Protein–RNA interactions for Protein: P47171

HIR3, Histone transcription regulator 3, yeastyeast

Predictions only

Length 1,648 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
HIR3P47171 LSM7YNL147W 348 nt0.06□□□□□ -2.4
HIR3P47171 YBL100W-BYBL100W-B 5313 nt0.06□□□□□ -2.4
HIR3P47171 MPD1YOR288C 957 nt0.05□□□□□ -2.4
HIR3P47171 NOP53YPL146C 1368 nt0.05□□□□□ -2.4
HIR3P47171 YSW1YBR148W 1830 nt0.05□□□□□ -2.4
HIR3P47171 NUT1YGL151W 3399 nt0.05□□□□□ -2.4
HIR3P47171 ECM12YHR021W-A 456 nt0.05□□□□□ -2.4
HIR3P47171 LOA1YPR139C 903 nt0.04□□□□□ -2.4
HIR3P47171 YBR277CYBR277C 402 nt0.04□□□□□ -2.4
HIR3P47171 PRK1YIL095W 2433 nt0.03□□□□□ -2.4
HIR3P47171 YLR400WYLR400W 474 nt0.03□□□□□ -2.4
HIR3P47171 YMR178WYMR178W 825 nt0.02□□□□□ -2.41
HIR3P47171 YDR261W-AYDR261W-A 1317 nt0.02□□□□□ -2.41
HIR3P47171 APC2YLR127C 2562 nt0.02□□□□□ -2.41
HIR3P47171 YOL150CYOL150C 312 nt0.02□□□□□ -2.41
HIR3P47171 MSS2YDL107W 1056 nt0.01□□□□□ -2.41
HIR3P47171 TFB5YDR079C-A 219 nt0.01□□□□□ -2.41
HIR3P47171 YGR011WYGR011W 327 nt0.01□□□□□ -2.41
HIR3P47171 YGR164WYGR164W 336 nt0.01□□□□□ -2.41
HIR3P47171 GRX7YBR014C 612 nt0.01□□□□□ -2.41
HIR3P47171 SWT1YOR166C 1377 nt0.01□□□□□ -2.41
HIR3P47171 EMC4YGL231C 573 nt0□□□□□ -2.41
HIR3P47171 AFR1YDR085C 1863 nt-0.01□□□□□ -2.41
HIR3P47171 UPS2YLR168C 693 nt-0.01□□□□□ -2.41
HIR3P47171 MEI4YER044C-A 1227 nt-0.02□□□□□ -2.41
HIR3P47171 REX3YLR107W 1215 nt-0.02□□□□□ -2.41
HIR3P47171 YER147C-AYER147C-A 411 nt-0.02□□□□□ -2.41
HIR3P47171 YLR290CYLR290C 834 nt-0.02□□□□□ -2.41
HIR3P47171 IRC23YOR044W 474 nt-0.02□□□□□ -2.41
HIR3P47171 SAG1YJR004C 1953 nt-0.03□□□□□ -2.41
HIR3P47171 SLF1YDR515W 1344 nt-0.03□□□□□ -2.41
HIR3P47171 YPR148CYPR148C 1308 nt-0.03□□□□□ -2.41
HIR3P47171 YIL141WYIL141W 390 nt-0.03□□□□□ -2.41
HIR3P47171 YOR161W-BYOR161W-B 261 nt-0.03□□□□□ -2.41
HIR3P47171 YPL135C-AYPL135C-A 174 nt-0.03□□□□□ -2.41
HIR3P47171 MON1YGL124C 1935 nt-0.04□□□□□ -2.42
HIR3P47171 YHL009W-AYHL009W-A 1242 nt-0.04□□□□□ -2.42
HIR3P47171 SDL1YIL167W 633 nt-0.04□□□□□ -2.42
HIR3P47171 YLR124WYLR124W 345 nt-0.04□□□□□ -2.42
HIR3P47171 NUP188YML103C 4968 nt-0.04□□□□□ -2.42
HIR3P47171 snR11snR11 258 nt-0.05□□□□□ -2.42
HIR3P47171 YEL009C-AYEL009C-A 408 nt-0.05□□□□□ -2.42
HIR3P47171 MKT1YNL085W 2493 nt-0.06□□□□□ -2.42
HIR3P47171 GIM3YNL153C 390 nt-0.06□□□□□ -2.42
HIR3P47171 SLU7YDR088C 1149 nt-0.07□□□□□ -2.42
HIR3P47171 YFR054CYFR054C 579 nt-0.07□□□□□ -2.42
HIR3P47171 KDX1YKL161C 1302 nt-0.08□□□□□ -2.42
HIR3P47171 STB6YKL072W 2301 nt-0.08□□□□□ -2.42
HIR3P47171 YIR017W-AYIR017W-A 600 nt-0.08□□□□□ -2.42
