Protein–RNA interactions for Protein: Q3ZAQ7

VMA21, Vacuolar ATPase assembly integral membrane protein VMA21, humanhuman

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21Q3ZAQ7 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
VMA21Q3ZAQ7 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
VMA21Q3ZAQ7 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
VMA21Q3ZAQ7 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
VMA21Q3ZAQ7 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
VMA21Q3ZAQ7 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC16.43■□□□□ 0.22
VMA21Q3ZAQ7 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
VMA21Q3ZAQ7 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
VMA21Q3ZAQ7 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC16.42■□□□□ 0.22
VMA21Q3ZAQ7 AC092667.1-201ENST00000434301 2586 ntBASIC16.42■□□□□ 0.22
VMA21Q3ZAQ7 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
VMA21Q3ZAQ7 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
VMA21Q3ZAQ7 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
VMA21Q3ZAQ7 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
VMA21Q3ZAQ7 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
VMA21Q3ZAQ7 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
VMA21Q3ZAQ7 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
VMA21Q3ZAQ7 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC16.42■□□□□ 0.22
VMA21Q3ZAQ7 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC16.42■□□□□ 0.22
VMA21Q3ZAQ7 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC16.42■□□□□ 0.22
VMA21Q3ZAQ7 FAM21FP-204ENST00000608637 956 ntBASIC16.42■□□□□ 0.22
VMA21Q3ZAQ7 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
VMA21Q3ZAQ7 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC16.42■□□□□ 0.22
VMA21Q3ZAQ7 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
VMA21Q3ZAQ7 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC16.42■□□□□ 0.22
VMA21Q3ZAQ7 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
VMA21Q3ZAQ7 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
VMA21Q3ZAQ7 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
VMA21Q3ZAQ7 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
VMA21Q3ZAQ7 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
VMA21Q3ZAQ7 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
VMA21Q3ZAQ7 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
VMA21Q3ZAQ7 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
VMA21Q3ZAQ7 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
VMA21Q3ZAQ7 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
VMA21Q3ZAQ7 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
VMA21Q3ZAQ7 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
VMA21Q3ZAQ7 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
VMA21Q3ZAQ7 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
VMA21Q3ZAQ7 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC16.41■□□□□ 0.22
VMA21Q3ZAQ7 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
VMA21Q3ZAQ7 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
VMA21Q3ZAQ7 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
VMA21Q3ZAQ7 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
VMA21Q3ZAQ7 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
VMA21Q3ZAQ7 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
VMA21Q3ZAQ7 KRT18P11-201ENST00000435214 1283 ntBASIC16.41■□□□□ 0.22
VMA21Q3ZAQ7 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
VMA21Q3ZAQ7 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC16.41■□□□□ 0.22
VMA21Q3ZAQ7 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
VMA21Q3ZAQ7 PLD4-205ENST00000553861 667 ntTSL 2 BASIC16.41■□□□□ 0.22
VMA21Q3ZAQ7 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC16.41■□□□□ 0.22
VMA21Q3ZAQ7 MIR6821-201ENST00000617625 74 ntBASIC16.41■□□□□ 0.22
VMA21Q3ZAQ7 MIR2861-201ENST00000636310 90 ntBASIC16.41■□□□□ 0.22
VMA21Q3ZAQ7 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
VMA21Q3ZAQ7 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
VMA21Q3ZAQ7 MED17-221ENST00000639724 2317 ntTSL 5 BASIC16.41■□□□□ 0.22
VMA21Q3ZAQ7 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC16.41■□□□□ 0.22
VMA21Q3ZAQ7 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
VMA21Q3ZAQ7 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
VMA21Q3ZAQ7 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
VMA21Q3ZAQ7 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
VMA21Q3ZAQ7 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC16.4■□□□□ 0.22
VMA21Q3ZAQ7 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
VMA21Q3ZAQ7 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC16.4■□□□□ 0.22
VMA21Q3ZAQ7 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
VMA21Q3ZAQ7 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
VMA21Q3ZAQ7 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
VMA21Q3ZAQ7 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
VMA21Q3ZAQ7 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
VMA21Q3ZAQ7 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
VMA21Q3ZAQ7 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
VMA21Q3ZAQ7 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
VMA21Q3ZAQ7 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC16.4■□□□□ 0.22
VMA21Q3ZAQ7 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC16.4■□□□□ 0.22
VMA21Q3ZAQ7 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
VMA21Q3ZAQ7 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
VMA21Q3ZAQ7 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC16.4■□□□□ 0.22
VMA21Q3ZAQ7 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC16.4■□□□□ 0.22
VMA21Q3ZAQ7 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
VMA21Q3ZAQ7 TFG-210ENST00000620299 1289 ntTSL 5 BASIC16.4■□□□□ 0.22
VMA21Q3ZAQ7 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC16.4■□□□□ 0.22
VMA21Q3ZAQ7 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
VMA21Q3ZAQ7 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
VMA21Q3ZAQ7 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
VMA21Q3ZAQ7 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
VMA21Q3ZAQ7 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
VMA21Q3ZAQ7 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
VMA21Q3ZAQ7 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
VMA21Q3ZAQ7 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC16.4■□□□□ 0.22
VMA21Q3ZAQ7 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.22
VMA21Q3ZAQ7 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC16.39■□□□□ 0.22
VMA21Q3ZAQ7 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.22
VMA21Q3ZAQ7 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
VMA21Q3ZAQ7 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC16.39■□□□□ 0.21
VMA21Q3ZAQ7 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
VMA21Q3ZAQ7 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
VMA21Q3ZAQ7 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
VMA21Q3ZAQ7 AC073130.3-201ENST00000624389 2278 ntBASIC16.39■□□□□ 0.21
VMA21Q3ZAQ7 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 194.1 ms