPW0 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
FOXJ3Q9UPW0 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
FOXJ3Q9UPW0 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC17.71■□□□□ 0.43
FOXJ3Q9UPW0 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
FOXJ3Q9UPW0 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC17.71■□□□□ 0.43
FOXJ3Q9UPW0 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC17.71■□□□□ 0.43
FOXJ3Q9UPW0 AC012414.1-201ENST00000556676 535 ntBASIC17.71■□□□□ 0.43
FOXJ3Q9UPW0 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC17.71■□□□□ 0.43
FOXJ3Q9UPW0 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
FOXJ3Q9UPW0 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
FOXJ3Q9UPW0 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
FOXJ3Q9UPW0 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
FOXJ3Q9UPW0 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC17.71■□□□□ 0.43
FOXJ3Q9UPW0 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
FOXJ3Q9UPW0 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC17.71■□□□□ 0.42
FOXJ3Q9UPW0 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
FOXJ3Q9UPW0 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC17.7■□□□□ 0.42
FOXJ3Q9UPW0 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
FOXJ3Q9UPW0 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC17.7■□□□□ 0.42
FOXJ3Q9UPW0 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
FOXJ3Q9UPW0 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
FOXJ3Q9UPW0 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC17.7■□□□□ 0.42
FOXJ3Q9UPW0 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC17.7■□□□□ 0.42
FOXJ3Q9UPW0 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
FOXJ3Q9UPW0 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
FOXJ3Q9UPW0 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
FOXJ3Q9UPW0 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
FOXJ3Q9UPW0 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
FOXJ3Q9UPW0 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
FOXJ3Q9UPW0 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
FOXJ3Q9UPW0 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
FOXJ3Q9UPW0 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
FOXJ3Q9UPW0 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
FOXJ3Q9UPW0 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC17.7■□□□□ 0.42
FOXJ3Q9UPW0 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 68.7 ms