HIR3P47171 SNC1YAL030W 354 nt-0.08□□□□□ -2.42
HIR3P47171 CKA1YIL035C 1119 nt-0.09□□□□□ -2.42
HIR3P47171 RAD34YDR314C 2079 nt-0.09□□□□□ -2.42
HIR3P47171 YDR355CYDR355C 303 nt-0.09□□□□□ -2.42
HIR3P47171 RRT7YLL030C 342 nt-0.09□□□□□ -2.42
HIR3P47171 YNR077CYNR077C 255 nt-0.1□□□□□ -2.43
HIR3P47171 VIK1YPL253C 1944 nt-0.1□□□□□ -2.43
HIR3P47171 YDL157CYDL157C 357 nt-0.11□□□□□ -2.43
HIR3P47171 YEL075CYEL075C 369 nt-0.11□□□□□ -2.43
HIR3P47171 YER189WYER189W 369 nt-0.11□□□□□ -2.43
HIR3P47171 YGR219WYGR219W 342 nt-0.12□□□□□ -2.43
HIR3P47171 EMC2YJR088C 879 nt-0.12□□□□□ -2.43
HIR3P47171 RPL37AYLR185W 267 nt-0.12□□□□□ -2.43
HIR3P47171 IRC14YOR135C 342 nt-0.12□□□□□ -2.43
HIR3P47171 RPC10YHR143W-A 213 nt-0.13□□□□□ -2.43
HIR3P47171 YOL013W-AYOL013W-A 192 nt-0.13□□□□□ -2.43
HIR3P47171 GPI2YPL076W 843 nt-0.13□□□□□ -2.43
HIR3P47171 YBR062CYBR062C 543 nt-0.13□□□□□ -2.43
HIR3P47171 NUR1YDL089W 1455 nt-0.13□□□□□ -2.43
HIR3P47171 snR190snR190 190 nt-0.13□□□□□ -2.43
HIR3P47171 IPI3YNL182C 1668 nt-0.14□□□□□ -2.43
HIR3P47171 TSA2YDR453C 591 nt-0.14□□□□□ -2.43
HIR3P47171 INP2YMR163C 2118 nt-0.16□□□□□ -2.43
HIR3P47171 SWS2YNL081C 432 nt-0.16□□□□□ -2.43
HIR3P47171 snR46snR46 197 nt-0.16□□□□□ -2.43
HIR3P47171 GLC7YER133W 939 nt-0.16□□□□□ -2.44
HIR3P47171 VMA7YGR020C 357 nt-0.16□□□□□ -2.44
HIR3P47171 YDR042CYDR042C 603 nt-0.17□□□□□ -2.44
HIR3P47171 YHL002C-AYHL002C-A 489 nt-0.17□□□□□ -2.44
HIR3P47171 SPT21YMR179W 2277 nt-0.18□□□□□ -2.44
HIR3P47171 PRM8YGL053W 714 nt-0.18□□□□□ -2.44
HIR3P47171 DSE2YHR143W 978 nt-0.18□□□□□ -2.44
HIR3P47171 CMC2YBL059C-A 330 nt-0.18□□□□□ -2.44
HIR3P47171 YNR034W-AYNR034W-A 297 nt-0.18□□□□□ -2.44
HIR3P47171 BFA1YJR053W 1725 nt-0.19□□□□□ -2.44
HIR3P47171 YCR016WYCR016W 873 nt-0.19□□□□□ -2.44
HIR3P47171 DIG2YDR480W 972 nt-0.19□□□□□ -2.44
HIR3P47171 SFM1YOR021C 642 nt-0.19□□□□□ -2.44
HIR3P47171 KAR3YPR141C 2190 nt-0.19□□□□□ -2.44
HIR3P47171 LAG1YHL003C 1236 nt-0.2□□□□□ -2.44
HIR3P47171 YBL028CYBL028C 321 nt-0.2□□□□□ -2.44
HIR3P47171 CTL1YMR180C 963 nt-0.2□□□□□ -2.44
HIR3P47171 FYV6YNL133C 522 nt-0.2□□□□□ -2.44
HIR3P47171 SMY1YKL079W 1971 nt-0.2□□□□□ -2.44
HIR3P47171 PRM9YAR031W 897 nt-0.2□□□□□ -2.44
HIR3P47171 POL4YCR014C 1749 nt-0.21□□□□□ -2.44
HIR3P47171 YMR31YFR049W 372 nt-0.21□□□□□ -2.44
HIR3P47171 GDS1YOR355W 1569 nt-0.22□□□□□ -2.44
HIR3P47171 RPL35BYDL136W 363 nt-0.22□□□□□ -2.44
HIR3P47171 RPL35AYDL191W 363 nt-0.22□□□□□ -2.44
HIR3P47171 YGL039WYGL039W 1047 nt-0.22□□□□□ -2.44
Retrieved 100 of 7,029 protein–RNA pairs in 9.7 ms