Protein–RNA interactions for Protein: P38902

RPB11, DNA-directed RNA polymerase II subunit RPB11, yeastyeast

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPB11P38902 MUD2YKL074C 1584 nt0.64□□□□□ -2.31
RPB11P38902 CDC27YBL084C 2277 nt0.64□□□□□ -2.31
RPB11P38902 SHS1YDL225W 1656 nt0.63□□□□□ -2.31
RPB11P38902 COG7YGL005C 840 nt0.63□□□□□ -2.31
RPB11P38902 HYR1YIR037W 492 nt0.63□□□□□ -2.31
RPB11P38902 PGA1YNL158W 597 nt0.63□□□□□ -2.31
RPB11P38902 YNL179CYNL179C 438 nt0.63□□□□□ -2.31
RPB11P38902 YPR142CYPR142C 564 nt0.63□□□□□ -2.31
RPB11P38902 YBP2YGL060W 1926 nt0.62□□□□□ -2.31
RPB11P38902 YDR250CYDR250C 276 nt0.62□□□□□ -2.31
RPB11P38902 GOS1YHL031C 672 nt0.62□□□□□ -2.31
RPB11P38902 YAL064WYAL064W 285 nt0.62□□□□□ -2.31
RPB11P38902 YLR302CYLR302C 363 nt0.62□□□□□ -2.31
RPB11P38902 YOL162WYOL162W 648 nt0.62□□□□□ -2.31
RPB11P38902 HHT1YBR010W 411 nt0.62□□□□□ -2.31
RPB11P38902 SEC1YDR164C 2175 nt0.62□□□□□ -2.31
RPB11P38902 SEC5YDR166C 2916 nt0.61□□□□□ -2.31
RPB11P38902 YER121WYER121W 345 nt0.61□□□□□ -2.31
RPB11P38902 YMR272W-AYMR272W-A 114 nt0.61□□□□□ -2.31
RPB11P38902 GRX8YLR364W 330 nt0.6□□□□□ -2.31
RPB11P38902 YBL029C-AYBL029C-A 285 nt0.6□□□□□ -2.31
RPB11P38902 TIM18YOR297C 579 nt0.6□□□□□ -2.31
RPB11P38902 BUD3YCL014W 4911 nt0.6□□□□□ -2.31
RPB11P38902 STB6YKL072W 2301 nt0.6□□□□□ -2.31
RPB11P38902 TMA20YER007C-A 546 nt0.59□□□□□ -2.31
RPB11P38902 RTR1YER139C 681 nt0.59□□□□□ -2.31
RPB11P38902 YAP3YHL009C 993 nt0.59□□□□□ -2.31
RPB11P38902 COX6YHR051W 447 nt0.59□□□□□ -2.31
RPB11P38902 ATP18YML081C-A 180 nt0.59□□□□□ -2.31
RPB11P38902 MGR1YCL044C 1254 nt0.59□□□□□ -2.31
RPB11P38902 YCS4YLR272C 3531 nt0.58□□□□□ -2.32
RPB11P38902 SLU7YDR088C 1149 nt0.58□□□□□ -2.32
RPB11P38902 YIR020CYIR020C 303 nt0.58□□□□□ -2.32
RPB11P38902 YJL127C-BYJL127C-B 159 nt0.58□□□□□ -2.32
RPB11P38902 RPC25YKL144C 639 nt0.58□□□□□ -2.32
RPB11P38902 YLR458WYLR458W 381 nt0.58□□□□□ -2.32
RPB11P38902 YET2YMR040W 483 nt0.58□□□□□ -2.32
RPB11P38902 YOL085W-AYOL085W-A 213 nt0.58□□□□□ -2.32
RPB11P38902 YOR161W-BYOR161W-B 261 nt0.58□□□□□ -2.32
RPB11P38902 NBL1YHR199C-A 222 nt0.57□□□□□ -2.32
RPB11P38902 RPL40BYKR094C 387 nt0.57□□□□□ -2.32
RPB11P38902 YMR031W-AYMR031W-A 327 nt0.57□□□□□ -2.32
RPB11P38902 YCR043CYCR043C 384 nt0.56□□□□□ -2.32
RPB11P38902 NHP2YDL208W 471 nt0.56□□□□□ -2.32
RPB11P38902 DUO1YGL061C 744 nt0.56□□□□□ -2.32
RPB11P38902 YGL217CYGL217C 342 nt0.56□□□□□ -2.32
RPB11P38902 NEJ1YLR265C 1029 nt0.56□□□□□ -2.32
RPB11P38902 CDC39YCR093W 6327 nt0.55□□□□□ -2.32
RPB11P38902 SWI4YER111C 3282 nt0.55□□□□□ -2.32
