Protein–RNA interactions for Protein: P09007

SRD1, Pre-rRNA-processing protein SRD1, yeastyeast

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SRD1P09007 tW(CCA)JtW(CCA)J 72 nt2.93□□□□□ -1.94
SRD1P09007 tW(CCA)KtW(CCA)K 72 nt2.93□□□□□ -1.94
SRD1P09007 tW(CCA)MtW(CCA)M 72 nt2.93□□□□□ -1.94
SRD1P09007 tW(CCA)PtW(CCA)P 72 nt2.93□□□□□ -1.94
SRD1P09007 PHD1YKL043W 1101 nt2.93□□□□□ -1.94
SRD1P09007 CRS5YOR031W 210 nt2.93□□□□□ -1.94
SRD1P09007 YPR146CYPR146C 330 nt2.93□□□□□ -1.94
SRD1P09007 PTC5YOR090C 1719 nt2.93□□□□□ -1.94
SRD1P09007 SIN3YOL004W 4611 nt2.92□□□□□ -1.94
SRD1P09007 NCL1YBL024W 2055 nt2.92□□□□□ -1.94
SRD1P09007 YDL025W-AYDL025W-A 105 nt2.92□□□□□ -1.94
SRD1P09007 UBP11YKR098C 2154 nt2.92□□□□□ -1.94
SRD1P09007 YGR067CYGR067C 2415 nt2.92□□□□□ -1.94
SRD1P09007 PCF11YDR228C 1881 nt2.92□□□□□ -1.94
SRD1P09007 SAK1YER129W 3429 nt2.91□□□□□ -1.94
SRD1P09007 IPT1YDR072C 1584 nt2.91□□□□□ -1.94
SRD1P09007 REV1YOR346W 2958 nt2.91□□□□□ -1.94
SRD1P09007 SDC25YLL016W 3147 nt2.91□□□□□ -1.94
SRD1P09007 BCK1YJL095W 4437 nt2.91□□□□□ -1.94
SRD1P09007 SWT1YOR166C 1377 nt2.91□□□□□ -1.94
SRD1P09007 snR70snR70 164 nt2.91□□□□□ -1.94
SRD1P09007 NHP2YDL208W 471 nt2.91□□□□□ -1.94
SRD1P09007 YJL202CYJL202C 348 nt2.91□□□□□ -1.94
SRD1P09007 LSM7YNL147W 348 nt2.91□□□□□ -1.94
SRD1P09007 YOR050CYOR050C 348 nt2.91□□□□□ -1.94
SRD1P09007 FMP23YBR047W 528 nt2.91□□□□□ -1.94
SRD1P09007 KAR3YPR141C 2190 nt2.91□□□□□ -1.94
SRD1P09007 RLI1YDR091C 1827 nt2.91□□□□□ -1.94
SRD1P09007 MPH1YIR002C 2982 nt2.91□□□□□ -1.94
SRD1P09007 YDR413CYDR413C 576 nt2.9□□□□□ -1.95
SRD1P09007 DLS1YJL065C 504 nt2.9□□□□□ -1.95
SRD1P09007 IRC23YOR044W 474 nt2.9□□□□□ -1.95
SRD1P09007 TIM18YOR297C 579 nt2.9□□□□□ -1.95
SRD1P09007 AXL1YPR122W 3627 nt2.89□□□□□ -1.95
SRD1P09007 YDR102CYDR102C 333 nt2.89□□□□□ -1.95
SRD1P09007 GRX8YLR364W 330 nt2.89□□□□□ -1.95
SRD1P09007 RPL36AYMR194W 303 nt2.89□□□□□ -1.95
SRD1P09007 YBL065WYBL065W 345 nt2.89□□□□□ -1.95
SRD1P09007 YBL073WYBL073W 312 nt2.89□□□□□ -1.95
SRD1P09007 YJL070CYJL070C 2667 nt2.88□□□□□ -1.95
SRD1P09007 RIF1YBR275C 5751 nt2.88□□□□□ -1.95
SRD1P09007 SNU114YKL173W 3027 nt2.88□□□□□ -1.95
SRD1P09007 YDR008CYDR008C 351 nt2.88□□□□□ -1.95
SRD1P09007 YER097WYER097W 330 nt2.88□□□□□ -1.95
SRD1P09007 LSO2YGR169C-A 279 nt2.88□□□□□ -1.95
SRD1P09007 YIL174WYIL174W 228 nt2.88□□□□□ -1.95
SRD1P09007 YJL222W-AYJL222W-A 228 nt2.88□□□□□ -1.95
SRD1P09007 RPL26AYLR344W 384 nt2.88□□□□□ -1.95
SRD1P09007 PGA1YNL158W 597 nt2.88□□□□□ -1.95
