Protein–RNA interactions for Protein: P38854

TDA11, Topoisomerase I damage affected protein 11, yeastyeast

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TDA11P38854 RNH70YGR276C 1662 nt1.69□□□□□ -2.14
TDA11P38854 YJL016WYJL016W 1686 nt1.69□□□□□ -2.14
TDA11P38854 FAB1YFR019W 6837 nt1.69□□□□□ -2.14
TDA11P38854 PLC1YPL268W 2610 nt1.69□□□□□ -2.14
TDA11P38854 FIG2YCR089W 4830 nt1.68□□□□□ -2.14
TDA11P38854 RKM1YPL208W 1752 nt1.68□□□□□ -2.14
TDA11P38854 YDL062WYDL062W 426 nt1.68□□□□□ -2.14
TDA11P38854 YFL012WYFL012W 447 nt1.68□□□□□ -2.14
TDA11P38854 SNO3YFL060C 669 nt1.68□□□□□ -2.14
TDA11P38854 VOA1YGR106C 798 nt1.68□□□□□ -2.14
TDA11P38854 SNO2YNL334C 669 nt1.68□□□□□ -2.14
TDA11P38854 YOR392WYOR392W 444 nt1.68□□□□□ -2.14
TDA11P38854 MDM32YOR147W 1869 nt1.68□□□□□ -2.14
TDA11P38854 YDL187CYDL187C 330 nt1.67□□□□□ -2.14
TDA11P38854 snR9snR9 187 nt1.67□□□□□ -2.14
TDA11P38854 YDR461C-AYDR461C-A 243 nt1.67□□□□□ -2.14
TDA11P38854 COX13YGL191W 390 nt1.67□□□□□ -2.14
TDA11P38854 SCEIQ0160 708 nt1.67□□□□□ -2.14
TDA11P38854 HSK3YKL138C-A 210 nt1.67□□□□□ -2.14
TDA11P38854 YLR031WYLR031W 561 nt1.67□□□□□ -2.14
TDA11P38854 YMR254CYMR254C 309 nt1.67□□□□□ -2.14
TDA11P38854 CSM4YPL200W 471 nt1.67□□□□□ -2.14
TDA11P38854 YPR172WYPR172W 603 nt1.67□□□□□ -2.14
TDA11P38854 RRI2YOL117W 1938 nt1.67□□□□□ -2.14
TDA11P38854 YMR045CYMR045C 5268 nt1.66□□□□□ -2.14
TDA11P38854 CRD1YDL142C 852 nt1.66□□□□□ -2.14
TDA11P38854 NCE101YJL205C 162 nt1.66□□□□□ -2.14
TDA11P38854 TIM8YJR135W-A 264 nt1.66□□□□□ -2.14
TDA11P38854 PHO80YOL001W 882 nt1.66□□□□□ -2.14
TDA11P38854 FYV12YOR183W 390 nt1.66□□□□□ -2.14
TDA11P38854 YPL080CYPL080C 327 nt1.66□□□□□ -2.14
TDA11P38854 HCS1YKL017C 2052 nt1.65□□□□□ -2.14
TDA11P38854 YEL018C-AYEL018C-A 534 nt1.65□□□□□ -2.15
TDA11P38854 YIL030W-AYIL030W-A 339 nt1.65□□□□□ -2.15
TDA11P38854 YIR020CYIR020C 303 nt1.65□□□□□ -2.15
TDA11P38854 RPA34YJL148W 702 nt1.65□□□□□ -2.15
TDA11P38854 YOL029CYOL029C 606 nt1.65□□□□□ -2.15
TDA11P38854 HSH155YMR288W 2916 nt1.65□□□□□ -2.15
TDA11P38854 CRM1YGR218W 3255 nt1.65□□□□□ -2.15
TDA11P38854 PET309YLR067C 2898 nt1.65□□□□□ -2.15
TDA11P38854 NUP82YJL061W 2142 nt1.64□□□□□ -2.15
TDA11P38854 ADR1YDR216W 3972 nt1.64□□□□□ -2.15
TDA11P38854 BTT1YDR252W 450 nt1.64□□□□□ -2.15
TDA11P38854 YER068C-AYER068C-A 432 nt1.64□□□□□ -2.15
TDA11P38854 NBP1YLR457C 960 nt1.64□□□□□ -2.15
TDA11P38854 RTC6YPL183W-A 282 nt1.64□□□□□ -2.15
TDA11P38854 YBR174CYBR174C 315 nt1.64□□□□□ -2.15
TDA11P38854 YBP1YBR216C 2025 nt1.64□□□□□ -2.15
TDA11P38854 CDC27YBL084C 2277 nt1.63□□□□□ -2.15
