Protein–RNA interactions for Protein: P50875

SPT20, Transcription factor SPT20, yeastyeast

Predictions only

Length 604 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SPT20P50875 YER189WYER189W 369 nt3.1□□□□□ -1.91
SPT20P50875 tK(UUU)KtK(UUU)K 73 nt3.1□□□□□ -1.91
SPT20P50875 tK(UUU)LtK(UUU)L 73 nt3.1□□□□□ -1.91
SPT20P50875 tK(UUU)OtK(UUU)O 73 nt3.1□□□□□ -1.91
SPT20P50875 tK(UUU)PtK(UUU)P 73 nt3.1□□□□□ -1.91
SPT20P50875 PAU11YGL261C 363 nt3.1□□□□□ -1.91
SPT20P50875 PAU4YLR461W 363 nt3.1□□□□□ -1.91
SPT20P50875 SAR1YPL218W 573 nt3.1□□□□□ -1.91
SPT20P50875 TRM7YBR061C 933 nt3.1□□□□□ -1.91
SPT20P50875 YPR146CYPR146C 330 nt3.1□□□□□ -1.91
SPT20P50875 YIL166CYIL166C 1629 nt3.1□□□□□ -1.91
SPT20P50875 TCP1YDR212W 1680 nt3.1□□□□□ -1.91
SPT20P50875 MDM20YOL076W 2391 nt3.1□□□□□ -1.91
SPT20P50875 ATP25YMR098C 1839 nt3.09□□□□□ -1.91
SPT20P50875 SNT1YCR033W 3681 nt3.09□□□□□ -1.91
SPT20P50875 RPN1YHR027C 2982 nt3.09□□□□□ -1.91
SPT20P50875 UBP5YER144C 2418 nt3.09□□□□□ -1.91
SPT20P50875 PFK26YIL107C 2484 nt3.09□□□□□ -1.91
SPT20P50875 POL2YNL262W 6669 nt3.09□□□□□ -1.91
SPT20P50875 BRO1YPL084W 2535 nt3.09□□□□□ -1.91
SPT20P50875 YJL222W-BYJL222W-B 138 nt3.09□□□□□ -1.91
SPT20P50875 NMA111YNL123W 2994 nt3.09□□□□□ -1.91
SPT20P50875 RPS23BYPR132W 438 nt3.09□□□□□ -1.91
SPT20P50875 snR191snR191 274 nt3.09□□□□□ -1.91
SPT20P50875 PHO81YGR233C 3537 nt3.09□□□□□ -1.92
SPT20P50875 DOA4YDR069C 2781 nt3.08□□□□□ -1.92
SPT20P50875 CSR2YPR030W 3366 nt3.08□□□□□ -1.92
SPT20P50875 YMR317WYMR317W 3423 nt3.08□□□□□ -1.92
SPT20P50875 SQS1YNL224C 2304 nt3.08□□□□□ -1.92
SPT20P50875 MSR1YHR091C 1932 nt3.08□□□□□ -1.92
SPT20P50875 DIS3YOL021C 3006 nt3.08□□□□□ -1.92
SPT20P50875 ECM5YMR176W 4236 nt3.08□□□□□ -1.92
SPT20P50875 HFM1YGL251C 3564 nt3.07□□□□□ -1.92
SPT20P50875 YSP2YDR326C 4317 nt3.07□□□□□ -1.92
SPT20P50875 tC(GCA)BtC(GCA)B 72 nt3.07□□□□□ -1.92
SPT20P50875 tC(GCA)GtC(GCA)G 72 nt3.07□□□□□ -1.92
SPT20P50875 tC(GCA)P1tC(GCA)P1 72 nt3.07□□□□□ -1.92
SPT20P50875 tC(GCA)P2tC(GCA)P2 72 nt3.07□□□□□ -1.92
SPT20P50875 YMR321CYMR321C 318 nt3.07□□□□□ -1.92
SPT20P50875 SIZ1YDR409W 2715 nt3.07□□□□□ -1.92
SPT20P50875 AI5_ALPHAQ0070 1893 nt3.07□□□□□ -1.92
SPT20P50875 NUP120YKL057C 3114 nt3.06□□□□□ -1.92
SPT20P50875 NPC2YDL046W 522 nt3.06□□□□□ -1.92
SPT20P50875 PHO2YDL106C 1680 nt3.06□□□□□ -1.92
SPT20P50875 YLR120W-AYLR120W-A 102 nt3.06□□□□□ -1.92
SPT20P50875 APC2YLR127C 2562 nt3.06□□□□□ -1.92
SPT20P50875 YOR015WYOR015W 360 nt3.06□□□□□ -1.92
SPT20P50875 GYL1YMR192W 2163 nt3.05□□□□□ -1.92