SRD1P09007 CDC20YGL116W 1833 nt2.88□□□□□ -1.95
SRD1P09007 ECM29YHL030W 5607 nt2.87□□□□□ -1.95
SRD1P09007 RGA2YDR379W 3030 nt2.87□□□□□ -1.95
SRD1P09007 WIP1YDR374W-A 270 nt2.87□□□□□ -1.95
SRD1P09007 RPS22AYJL190C 393 nt2.87□□□□□ -1.95
SRD1P09007 ISF1YMR081C 1017 nt2.87□□□□□ -1.95
SRD1P09007 HRD3YLR207W 2502 nt2.87□□□□□ -1.95
SRD1P09007 SEC26YDR238C 2922 nt2.86□□□□□ -1.95
SRD1P09007 FKS3YMR306W 5358 nt2.86□□□□□ -1.95
SRD1P09007 YGL239CYGL239C 315 nt2.86□□□□□ -1.95
SRD1P09007 YHR032W-AYHR032W-A 180 nt2.86□□□□□ -1.95
SRD1P09007 tW(UCA)QtW(UCA)Q 74 nt2.86□□□□□ -1.95
SRD1P09007 YOR231C-AYOR231C-A 201 nt2.86□□□□□ -1.95
SRD1P09007 PDR3YBL005W 2931 nt2.86□□□□□ -1.95
SRD1P09007 RPO41YFL036W 4056 nt2.86□□□□□ -1.95
SRD1P09007 NFT1YKR103W 3657 nt2.86□□□□□ -1.95
SRD1P09007 PTP3YER075C 2787 nt2.85□□□□□ -1.95
SRD1P09007 RRP12YPL012W 3687 nt2.85□□□□□ -1.95
SRD1P09007 FMP16YDR070C 282 nt2.85□□□□□ -1.95
SRD1P09007 DAD4YDR320C-A 219 nt2.85□□□□□ -1.95
SRD1P09007 YGL024WYGL024W 336 nt2.85□□□□□ -1.95
SRD1P09007 TWF1YGR080W 999 nt2.85□□□□□ -1.95
SRD1P09007 RTC6YPL183W-A 282 nt2.85□□□□□ -1.95
SRD1P09007 snR43snR43 209 nt2.85□□□□□ -1.95
SRD1P09007 VPS16YPL045W 2397 nt2.85□□□□□ -1.95
SRD1P09007 UTP14YML093W 2700 nt2.84□□□□□ -1.95
SRD1P09007 NEW1YPL226W 3591 nt2.84□□□□□ -1.95
SRD1P09007 AIM9YER080W 1884 nt2.84□□□□□ -1.95
SRD1P09007 YLR278CYLR278C 4026 nt2.84□□□□□ -1.95
SRD1P09007 SGD1YLR336C 2700 nt2.84□□□□□ -1.95
SRD1P09007 RPS24AYER074W 408 nt2.84□□□□□ -1.95
SRD1P09007 YGR174W-AYGR174W-A 87 nt2.84□□□□□ -1.95
SRD1P09007 YIL066W-AYIL066W-A 444 nt2.84□□□□□ -1.95
SRD1P09007 SLN1YIL147C 3663 nt2.84□□□□□ -1.96
SRD1P09007 YBT1YLL048C 4986 nt2.83□□□□□ -1.96
SRD1P09007 RPN1YHR027C 2982 nt2.83□□□□□ -1.96
SRD1P09007 SUL1YBR294W 2580 nt2.83□□□□□ -1.96
SRD1P09007 SEC7YDR170C 6030 nt2.83□□□□□ -1.96
SRD1P09007 CYR1YJL005W 6081 nt2.83□□□□□ -1.96
SRD1P09007 RPL14BYHL001W 417 nt2.83□□□□□ -1.96
SRD1P09007 YAL042C-AYAL042C-A 378 nt2.83□□□□□ -1.96
SRD1P09007 YBR121C-AYBR121C-A 159 nt2.83□□□□□ -1.96
SRD1P09007 NAB6YML117W 3405 nt2.83□□□□□ -1.96
SRD1P09007 SOK2YMR016C 2358 nt2.83□□□□□ -1.96
SRD1P09007 YDR186CYDR186C 2634 nt2.83□□□□□ -1.96
SRD1P09007 MOT1YPL082C 5604 nt2.83□□□□□ -1.96
SRD1P09007 snR65snR65 100 nt2.82□□□□□ -1.96
SRD1P09007 QCR7YDR529C 384 nt2.82□□□□□ -1.96
SRD1P09007 YFL032WYFL032W 321 nt2.82□□□□□ -1.96
SRD1P09007 PNC1YGL037C 651 nt2.82□□□□□ -1.96
SRD1P09007 YJL020W-AYJL020W-A 258 nt2.82□□□□□ -1.96
Retrieved 100 of 7,029 protein–RNA pairs in 87.2 ms