TDA11P38854 YFR009W-AYFR009W-A 258 nt1.63□□□□□ -2.15
TDA11P38854 PRP21YJL203W 843 nt1.63□□□□□ -2.15
TDA11P38854 YMR324CYMR324C 243 nt1.63□□□□□ -2.15
TDA11P38854 YPR096CYPR096C 303 nt1.63□□□□□ -2.15
TDA11P38854 KCS1YDR017C 3153 nt1.63□□□□□ -2.15
TDA11P38854 VMR1YHL035C 4779 nt1.63□□□□□ -2.15
TDA11P38854 PKH3YDR466W 2697 nt1.63□□□□□ -2.15
TDA11P38854 YJR039WYJR039W 3366 nt1.62□□□□□ -2.15
TDA11P38854 YDR042CYDR042C 603 nt1.62□□□□□ -2.15
TDA11P38854 YER175W-AYER175W-A 165 nt1.62□□□□□ -2.15
TDA11P38854 YGL069CYGL069C 465 nt1.62□□□□□ -2.15
TDA11P38854 TIM10YHR005C-A 282 nt1.62□□□□□ -2.15
TDA11P38854 CSI1YMR025W 888 nt1.62□□□□□ -2.15
TDA11P38854 CYB5YNL111C 363 nt1.62□□□□□ -2.15
TDA11P38854 APM3YBR288C 1452 nt1.62□□□□□ -2.15
TDA11P38854 DNF3YMR162C 4971 nt1.61□□□□□ -2.15
TDA11P38854 HIR3YJR140C 4947 nt1.61□□□□□ -2.15
TDA11P38854 YDR194W-AYDR194W-A 153 nt1.61□□□□□ -2.15
TDA11P38854 MZM1YDR493W 372 nt1.61□□□□□ -2.15
TDA11P38854 SYM1YLR251W 594 nt1.61□□□□□ -2.15
TDA11P38854 SNC2YOR327C 348 nt1.61□□□□□ -2.15
TDA11P38854 BI4Q0120 1917 nt1.61□□□□□ -2.15
TDA11P38854 NAM7YMR080C 2916 nt1.61□□□□□ -2.15
TDA11P38854 YJR098CYJR098C 1971 nt1.61□□□□□ -2.15
TDA11P38854 VPS15YBR097W 4365 nt1.61□□□□□ -2.15
TDA11P38854 REF2YDR195W 1602 nt1.6□□□□□ -2.15
TDA11P38854 BNA7YDR428C 786 nt1.6□□□□□ -2.15
TDA11P38854 YBL029C-AYBL029C-A 285 nt1.6□□□□□ -2.15
TDA11P38854 SWS2YNL081C 432 nt1.6□□□□□ -2.15
TDA11P38854 YDR210W-AYDR210W-A 1317 nt1.6□□□□□ -2.15
TDA11P38854 YOR343W-AYOR343W-A 1317 nt1.6□□□□□ -2.15
TDA11P38854 MYO4YAL029C 4416 nt1.6□□□□□ -2.15
TDA11P38854 BRR2YER172C 6492 nt1.59□□□□□ -2.15
TDA11P38854 YDL068WYDL068W 330 nt1.59□□□□□ -2.15
TDA11P38854 CHZ1YER030W 462 nt1.59□□□□□ -2.15
TDA11P38854 YGL015CYGL015C 393 nt1.59□□□□□ -2.15
TDA11P38854 PGA1YNL158W 597 nt1.59□□□□□ -2.15
TDA11P38854 SPC29YPL124W 762 nt1.59□□□□□ -2.15
TDA11P38854 PET127YOR017W 2403 nt1.59□□□□□ -2.16
TDA11P38854 PMD1YER132C 5262 nt1.59□□□□□ -2.16
TDA11P38854 RPH1YER169W 2391 nt1.58□□□□□ -2.16
TDA11P38854 SOK2YMR016C 2358 nt1.58□□□□□ -2.16
TDA11P38854 KIP1YBL063W 3336 nt1.58□□□□□ -2.16
TDA11P38854 LRP1YHR081W 555 nt1.58□□□□□ -2.16
TDA11P38854 AIM18YHR198C 966 nt1.58□□□□□ -2.16
TDA11P38854 YLR271WYLR271W 825 nt1.58□□□□□ -2.16
TDA11P38854 YNL146C-AYNL146C-A 195 nt1.58□□□□□ -2.16
TDA11P38854 MUD2YKL074C 1584 nt1.58□□□□□ -2.16
TDA11P38854 AFR1YDR085C 1863 nt1.58□□□□□ -2.16
TDA11P38854 SBE22YHR103W 2559 nt1.57□□□□□ -2.16
TDA11P38854 RIC1YLR039C 3171 nt1.57□□□□□ -2.16
Retrieved 100 of 7,029 protein–RNA pairs in 67.1 ms