RPB11P38902 snR57snR57 88 nt0.55□□□□□ -2.32
RPB11P38902 TSA2YDR453C 591 nt0.55□□□□□ -2.32
RPB11P38902 BTN2YGR142W 1233 nt0.55□□□□□ -2.32
RPB11P38902 YIR020C-BYIR020C-B 735 nt0.55□□□□□ -2.32
RPB11P38902 PEP8YJL053W 1140 nt0.55□□□□□ -2.32
RPB11P38902 CCE1YKL011C 1062 nt0.55□□□□□ -2.32
RPB11P38902 YMR178WYMR178W 825 nt0.55□□□□□ -2.32
RPB11P38902 DIA1YMR316W 1011 nt0.55□□□□□ -2.32
RPB11P38902 SWS2YNL081C 432 nt0.55□□□□□ -2.32
RPB11P38902 YPR159C-AYPR159C-A 102 nt0.55□□□□□ -2.32
RPB11P38902 RAD50YNL250W 3939 nt0.55□□□□□ -2.32
RPB11P38902 RRI1YDL216C 1323 nt0.55□□□□□ -2.32
RPB11P38902 SLX4YLR135W 2247 nt0.54□□□□□ -2.32
RPB11P38902 YLL054CYLL054C 2532 nt0.54□□□□□ -2.32
RPB11P38902 SLD5YDR489W 885 nt0.54□□□□□ -2.32
RPB11P38902 PPE1YHR075C 1203 nt0.54□□□□□ -2.32
RPB11P38902 PFS1YHR185C 714 nt0.54□□□□□ -2.32
RPB11P38902 SFG1YOR315W 1041 nt0.54□□□□□ -2.32
RPB11P38902 AIM9YER080W 1884 nt0.53□□□□□ -2.32
RPB11P38902 snR83snR83 306 nt0.53□□□□□ -2.32
RPB11P38902 RSM28YDR494W 1086 nt0.53□□□□□ -2.32
RPB11P38902 VMA7YGR020C 357 nt0.53□□□□□ -2.32
RPB11P38902 RPL16AYIL133C 600 nt0.53□□□□□ -2.32
RPB11P38902 YBL083CYBL083C 426 nt0.53□□□□□ -2.32
RPB11P38902 ESA1YOR244W 1338 nt0.53□□□□□ -2.32
RPB11P38902 GPM2YDL021W 936 nt0.52□□□□□ -2.33
RPB11P38902 YDR521WYDR521W 336 nt0.52□□□□□ -2.33
RPB11P38902 MAM1YER106W 909 nt0.52□□□□□ -2.33
RPB11P38902 YFL012W-AYFL012W-A 375 nt0.52□□□□□ -2.33
RPB11P38902 RTT102YGR275W 474 nt0.52□□□□□ -2.33
RPB11P38902 YLR366WYLR366W 306 nt0.52□□□□□ -2.33
RPB11P38902 CMC4YMR194C-B 222 nt0.52□□□□□ -2.33
RPB11P38902 UTP13YLR222C 2454 nt0.52□□□□□ -2.33
RPB11P38902 YCR016WYCR016W 873 nt0.51□□□□□ -2.33
RPB11P38902 MZM1YDR493W 372 nt0.51□□□□□ -2.33
RPB11P38902 LAG1YHL003C 1236 nt0.51□□□□□ -2.33
RPB11P38902 YHL048C-AYHL048C-A 135 nt0.51□□□□□ -2.33
RPB11P38902 ABM1YJR108W 372 nt0.51□□□□□ -2.33
RPB11P38902 YNL010WYNL010W 726 nt0.51□□□□□ -2.33
RPB11P38902 YOL150CYOL150C 312 nt0.51□□□□□ -2.33
RPB11P38902 NDD1YOR372C 1665 nt0.51□□□□□ -2.33
RPB11P38902 YBR062CYBR062C 543 nt0.51□□□□□ -2.33
RPB11P38902 NOT5YPR072W 1683 nt0.51□□□□□ -2.33
RPB11P38902 UTP10YJL109C 5310 nt0.5□□□□□ -2.33
RPB11P38902 OSH6YKR003W 1347 nt0.5□□□□□ -2.33
RPB11P38902 PRM8YGL053W 714 nt0.5□□□□□ -2.33
RPB11P38902 URA10YMR271C 684 nt0.5□□□□□ -2.33
RPB11P38902 YOL024WYOL024W 519 nt0.5□□□□□ -2.33
RPB11P38902 APL3YBL037W 3078 nt0.5□□□□□ -2.33
RPB11P38902 SWT1YOR166C 1377 nt0.49□□□□□ -2.33
RPB11P38902 KAR9YPL269W 1935 nt0.49□□□□□ -2.33
Retrieved 100 of 7,029 protein–RNA pairs in 165.4 ms