SPT20P50875 STE6YKL209C 3873 nt3.05□□□□□ -1.92
SPT20P50875 PCC1YKR095W-A 267 nt3.05□□□□□ -1.92
SPT20P50875 YNL028WYNL028W 318 nt3.05□□□□□ -1.92
SPT20P50875 YOR073W-AYOR073W-A 234 nt3.05□□□□□ -1.92
SPT20P50875 FAR1YJL157C 2493 nt3.05□□□□□ -1.92
SPT20P50875 CHS3YBR023C 3498 nt3.05□□□□□ -1.92
SPT20P50875 BIT61YJL058C 1632 nt3.04□□□□□ -1.92
SPT20P50875 YGR250CYGR250C 2346 nt3.04□□□□□ -1.92
SPT20P50875 BNI4YNL233W 2679 nt3.04□□□□□ -1.92
SPT20P50875 PUF6YDR496C 1971 nt3.04□□□□□ -1.92
SPT20P50875 RRT15YLR162W-A 189 nt3.04□□□□□ -1.92
SPT20P50875 YHR080CYHR080C 4038 nt3.04□□□□□ -1.92
SPT20P50875 VTC4YJL012C 2166 nt3.04□□□□□ -1.92
SPT20P50875 RLF2YPR018W 1821 nt3.03□□□□□ -1.92
SPT20P50875 YDL242WYDL242W 354 nt3.03□□□□□ -1.92
SPT20P50875 VTC1YER072W 390 nt3.03□□□□□ -1.92
SPT20P50875 TIM12YBR091C 330 nt3.03□□□□□ -1.92
SPT20P50875 YBR121C-AYBR121C-A 159 nt3.03□□□□□ -1.92
SPT20P50875 SKT5YBL061C 2091 nt3.03□□□□□ -1.92
SPT20P50875 YCG1YDR325W 3108 nt3.02□□□□□ -1.93
SPT20P50875 REC8YPR007C 2043 nt3.02□□□□□ -1.93
SPT20P50875 YLR154W-EYLR154W-E 204 nt3.02□□□□□ -1.93
SPT20P50875 MRPL33YMR286W 261 nt3.02□□□□□ -1.93
SPT20P50875 YMR324CYMR324C 243 nt3.02□□□□□ -1.93
SPT20P50875 CSE2YNR010W 450 nt3.02□□□□□ -1.93
SPT20P50875 XRN1YGL173C 4587 nt3.02□□□□□ -1.93
SPT20P50875 SIP3YNL257C 3690 nt3.01□□□□□ -1.93
SPT20P50875 TFB1YDR311W 1929 nt3.01□□□□□ -1.93
SPT20P50875 LEU3YLR451W 2661 nt3.01□□□□□ -1.93
SPT20P50875 NPR1YNL183C 2373 nt3.01□□□□□ -1.93
SPT20P50875 RPS17BYDR447C 411 nt3.01□□□□□ -1.93
SPT20P50875 RPL38YLR325C 237 nt3.01□□□□□ -1.93
SPT20P50875 YBL065WYBL065W 345 nt3.01□□□□□ -1.93
SPT20P50875 RPL20BYOR312C 519 nt3.01□□□□□ -1.93
SPT20P50875 YBR224WYBR224W 516 nt3.01□□□□□ -1.93
SPT20P50875 GCD6YDR211W 2139 nt3.01□□□□□ -1.93
SPT20P50875 CIN8YEL061C 3003 nt3□□□□□ -1.93
SPT20P50875 QCR7YDR529C 384 nt3□□□□□ -1.93
SPT20P50875 YNL097C-BYNL097C-B 123 nt3□□□□□ -1.93
SPT20P50875 RCY1YJL204C 2523 nt3□□□□□ -1.93
SPT20P50875 NCL1YBL024W 2055 nt3□□□□□ -1.93
SPT20P50875 LRE1YCL051W 1752 nt3□□□□□ -1.93
SPT20P50875 RBK1YCR036W 1002 nt2.99□□□□□ -1.93
SPT20P50875 SMD1YGR074W 441 nt2.99□□□□□ -1.93
SPT20P50875 YIL059CYIL059C 366 nt2.99□□□□□ -1.93
SPT20P50875 UPS1YLR193C 528 nt2.99□□□□□ -1.93
SPT20P50875 GOT1YMR292W 417 nt2.99□□□□□ -1.93
SPT20P50875 snR46snR46 197 nt2.99□□□□□ -1.93
SPT20P50875 HDA3YPR179C 1968 nt2.99□□□□□ -1.93
SPT20P50875 SSE1YPL106C 2082 nt2.99□□□□□ -1.93
SPT20P50875 SPO71YDR104C 3738 nt2.98□□□□□ -1.93
SPT20P50875 COX23YHR116W 456 nt2.98□□□□□ -1.93
Retrieved 100 of 7,029 protein–RNA pairs in 72 ms